RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 UPF2Q9HAU5 1272 aaKnown RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 CTNNA3Q9UI47 895 aa9.07□□□□□ -0.96
ABCA4-202ENST00000460514 SLC4A4Q9Y6R1 1079 aa9.07□□□□□ -0.96
ABCA4-202ENST00000460514 PITPNM2Q9BZ72 1349 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 GOLGB1Q14789 3259 aaKnown RBP9.06□□□□□ -0.96
ABCA4-202ENST00000460514 SHTN1A0MZ66 631 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 ENTPD3O75355 529 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 CHGBP05060 677 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 TDO2P48775 406 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 RHBDL3P58872 404 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 SLFNL1Q499Z3 407 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 CCDC129Q6ZRS4 1044 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 FBXO22Q8NEZ5 403 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 TRPM4Q8TD43 1214 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 SH3RF3Q8TEJ3 882 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-202ENST00000460514 DCPSQ96C86 337 aaKnown RBP9.06□□□□□ -0.96
ABCA4-202ENST00000460514 IDI2Q9BXS1 227 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 NAPBQ9H115 298 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 VEZTQ9HBM0 779 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 ANO2Q9NQ90 1003 aa9.06□□□□□ -0.96
ABCA4-202ENST00000460514 ZNF70Q9UC06 446 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-202ENST00000460514 ECM29Q5VYK3 1845 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 CLRN2A0PK11 232 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 HLA-DOAP06340 250 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 HSPD1P10809 573 aaKnown RBP9.05□□□□□ -0.96
ABCA4-202ENST00000460514 MCCP23508 829 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 ALX1Q15699 326 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 NBPF9Q3BBW0 867 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 C8orf34Q49A92 452 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 EAPPQ56P03 285 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-202ENST00000460514 ZNF589Q86UQ0 364 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-202ENST00000460514 FAM83AQ86UY5 434 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 SULF1Q8IWU6 871 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 TGFBRAP1Q8WUH2 860 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 HOOK2Q96ED9 719 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 DHX36Q9H2U1 1008 aaKnown RBP9.05□□□□□ -0.96
ABCA4-202ENST00000460514 RRAGCQ9HB90 399 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 GPBP1L1Q9HC44 474 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-202ENST00000460514 ARPP21Q9UBL0 812 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-202ENST00000460514 PPP2R3BQ9Y5P8 575 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 ZMYM6O95789 1325 aa9.05□□□□□ -0.96
ABCA4-202ENST00000460514 ADAMTSL1Q8N6G6 1762 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 GSG1L2A8MUP6 293 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 TCP10L2B9ZVM9 353 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 POLR3DP05423 398 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 SLC3A2P08195 630 aaKnown RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 YY1P25490 414 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 PICALMQ13492 652 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 ANGEL2Q5VTE6 544 aaKnown RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 RNF20Q5VTR2 975 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 TTC6Q86TZ1 520 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 LDHDQ86WU2 507 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 MAPKAPK5Q8IW41 473 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 ZSCAN29Q8IWY8 852 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 IFNL3Q8IZI9 196 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 ZNF526Q8TF50 670 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 SDR42E1Q8WUS8 393 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 FAM151AQ8WW52 585 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 BBXQ8WY36 941 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 MS4A4AQ96JQ5 239 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 OSBPL5Q9H0X9 879 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 DCP1AQ9NPI6 582 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 RYDENQ9NUL5 291 aaKnown RBP9.04□□□□□ -0.96
ABCA4-202ENST00000460514 MCM9Q9NXL9 1143 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 GGA3Q9NZ52 723 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 PCDHAC2Q9Y5I4 1007 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 FLT1P17948 1338 aa9.04□□□□□ -0.96
ABCA4-202ENST00000460514 COL2A1P02458 1487 aaPredicted RBP9.03□□□□□ -0.96
ABCA4-202ENST00000460514 POTECB2RU33 542 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 PRKAB2O43741 272 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 EGFRP00533 1210 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 HIRAP54198 1017 aaPredicted RBP9.03□□□□□ -0.96
ABCA4-202ENST00000460514 TCP10Q12799 353 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 IMMTQ16891 758 aaKnown RBP9.03□□□□□ -0.96
ABCA4-202ENST00000460514 SBK1Q52WX2 424 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 MAP4K1Q92918 833 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 TRIM34Q9BYJ4 488 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 LSG1Q9H089 658 aaKnown RBP9.03□□□□□ -0.96
ABCA4-202ENST00000460514 ZNF287Q9HBT7 754 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 NMRK2Q9NPI5 230 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 PGAP2Q9UHJ9 254 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 FOCADQ5VW36 1801 aa9.03□□□□□ -0.96
ABCA4-202ENST00000460514 NAV1Q8NEY1 1877 aa9.02□□□□□ -0.96
ABCA4-202ENST00000460514 USP17L12C9JPN9 530 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 USP17L21D6R901 530 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 ZNF213O14771 459 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 HRO43593 1189 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 FGAP02671 866 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 PCP11498 1178 aaKnown RBP9.02□□□□□ -0.97
ABCA4-202ENST00000460514 ZKSCAN1P17029 563 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-202ENST00000460514 NF2P35240 595 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 NT5C2P49902 561 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 CACNB3P54284 484 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 NFIAQ12857 509 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 RASA3Q14644 834 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 SUPT20HL1Q3ZLR7 823 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 VPS53Q5VIR6 699 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 CDC37L1Q7L3B6 337 aa9.02□□□□□ -0.97
ABCA4-202ENST00000460514 KRT26Q7Z3Y9 468 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms