RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 TBC1D9Q6ZT07 1266 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 USP50Q70EL3 339 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-206ENST00000461574 RNF135Q8IUD6 432 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 NIM1KQ8IY84 436 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 C7orf43Q8WVR3 580 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 RPGRQ92834 1020 aaKnown RBP6.73□□□□□ -1.33
BRCA1-206ENST00000461574 PSMD1Q99460 953 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 ZCCHC2Q9C0B9 1178 aaKnown RBP6.73□□□□□ -1.33
BRCA1-206ENST00000461574 MCOLN1Q9GZU1 580 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 ZNF408Q9H9D4 720 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 HCN2Q9UL51 889 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 NUP98P52948 1817 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 CELF2O95319 508 aaKnown RBP6.72□□□□□ -1.33
BRCA1-206ENST00000461574 HSPA5P11021 654 aaKnown RBP6.72□□□□□ -1.33
BRCA1-206ENST00000461574 EPS15P42566 896 aa6.72□□□□□ -1.33
BRCA1-206ENST00000461574 FMR1Q06787 632 aaKnown RBP eCLIP6.72□□□□□ -1.33
BRCA1-206ENST00000461574 PCDHGC4Q9Y5F7 938 aa6.72□□□□□ -1.33
BRCA1-206ENST00000461574 AKAP11Q9UKA4 1901 aa6.72□□□□□ -1.33
BRCA1-206ENST00000461574 COL4A5P29400 1685 aa6.71□□□□□ -1.33
BRCA1-206ENST00000461574 C1QTNF9BB2RNN3 333 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 GNB5O14775 395 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 TCERG1O14776 1098 aaKnown RBP6.71□□□□□ -1.34
BRCA1-206ENST00000461574 PPIP5K2O43314 1243 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 INHAP05111 366 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 ARAFP10398 606 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 DGKGP49619 791 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 GDF10P55107 478 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 CNGB1Q14028 1251 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-206ENST00000461574 FIGNL1Q6PIW4 674 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 IL17REQ8NFR9 667 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 NYXQ9GZU5 481 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 ADARB2Q9NS39 739 aaKnown RBP6.71□□□□□ -1.34
BRCA1-206ENST00000461574 TIMELESSQ9UNS1 1208 aa6.71□□□□□ -1.34
BRCA1-206ENST00000461574 KLRG2A4D1S0 409 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-206ENST00000461574 ATXN7O15265 892 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-206ENST00000461574 KCNQ3O43525 872 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 SNRPA1P09661 255 aaKnown RBP6.7□□□□□ -1.34
BRCA1-206ENST00000461574 SOX10P56693 466 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 VAC14Q08AM6 782 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 NOGQ13253 232 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 CC2D1BQ5T0F9 858 aaKnown RBP6.7□□□□□ -1.34
BRCA1-206ENST00000461574 CST9Q5W186 159 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 CIAPIN1Q6FI81 312 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 KIF6Q6ZMV9 814 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 SAPCD2Q86UD0 394 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 CD163Q86VB7 1156 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 NLRP8Q86W28 1048 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 NGEFQ8N5V2 710 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 C1orf216Q8TAB5 229 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 RTF1Q92541 710 aaKnown RBP6.7□□□□□ -1.34
BRCA1-206ENST00000461574 NIFKQ9BYG3 293 aaKnown RBP6.7□□□□□ -1.34
BRCA1-206ENST00000461574 GLIS2Q9BZE0 524 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-206ENST00000461574 KLF15Q9UIH9 416 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 USP16Q9Y5T5 823 aa6.7□□□□□ -1.34
BRCA1-206ENST00000461574 ABCC12Q96J65 1359 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 A0A1W2PNR3 127 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 DCDC2BA2VCK2 349 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 PRAMEF22A3QJZ6 481 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 CHRNA4P43681 627 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 SMTNP53814 917 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 AOC3Q16853 763 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 RBM17Q96I25 401 aaKnown RBP6.69□□□□□ -1.34
BRCA1-206ENST00000461574 HHIPL1Q96JK4 782 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 BCL2L13Q9BXK5 485 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 GPRC5DQ9NZD1 345 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 CEMIPQ8WUJ3 1361 aa6.69□□□□□ -1.34
BRCA1-206ENST00000461574 SNED1Q8TER0 1413 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 COL3A1P02461 1466 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-206ENST00000461574 PIK3R2O00459 728 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 MAPTP10636 758 aaKnown RBP6.68□□□□□ -1.34
BRCA1-206ENST00000461574 CD33P20138 364 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 GPTP24298 496 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 PRKAR2BP31323 418 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 GMPSP49915 693 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-206ENST00000461574 HUNKP57058 714 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 TNP2Q05952 138 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 HLFQ16534 295 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 CRY2Q49AN0 593 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 TPRNQ4KMQ1 711 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 ARSJQ5FYB0 599 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-206ENST00000461574 CHSY3Q70JA7 882 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 CDC37L1Q7L3B6 337 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 ZNF295-AS1Q8N0V1 137 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 Q8N3U1 123 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 SUPT20HQ8NEM7 779 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 SERTAD1Q9UHV2 236 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 USP3Q9Y6I4 520 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 NPC1L1Q9UHC9 1359 aa6.68□□□□□ -1.34
BRCA1-206ENST00000461574 RIC1Q4ADV7 1423 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 LAMB2P55268 1798 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 ANKRD36CQ5JPF3 1778 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 RAD17O75943 681 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 ADH6P28332 368 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 TNIP1Q15025 636 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 DPP8Q6V1X1 898 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-206ENST00000461574 MCM10Q7L590 875 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 FCHSD1Q86WN1 690 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 PLPP7Q8NBV4 271 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 CFAP53Q96M91 514 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 CRAMP1Q96RY5 1269 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms