RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 HMGCRP04035 888 aa18■□□□□ 0.47
DNMT3A-207ENST00000461228 MECOMQ03112 1051 aa18■□□□□ 0.47
DNMT3A-207ENST00000461228 SH3D19Q5HYK7 790 aa18■□□□□ 0.47
DNMT3A-207ENST00000461228 GADL1Q6ZQY3 521 aa18■□□□□ 0.47
DNMT3A-207ENST00000461228 ERICH6Q7L0X2 663 aa18■□□□□ 0.47
DNMT3A-207ENST00000461228 ZNF384Q8TF68 577 aa18■□□□□ 0.47
DNMT3A-207ENST00000461228 GINM1Q9NU53 330 aa18■□□□□ 0.47
DNMT3A-207ENST00000461228 BIN2Q9UBW5 565 aaPredicted RBP18■□□□□ 0.47
DNMT3A-207ENST00000461228 TRIM75PA6NK02 468 aa17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 LDHCP07864 332 aa17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 GPR153Q6NV75 609 aa17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 ZNF280CQ8ND82 737 aa17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 NSUN4Q96CB9 384 aaKnown RBP17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 XAGE2Q96GT9 111 aa17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 MEIS3Q99687 375 aa17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 MORF4L1Q9UBU8 362 aa17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 ABCF2Q9UG63 623 aa17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 PA2G4Q9UQ80 394 aaKnown RBP17.99■□□□□ 0.47
DNMT3A-207ENST00000461228 ZNF236Q9UL36 1845 aa17.98■□□□□ 0.47
DNMT3A-207ENST00000461228 DHX36Q9H2U1 1008 aaKnown RBP17.98■□□□□ 0.47
DNMT3A-207ENST00000461228 A0A0C4DFX4 3053 aa17.97■□□□□ 0.47
DNMT3A-207ENST00000461228 SRGAP3O43295 1099 aa17.97■□□□□ 0.47
DNMT3A-207ENST00000461228 CAP2P40123 477 aa17.97■□□□□ 0.47
DNMT3A-207ENST00000461228 METTL16Q86W50 562 aaKnown RBP17.97■□□□□ 0.47
DNMT3A-207ENST00000461228 SPATA5Q8NB90 893 aa17.97■□□□□ 0.47
DNMT3A-207ENST00000461228 AS3MTQ9HBK9 375 aa17.97■□□□□ 0.47
DNMT3A-207ENST00000461228 HMG20BQ9P0W2 317 aa17.97■□□□□ 0.47
DNMT3A-207ENST00000461228 NOB1Q9ULX3 412 aaKnown RBP17.97■□□□□ 0.47
DNMT3A-207ENST00000461228 MYO5AQ9Y4I1 1855 aaKnown RBP17.97■□□□□ 0.47
DNMT3A-207ENST00000461228 EVI5O60447 810 aa17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 ELNP15502 786 aa17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 PICALMQ13492 652 aa17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 TREML2Q5T2D2 321 aa17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 ANKRD13CQ8N6S4 541 aa17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 GTF3C2Q8WUA4 911 aaPredicted RBP17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 SOCS4Q8WXH5 440 aa17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 WDR18Q9BV38 432 aa17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 MYH1P12882 1939 aa17.96■□□□□ 0.47
DNMT3A-207ENST00000461228 ASNSP08243 561 aa17.95■□□□□ 0.46
DNMT3A-207ENST00000461228 PLCG2P16885 1265 aa17.95■□□□□ 0.46
DNMT3A-207ENST00000461228 BMP8BP34820 402 aa17.95■□□□□ 0.46
DNMT3A-207ENST00000461228 TMED8Q6PL24 325 aaPredicted RBP17.95■□□□□ 0.46
DNMT3A-207ENST00000461228 NECAB2Q7Z6G3 386 aa17.95■□□□□ 0.46
DNMT3A-207ENST00000461228 DEFB118Q96PH6 123 aa17.95■□□□□ 0.46
DNMT3A-207ENST00000461228 GPR108Q9NPR9 543 aa17.95■□□□□ 0.46
DNMT3A-207ENST00000461228 RPTORQ8N122 1335 aa17.95■□□□□ 0.46
DNMT3A-207ENST00000461228 USP17L5A8MUK1 530 aa17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 UQCRFS1P1P0C7P4 283 aa17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 XRCC5P13010 732 aaKnown RBP17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 HOXA7P31268 230 aaPredicted RBP17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 TIMM10P62072 90 aa17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 TFCP2Q12800 502 aa17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 MAP3K21Q5TCX8 1036 aa17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 CERS3Q8IU89 383 aa17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 TRMT44Q8IYL2 757 aaKnown RBP17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 CDCA7LQ96GN5 454 aa17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 ZNF512BQ96KM6 892 aaPredicted RBP17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 PI4KBQ9UBF8 816 aa17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 A0A0G2JMZ2 1700 aa17.94■□□□□ 0.46
DNMT3A-207ENST00000461228 ASCC2Q9H1I8 757 aaPredicted RBP17.93■□□□□ 0.46
DNMT3A-207ENST00000461228 UNC80Q8N2C7 3258 aa17.92■□□□□ 0.46
DNMT3A-207ENST00000461228 DNAH12Q6ZR08 3092 aa17.92■□□□□ 0.46
DNMT3A-207ENST00000461228 HMGCS2P54868 508 aa17.92■□□□□ 0.46
DNMT3A-207ENST00000461228 SPP2Q13103 211 aa17.92■□□□□ 0.46
DNMT3A-207ENST00000461228 GDF15Q99988 308 aa17.92■□□□□ 0.46
DNMT3A-207ENST00000461228 GJD2Q9UKL4 321 aa17.92■□□□□ 0.46
DNMT3A-207ENST00000461228 LAMA2P24043 3122 aaKnown RBP17.92■□□□□ 0.46
DNMT3A-207ENST00000461228 NAV1Q8NEY1 1877 aa17.92■□□□□ 0.46
DNMT3A-207ENST00000461228 C19orf81C9J6K1 198 aa17.91■□□□□ 0.46
DNMT3A-207ENST00000461228 BAG3O95817 575 aa17.91■□□□□ 0.46
DNMT3A-207ENST00000461228 TFRCP02786 760 aaKnown RBP17.91■□□□□ 0.46
DNMT3A-207ENST00000461228 MCAMP43121 646 aa17.91■□□□□ 0.46
DNMT3A-207ENST00000461228 BACE1P56817 501 aa17.91■□□□□ 0.46
DNMT3A-207ENST00000461228 PPP4CP60510 307 aa17.91■□□□□ 0.46
DNMT3A-207ENST00000461228 TEX11Q8IYF3 940 aa17.91■□□□□ 0.46
DNMT3A-207ENST00000461228 HMX1Q9NP08 348 aaPredicted RBP17.91■□□□□ 0.46
DNMT3A-207ENST00000461228 OGDHLQ9ULD0 1010 aa17.91■□□□□ 0.46
DNMT3A-207ENST00000461228 IPO8O15397 1037 aaKnown RBP17.9■□□□□ 0.46
DNMT3A-207ENST00000461228 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
DNMT3A-207ENST00000461228 GNAI2P04899 355 aa17.9■□□□□ 0.46
DNMT3A-207ENST00000461228 PAWRQ96IZ0 340 aaKnown RBP17.9■□□□□ 0.46
DNMT3A-207ENST00000461228 NOL10Q9BSC4 688 aaKnown RBP17.9■□□□□ 0.46
DNMT3A-207ENST00000461228 NBPF3Q9H094 633 aa17.9■□□□□ 0.46
DNMT3A-207ENST00000461228 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.9■□□□□ 0.46
DNMT3A-207ENST00000461228 FLT1P17948 1338 aa17.9■□□□□ 0.46
DNMT3A-207ENST00000461228 TRIM27P14373 513 aa17.89■□□□□ 0.45
DNMT3A-207ENST00000461228 MAPK4P31152 587 aa17.89■□□□□ 0.45
DNMT3A-207ENST00000461228 IRX3P78415 501 aaPredicted RBP17.89■□□□□ 0.45
DNMT3A-207ENST00000461228 LRIT3Q3SXY7 679 aa17.89■□□□□ 0.45
DNMT3A-207ENST00000461228 GORABQ5T7V8 394 aa17.89■□□□□ 0.45
DNMT3A-207ENST00000461228 PI16Q6UXB8 463 aa17.89■□□□□ 0.45
DNMT3A-207ENST00000461228 DNAJC18Q9H819 358 aa17.89■□□□□ 0.45
DNMT3A-207ENST00000461228 RAI14Q9P0K7 980 aa17.89■□□□□ 0.45
DNMT3A-207ENST00000461228 FAM196BA6NMK8 535 aa17.88■□□□□ 0.45
DNMT3A-207ENST00000461228 MNX1P50219 401 aaPredicted RBP17.88■□□□□ 0.45
DNMT3A-207ENST00000461228 MTMR2Q13614 643 aa17.88■□□□□ 0.45
DNMT3A-207ENST00000461228 ATF7IPQ6VMQ6 1270 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms