RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 PTGS1P23219 599 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ACTN2P35609 894 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NAA16Q6N069 864 aaPredicted RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZNF790Q6PG37 636 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TSC1Q92574 1164 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CEP83Q9Y592 693 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 MARCKSP29966 332 aaPredicted RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PPP2R5DQ14738 602 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ANO6Q4KMQ2 910 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CFAP58Q5T655 872 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FASTKD5Q7L8L6 764 aaKnown RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TRMT44Q8IYL2 757 aaKnown RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SPINK5Q9NQ38 1064 aaPredicted RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RNF181Q9P0P0 153 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ADD3Q9UEY8 706 aaKnown RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 KDRP35968 1356 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ILDR1Q86SU0 546 aaPredicted RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SYCP3Q8IZU3 236 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZNF397Q8NF99 534 aaPredicted RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CHURC1Q8WUH1 139 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SIL1Q9H173 461 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SH2B1Q9NRF2 756 aaPredicted RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZBTB12Q9Y330 459 aaPredicted RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PALLDQ8WX93 1383 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CNTNAP4Q9C0A0 1308 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 H0YCG3 227 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SKILP12757 684 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FERP16591 822 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TMOD1P28289 359 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GSDMDP57764 484 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CIAPIN1Q6FI81 312 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 YAF2Q8IY57 180 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TRIML1Q8N9V2 468 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SMC1BQ8NDV3 1235 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FAM8A1Q9UBU6 413 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DPP7Q9UHL4 492 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 HACL1Q9UJ83 578 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PHLPP2Q6ZVD8 1323 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ALS2Q96Q42 1657 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NEFHP12036 1026 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 LMBR1LQ6UX01 489 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CLEC4GQ6UXB4 293 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PPM1EQ8WY54 764 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GBP3Q9H0R5 595 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 MIS18AQ9NYP9 233 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 EXOC7Q9UPT5 735 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 MINDY4BA8MYZ0 360 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DPYSL4O14531 572 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 BACH1O14867 736 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 KRT13P13646 458 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 P4HA1P13674 534 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZNF445P59923 1031 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 YWHAEP62258 255 aaKnown RBP7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ARHGAP29Q52LW3 1261 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SHTN1A0MZ66 631 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PLSCR1O15162 318 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RANBP6O60518 1105 aaKnown RBP7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TOP1P11387 765 aaKnown RBP7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GAS2L3Q86XJ1 694 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 IFT74Q96LB3 600 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TCP11L1Q9NUJ3 509 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RTL9Q8NET4 1388 aa7.05□□□□□ -1.28
HLA-DQA1-205ENST00000460633 BCL9O00512 1426 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FSD2A1L4K1 749 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GPTP24298 496 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ABCD1P33897 745 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 STX1AQ16623 288 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PLBD2Q8NHP8 589 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GSDMBQ8TAX9 411 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CRACR2AQ9BSW2 395 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SYNCQ9H7C4 482 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DDX21Q9NR30 783 aaKnown RBP eCLIP7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TRPM3Q9HCF6 1732 aaPredicted RBP7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NFAT5O94916 1531 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GOLGA6L10A6NI86 522 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZW10O43264 779 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RPS6KA4O75676 772 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NBPF7P0C2Y1 421 aaPredicted RBP7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CTAGE5O15320 804 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 EIF2B5Q13144 721 aaKnown RBP7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CUL4BQ13620 913 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FAM160B1Q5W0V3 765 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TMED8Q6PL24 325 aaPredicted RBP7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PLVAPQ9BX97 442 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZSWIM4Q9H7M6 989 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 LOC102724428A0A0B4J2F2 783 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GOLGA8CPA6NN73 597 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 F6X3S4 739 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RIMBP2O15034 1052 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 KIF5CO60282 957 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ARID4AP29374 1257 aaPredicted RBP7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SIK1P57059 783 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FAM114A1Q8IWE2 563 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RNF34Q969K3 372 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ATP10DQ9P241 1426 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 HEG1Q9ULI3 1381 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GOLIM4O00461 696 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CCDC175P0C221 793 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms