RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 KLF15Q9UIH9 416 aa6.27□□□□□ -1.41
CNN3-204ENST00000461018 GPC6Q9Y625 555 aaPredicted RBP6.27□□□□□ -1.41
CNN3-204ENST00000461018 CUL9Q8IWT3 2517 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 LOC102724428A0A0B4J2F2 783 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 SPDYE3A6NKU9 549 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 IGFBP4P22692 258 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 SIK1P57059 783 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 SPEM2Q0P670 501 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 FOXD4L6Q3SYB3 417 aaPredicted RBP6.26□□□□□ -1.41
CNN3-204ENST00000461018 TRAPPC3LQ5T215 181 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 ZNF468Q5VIY5 522 aaPredicted RBP6.26□□□□□ -1.41
CNN3-204ENST00000461018 FOXD4L3Q6VB84 417 aaPredicted RBP6.26□□□□□ -1.41
CNN3-204ENST00000461018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.26□□□□□ -1.41
CNN3-204ENST00000461018 PRIMPOLQ96LW4 560 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 TAF1DQ9H5J8 278 aaPredicted RBP6.26□□□□□ -1.41
CNN3-204ENST00000461018 IGFLR1Q9H665 355 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 KLK14Q9P0G3 267 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 ASAP1Q9ULH1 1129 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 ABT1Q9ULW3 272 aaKnown RBP6.26□□□□□ -1.41
CNN3-204ENST00000461018 KCNH4Q9UQ05 1017 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 SZT2Q5T011 3432 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 FAM208AQ9UK61 1670 aaKnown RBP6.26□□□□□ -1.41
CNN3-204ENST00000461018 LTN1O94822 1766 aa6.26□□□□□ -1.41
CNN3-204ENST00000461018 ITGB4P16144 1822 aa6.25□□□□□ -1.41
CNN3-204ENST00000461018 CYP27B1O15528 508 aa6.25□□□□□ -1.41
CNN3-204ENST00000461018 ALAS2P22557 587 aa6.25□□□□□ -1.41
CNN3-204ENST00000461018 NEUROD1Q13562 356 aa6.25□□□□□ -1.41
CNN3-204ENST00000461018 EAPPQ56P03 285 aaPredicted RBP6.25□□□□□ -1.41
CNN3-204ENST00000461018 BTLAQ7Z6A9 289 aa6.25□□□□□ -1.41
CNN3-204ENST00000461018 LDHDQ86WU2 507 aa6.25□□□□□ -1.41
CNN3-204ENST00000461018 STAG2Q8N3U4 1231 aa6.25□□□□□ -1.41
CNN3-204ENST00000461018 TRIM11Q96F44 468 aa6.25□□□□□ -1.41
CNN3-204ENST00000461018 DYRK3O43781 588 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 PRMT3O60678 531 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 TYRO3Q06418 890 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 HIF1AQ16665 826 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 RTN1Q16799 776 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 PRRT3Q5FWE3 981 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 NBPF6Q5VWK0 638 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 CST9Q5W186 159 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 CNTROBQ8N137 903 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 IP6K1Q92551 441 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 BHMTQ93088 406 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 NBPF4Q96M43 638 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 THSD7BQ9C0I4 1608 aa6.24□□□□□ -1.41
CNN3-204ENST00000461018 SLC17A8Q8NDX2 589 aa6.23□□□□□ -1.41
CNN3-204ENST00000461018 STK32AQ8WU08 396 aa6.23□□□□□ -1.41
CNN3-204ENST00000461018 SMARCC1Q92922 1105 aaPredicted RBP6.23□□□□□ -1.41
CNN3-204ENST00000461018 TTC21AQ8NDW8 1320 aa6.23□□□□□ -1.41
CNN3-204ENST00000461018 MYH14Q7Z406 1995 aaKnown RBP6.22□□□□□ -1.41
CNN3-204ENST00000461018 ADAMTSL1Q8N6G6 1762 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 ELOA3CA0A087WX78 387 aaPredicted RBP6.22□□□□□ -1.41
CNN3-204ENST00000461018 ELOA3DA6NLF2 546 aaPredicted RBP6.22□□□□□ -1.41
CNN3-204ENST00000461018 POLRMTO00411 1230 aaKnown RBP6.22□□□□□ -1.41
CNN3-204ENST00000461018 TRAF5O00463 557 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 WEE1P30291 646 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 TM4SF1P30408 202 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 ELOA3BQ3SY89 546 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 CIAPIN1Q6FI81 312 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 ELOA3Q8NG57 546 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 PNMA5Q96PV4 448 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 DDX21Q9NR30 783 aaKnown RBP eCLIP6.22□□□□□ -1.41
CNN3-204ENST00000461018 ATG3Q9NT62 314 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 SERPINA10Q9UK55 444 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 RTCBQ9Y3I0 505 aaKnown RBP6.22□□□□□ -1.41
CNN3-204ENST00000461018 DICER1Q9UPY3 1922 aaKnown RBP6.22□□□□□ -1.41
CNN3-204ENST00000461018 A0A0C4DFX4 3053 aa6.22□□□□□ -1.41
CNN3-204ENST00000461018 USP31Q70CQ4 1352 aa6.21□□□□□ -1.41
CNN3-204ENST00000461018 TRIOBPQ9H2D6 2365 aa6.21□□□□□ -1.42
CNN3-204ENST00000461018 TGFBR3LH3BV60 316 aa6.21□□□□□ -1.42
CNN3-204ENST00000461018 RFC4P35249 363 aa6.21□□□□□ -1.42
CNN3-204ENST00000461018 PRSS36Q5K4E3 855 aa6.21□□□□□ -1.42
CNN3-204ENST00000461018 TTLL6Q8N841 843 aa6.21□□□□□ -1.42
CNN3-204ENST00000461018 GCC1Q96CN9 775 aa6.21□□□□□ -1.42
CNN3-204ENST00000461018 MKNK1Q9BUB5 465 aa6.21□□□□□ -1.42
CNN3-204ENST00000461018 UBE2OQ9C0C9 1292 aaKnown RBP6.21□□□□□ -1.42
CNN3-204ENST00000461018 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.21□□□□□ -1.42
CNN3-204ENST00000461018 ZNF541Q9H0D2 1346 aa6.21□□□□□ -1.42
CNN3-204ENST00000461018 KTN1Q86UP2 1357 aaKnown RBP6.2□□□□□ -1.42
CNN3-204ENST00000461018 RAB3GAP2Q9H2M9 1393 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 SIN3BO75182 1162 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 RPS6KA4O75676 772 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 HOXC9P31274 260 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 EPHX2P34913 555 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 IDH3AP50213 366 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 FKBP5Q13451 457 aaPredicted RBP6.2□□□□□ -1.42
CNN3-204ENST00000461018 KRT25Q7Z3Z0 450 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 C2CD5Q86YS7 1000 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 NACC1Q96RE7 527 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 CENPJQ9HC77 1338 aaPredicted RBP6.2□□□□□ -1.42
CNN3-204ENST00000461018 ADAMTS7Q9UKP4 1686 aa6.2□□□□□ -1.42
CNN3-204ENST00000461018 CARMIL3Q8ND23 1372 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 MAP2K2P36507 400 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 ADH7P40394 386 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 ECE1P42892 770 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 C11orf91Q3C1V1 193 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms