RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 WIPI1Q5MNZ9 446 aaPredicted RBP6.38□□□□□ -1.39
ATRX-204ENST00000460639 ANKRD34AQ69YU3 496 aa6.38□□□□□ -1.39
ATRX-204ENST00000460639 GPAT2Q6NUI2 795 aa6.38□□□□□ -1.39
ATRX-204ENST00000460639 FBXL19Q6PCT2 694 aa6.38□□□□□ -1.39
ATRX-204ENST00000460639 LRFN4Q6PJG9 635 aa6.38□□□□□ -1.39
ATRX-204ENST00000460639 ZNF296Q8WUU4 475 aaPredicted RBP6.38□□□□□ -1.39
ATRX-204ENST00000460639 PLPPR2Q96GM1 343 aa6.38□□□□□ -1.39
ATRX-204ENST00000460639 OSBPL2Q9H1P3 480 aa6.38□□□□□ -1.39
ATRX-204ENST00000460639 CHPF2Q9P2E5 772 aa6.38□□□□□ -1.39
ATRX-204ENST00000460639 NOP58Q9Y2X3 529 aaKnown RBP6.38□□□□□ -1.39
ATRX-204ENST00000460639 PCDHGC5Q9Y5F6 944 aa6.38□□□□□ -1.39
ATRX-204ENST00000460639 ACTL7BQ9Y614 415 aa6.38□□□□□ -1.39
ATRX-204ENST00000460639 hCG_2014768A0A024R1R8 64 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 PRAMEF27A3QJZ7 478 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 TIAF1O95411 115 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 SLFN14P0C7P3 912 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 RAB6AP20340 208 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 HSD3B2P26439 372 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 ID3Q02535 119 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 SERINC3Q13530 473 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 DOC2BQ14184 412 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 SGO2Q562F6 1265 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 PPM1JQ5JR12 505 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 Q6ZS46 218 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 TRIM42Q8IWZ5 723 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 EXOC8Q8IYI6 725 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 C2CD4AQ8NCU7 369 aaPredicted RBP6.37□□□□□ -1.39
ATRX-204ENST00000460639 UTP4Q969X6 686 aaKnown RBP6.37□□□□□ -1.39
ATRX-204ENST00000460639 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 ELMO3Q96BJ8 720 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 SPON2Q9BUD6 331 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 CEP41Q9BYV8 373 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 CCSER2Q9H7U1 834 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 SUGCTQ9HAC7 445 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 LGR6Q9HBX8 967 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 PCDH12Q9NPG4 1184 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 IFT57Q9NWB7 429 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 CACNA2D2Q9NY47 1150 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 UBP1Q9NZI7 540 aa6.37□□□□□ -1.39
ATRX-204ENST00000460639 CCDC181Q5TID7 509 aa6.36□□□□□ -1.39
ATRX-204ENST00000460639 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
ATRX-204ENST00000460639 KIAA0825Q8IV33 1275 aa6.36□□□□□ -1.39
ATRX-204ENST00000460639 FAM46AQ96IP4 442 aaKnown RBP6.36□□□□□ -1.39
ATRX-204ENST00000460639 FANCD2OSQ96PS1 177 aa6.36□□□□□ -1.39
ATRX-204ENST00000460639 PICK1Q9NRD5 415 aa6.36□□□□□ -1.39
ATRX-204ENST00000460639 TPSG1Q9NRR2 321 aa6.36□□□□□ -1.39
ATRX-204ENST00000460639 FAM105AQ9NUU6 356 aa6.36□□□□□ -1.39
ATRX-204ENST00000460639 CRIM1Q9NZV1 1036 aa6.36□□□□□ -1.39
ATRX-204ENST00000460639 CCDC194A0A1B0GVG4 234 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 RNGTTO60942 597 aaKnown RBP6.35□□□□□ -1.39
ATRX-204ENST00000460639 PEX14O75381 377 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 CLSTN1O94985 981 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 BMP3P12645 472 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 HCLS1P14317 486 aaPredicted RBP6.35□□□□□ -1.39
ATRX-204ENST00000460639 RXRBP28702 533 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 ASPAP45381 313 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 CRKP46108 304 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 USP11P51784 963 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 TTLL4Q14679 1199 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 ZC3H12AQ5D1E8 599 aaKnown RBP6.35□□□□□ -1.39
ATRX-204ENST00000460639 DZIP1LQ8IYY4 767 aaKnown RBP6.35□□□□□ -1.39
ATRX-204ENST00000460639 ZNF654Q8IZM8 581 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 ARMC10Q8N2F6 343 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 FBLIM1Q8WUP2 373 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 SSBP4Q9BWG4 385 aaPredicted RBP6.35□□□□□ -1.39
ATRX-204ENST00000460639 IRF2BPLQ9H1B7 796 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 KCNF1Q9H3M0 494 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 MYH16Q9H6N6 1097 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 DISC1Q9NRI5 854 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 HIF3AQ9Y2N7 669 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 SUPT16HQ9Y5B9 1047 aaKnown RBP6.35□□□□□ -1.39
ATRX-204ENST00000460639 COL4A3BPQ9Y5P4 624 aa6.35□□□□□ -1.39
ATRX-204ENST00000460639 FAM221AA4D161 298 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 GRIN3BO60391 1043 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 BPNT1O95861 308 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 NEFMP07197 916 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 ARID5AQ03989 594 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 PAK2Q13177 524 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 TAF7LQ5H9L4 462 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 UBE3DQ7Z6J8 389 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 GATAD2BQ8WXI9 593 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 PMM1Q92871 262 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 EAF1Q96JC9 268 aaPredicted RBP6.34□□□□□ -1.39
ATRX-204ENST00000460639 RNPC3Q96LT9 517 aaKnown RBP6.34□□□□□ -1.39
ATRX-204ENST00000460639 SPOCK3Q9BQ16 436 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 PIDD1Q9HB75 910 aa6.34□□□□□ -1.39
ATRX-204ENST00000460639 ENPP3O14638 875 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 GREM1O60565 184 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 CILPO75339 1184 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 PROCP04070 461 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 HNRNPUQ00839 825 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATRX-204ENST00000460639 AMPD3Q01432 767 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 RPL6Q02878 288 aaKnown RBP6.33□□□□□ -1.4
ATRX-204ENST00000460639 SEZ6Q53EL9 994 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 FAM196AQ6ZSG2 479 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.33□□□□□ -1.4
ATRX-204ENST00000460639 HDXQ7Z353 690 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 MYRFLQ96LU7 910 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 ATXN3LQ9H3M9 355 aa6.33□□□□□ -1.4
ATRX-204ENST00000460639 DAGLAQ9Y4D2 1042 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms