RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 ATRNL1Q5VV63 1379 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 MAST2Q6P0Q8 1798 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 FAM196BA6NMK8 535 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 SLURP2P0DP57 97 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 PSMA5P28066 241 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 CDK8P49336 464 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 SUPT20HL1Q3ZLR7 823 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 NBPF12Q5TAG4 269 aaPredicted RBP11.57□□□□□ -0.56
C9orf78-203ENST00000461539 DLK2Q6UY11 383 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 STOX1Q6ZVD7 989 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 C16orf86Q6ZW13 317 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 MIGA2Q7L4E1 593 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 RALYLQ86SE5 291 aaKnown RBP11.57□□□□□ -0.56
C9orf78-203ENST00000461539 STAG1Q8WVM7 1258 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 HOOK2Q96ED9 719 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 JAKMIP1Q96N16 626 aaKnown RBP11.57□□□□□ -0.56
C9orf78-203ENST00000461539 EHD4Q9H223 541 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.57□□□□□ -0.56
C9orf78-203ENST00000461539 ZNF287Q9HBT7 754 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 SWAP70Q9UH65 585 aa11.57□□□□□ -0.56
C9orf78-203ENST00000461539 DOCK2Q92608 1830 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 RANBP6O60518 1105 aaKnown RBP11.56□□□□□ -0.56
C9orf78-203ENST00000461539 PCP11498 1178 aaKnown RBP11.56□□□□□ -0.56
C9orf78-203ENST00000461539 GABPAQ06546 454 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 ADCK5Q3MIX3 580 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 ZNF444Q8N0Y2 327 aaPredicted RBP11.56□□□□□ -0.56
C9orf78-203ENST00000461539 NCOA7Q8NI08 942 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 CDCA5Q96FF9 252 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 NEK1Q96PY6 1258 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 KRT23Q9C075 422 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 CNNM2Q9H8M5 875 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 HERC5Q9UII4 1024 aaKnown RBP11.56□□□□□ -0.56
C9orf78-203ENST00000461539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.56□□□□□ -0.56
C9orf78-203ENST00000461539 TACC3Q9Y6A5 838 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 NEDD4P46934 1319 aa11.56□□□□□ -0.56
C9orf78-203ENST00000461539 ROBO3Q96MS0 1386 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 B4E1Z4 1266 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 ORC4O43929 436 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 CASTP20810 708 aaKnown RBP11.55□□□□□ -0.56
C9orf78-203ENST00000461539 NF2P35240 595 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 PRKG1Q13976 671 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 DCAF15Q66K64 600 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 BLOC1S2Q6QNY1 142 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 ESR2Q92731 530 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 UPF3BQ9BZI7 483 aaKnown RBP11.55□□□□□ -0.56
C9orf78-203ENST00000461539 DNAJC18Q9H819 358 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 COL2A1P02458 1487 aaPredicted RBP11.55□□□□□ -0.56
C9orf78-203ENST00000461539 SBF1O95248 1867 aa11.55□□□□□ -0.56
C9orf78-203ENST00000461539 TSPY2A6NKD2 308 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 TRAF5O00463 557 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 KIF3CO14782 793 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 TBC1D12O60347 775 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 KDM4AO75164 1064 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 FGRP09769 529 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 SHMT1P34896 483 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 CERKLQ49MI3 558 aaPredicted RBP11.54□□□□□ -0.56
C9orf78-203ENST00000461539 FAM47AQ5JRC9 791 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 METTL16Q86W50 562 aaKnown RBP11.54□□□□□ -0.56
C9orf78-203ENST00000461539 ZNF341Q9BYN7 854 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 ZNF408Q9H9D4 720 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 TAOK2Q9UL54 1235 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 CYP46A1Q9Y6A2 500 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 WDR90Q96KV7 1748 aa11.54□□□□□ -0.56
C9orf78-203ENST00000461539 ZNF646O15015 1829 aaPredicted RBP11.53□□□□□ -0.56
C9orf78-203ENST00000461539 MPHOSPH10O00566 681 aaKnown RBP11.53□□□□□ -0.56
C9orf78-203ENST00000461539 PPP1R12BO60237 982 aaPredicted RBP11.53□□□□□ -0.56
C9orf78-203ENST00000461539 HMGB1P09429 215 aaKnown RBP11.53□□□□□ -0.56
C9orf78-203ENST00000461539 TSPY3P0CV98 308 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 TSPY8P0CW00 308 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 CPA1P15085 419 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 AKR1B1P15121 316 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 RASA1P20936 1047 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 TFAP4Q01664 338 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 TTLL12Q14166 644 aaPredicted RBP11.53□□□□□ -0.56
C9orf78-203ENST00000461539 RABEP1Q15276 862 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 TATDN1Q6P1N9 297 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 DHX32Q7L7V1 743 aaKnown RBP11.53□□□□□ -0.56
C9orf78-203ENST00000461539 CHST3Q7LGC8 479 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 MB21D2Q8IYB1 491 aaPredicted RBP11.53□□□□□ -0.56
C9orf78-203ENST00000461539 ZNF784Q8NCA9 323 aaPredicted RBP11.53□□□□□ -0.56
C9orf78-203ENST00000461539 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 CCDC17Q96LX7 622 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 KIF2CQ99661 725 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 TM6SF1Q9BZW5 370 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 ZSWIM5Q9P217 1185 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 UTRNP46939 3433 aa11.53□□□□□ -0.56
C9orf78-203ENST00000461539 MYH13Q9UKX3 1938 aa11.52□□□□□ -0.56
C9orf78-203ENST00000461539 DICER1Q9UPY3 1922 aaKnown RBP11.52□□□□□ -0.56
C9orf78-203ENST00000461539 ADAMTSL1Q8N6G6 1762 aa11.52□□□□□ -0.57
C9orf78-203ENST00000461539 PSME4Q14997 1843 aa11.52□□□□□ -0.57
C9orf78-203ENST00000461539 PRC1O43663 620 aa11.52□□□□□ -0.57
C9orf78-203ENST00000461539 GDF11O95390 407 aa11.52□□□□□ -0.57
C9orf78-203ENST00000461539 RPS6KB1P23443 525 aa11.52□□□□□ -0.57
C9orf78-203ENST00000461539 MCM5P33992 734 aa11.52□□□□□ -0.57
C9orf78-203ENST00000461539 NT5C2P49902 561 aa11.52□□□□□ -0.57
C9orf78-203ENST00000461539 NEK4P51957 841 aa11.52□□□□□ -0.57
C9orf78-203ENST00000461539 FGD1P98174 961 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms