RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 JAG1P78504 1218 aa18.64■□□□□ 0.57
LMNA-209ENST00000459904 SPTY2D1Q68D10 685 aaPredicted RBP18.64■□□□□ 0.57
LMNA-209ENST00000459904 SPATA5Q8NB90 893 aa18.64■□□□□ 0.57
LMNA-209ENST00000459904 SH3RF3Q8TEJ3 882 aaPredicted RBP18.64■□□□□ 0.57
LMNA-209ENST00000459904 CLUAP1Q96AJ1 413 aa18.64■□□□□ 0.57
LMNA-209ENST00000459904 NSUN4Q96CB9 384 aaKnown RBP18.64■□□□□ 0.57
LMNA-209ENST00000459904 AGTPBP1Q9UPW5 1226 aa18.64■□□□□ 0.57
LMNA-209ENST00000459904 DDX60LQ5H9U9 1706 aaKnown RBP18.63■□□□□ 0.57
LMNA-209ENST00000459904 BCAR3O75815 825 aa18.63■□□□□ 0.57
LMNA-209ENST00000459904 MCAMP43121 646 aa18.63■□□□□ 0.57
LMNA-209ENST00000459904 MVPQ14764 893 aaKnown RBP18.63■□□□□ 0.57
LMNA-209ENST00000459904 GORABQ5T7V8 394 aa18.63■□□□□ 0.57
LMNA-209ENST00000459904 NKX2-3Q8TAU0 364 aa18.63■□□□□ 0.57
LMNA-209ENST00000459904 MAST2Q6P0Q8 1798 aa18.63■□□□□ 0.57
LMNA-209ENST00000459904 COL6A3P12111 3177 aa18.62■□□□□ 0.57
LMNA-209ENST00000459904 ZBTB7BO15156 539 aaPredicted RBP18.62■□□□□ 0.57
LMNA-209ENST00000459904 SLF2Q8IX21 1173 aa18.62■□□□□ 0.57
LMNA-209ENST00000459904 TEX11Q8IYF3 940 aa18.62■□□□□ 0.57
LMNA-209ENST00000459904 FRAT1Q92837 279 aaPredicted RBP18.62■□□□□ 0.57
LMNA-209ENST00000459904 OSBPL5Q9H0X9 879 aaPredicted RBP18.62■□□□□ 0.57
LMNA-209ENST00000459904 AKAP2Q9Y2D5 859 aa18.62■□□□□ 0.57
LMNA-209ENST00000459904 LAMA3Q16787 3333 aa18.62■□□□□ 0.57
LMNA-209ENST00000459904 PDS5AQ29RF7 1337 aaKnown RBP18.61■□□□□ 0.57
LMNA-209ENST00000459904 HTATIP2Q9BUP3 242 aa18.61■□□□□ 0.57
LMNA-209ENST00000459904 SOX1O00570 391 aaPredicted RBP18.6■□□□□ 0.57
LMNA-209ENST00000459904 GNAI3P08754 354 aa18.6■□□□□ 0.57
LMNA-209ENST00000459904 ADGRA1Q86SQ6 560 aa18.6■□□□□ 0.57
LMNA-209ENST00000459904 PAWRQ96IZ0 340 aaKnown RBP18.6■□□□□ 0.57
LMNA-209ENST00000459904 ASCC2Q9H1I8 757 aaPredicted RBP18.6■□□□□ 0.57
LMNA-209ENST00000459904 PRO3102Q9H379 93 aa18.6■□□□□ 0.57
LMNA-209ENST00000459904 AATFQ9NY61 560 aaKnown RBP eCLIP18.6■□□□□ 0.57
LMNA-209ENST00000459904 STAP2Q9UGK3 403 aa18.6■□□□□ 0.57
LMNA-209ENST00000459904 SLC45A1Q9Y2W3 748 aa18.6■□□□□ 0.57
LMNA-209ENST00000459904 TBC1D12O60347 775 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 TRIM27P14373 513 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 ARID4AP29374 1257 aaPredicted RBP18.59■□□□□ 0.57
LMNA-209ENST00000459904 CAP2P40123 477 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 MTX1Q13505 466 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 MAPKAPK5Q8IW41 473 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 ZNF280CQ8ND82 737 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 COA7Q96BR5 231 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 C1orf115Q9H7X2 142 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 LRP2BPQ9P2M1 347 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 SAP30BPQ9UHR5 308 aaKnown RBP18.59■□□□□ 0.57
LMNA-209ENST00000459904 DNAH12Q6ZR08 3092 aa18.59■□□□□ 0.57
LMNA-209ENST00000459904 EVI5O60447 810 aa18.58■□□□□ 0.56
LMNA-209ENST00000459904 GDF11O95390 407 aa18.58■□□□□ 0.56
LMNA-209ENST00000459904 IRF5Q13568 498 aa18.58■□□□□ 0.56
LMNA-209ENST00000459904 TGFBRAP1Q8WUH2 860 aa18.58■□□□□ 0.56
LMNA-209ENST00000459904 LRCH3Q96II8 777 aa18.58■□□□□ 0.56
LMNA-209ENST00000459904 DBNDD2Q9BQY9 259 aa18.58■□□□□ 0.56
LMNA-209ENST00000459904 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.58■□□□□ 0.56
LMNA-209ENST00000459904 DNAJC18Q9H819 358 aa18.58■□□□□ 0.56
LMNA-209ENST00000459904 PAK6Q9NQU5 681 aaPredicted RBP18.58■□□□□ 0.56
LMNA-209ENST00000459904 FRMPD3Q5JV73 1810 aa18.58■□□□□ 0.56
LMNA-209ENST00000459904 ZBTB22O15209 634 aa18.57■□□□□ 0.56
LMNA-209ENST00000459904 LDHCP07864 332 aa18.57■□□□□ 0.56
LMNA-209ENST00000459904 CT47B1P0C2W7 299 aaPredicted RBP18.57■□□□□ 0.56
LMNA-209ENST00000459904 DYNLL1P63167 89 aaKnown RBP18.57■□□□□ 0.56
LMNA-209ENST00000459904 GSTO1P78417 241 aa18.57■□□□□ 0.56
LMNA-209ENST00000459904 G3BP1Q13283 466 aaKnown RBP eCLIP18.57■□□□□ 0.568e-9■■□□□ 11.4
LMNA-209ENST00000459904 MTMR2Q13614 643 aa18.57■□□□□ 0.56
LMNA-209ENST00000459904 FAM110CQ1W6H9 321 aa18.57■□□□□ 0.56
LMNA-209ENST00000459904 PROCA1Q8NCQ7 364 aaPredicted RBP18.57■□□□□ 0.56
LMNA-209ENST00000459904 PXYLP1Q8TE99 480 aa18.57■□□□□ 0.56
LMNA-209ENST00000459904 HDAC5Q9UQL6 1122 aa18.57■□□□□ 0.56
LMNA-209ENST00000459904 USP17L5A8MUK1 530 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 GNAI2P04899 355 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 CYP2B6P20813 491 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 C7orf61Q8IZ16 206 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 TXNRD2Q9NNW7 524 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 GJD2Q9UKL4 321 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 PALD1Q9ULE6 856 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 ZMYND8Q9ULU4 1186 aaPredicted RBP18.56■□□□□ 0.56
LMNA-209ENST00000459904 NR2E3Q9Y5X4 410 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 NDUFB9Q9Y6M9 179 aa18.56■□□□□ 0.56
LMNA-209ENST00000459904 TTC39AQ5SRH9 613 aa18.55■□□□□ 0.56
LMNA-209ENST00000459904 DIEXFQ68CQ4 756 aaKnown RBP18.55■□□□□ 0.56
LMNA-209ENST00000459904 NAA16Q6N069 864 aaPredicted RBP18.55■□□□□ 0.56
LMNA-209ENST00000459904 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
LMNA-209ENST00000459904 P2RX7Q99572 595 aaKnown RBP18.55■□□□□ 0.56
LMNA-209ENST00000459904 CRISPLD2Q9H0B8 497 aa18.55■□□□□ 0.56
LMNA-209ENST00000459904 PIH1D3Q9NQM4 214 aaKnown RBP18.55■□□□□ 0.56
LMNA-209ENST00000459904 TLR7Q9NYK1 1049 aaKnown RBP18.55■□□□□ 0.56
LMNA-209ENST00000459904 PNMA3Q9UL41 463 aa18.55■□□□□ 0.56
LMNA-209ENST00000459904 COL2A1P02458 1487 aaPredicted RBP18.54■□□□□ 0.56
LMNA-209ENST00000459904 CYP2E1P05181 493 aaPredicted RBP18.54■□□□□ 0.56
LMNA-209ENST00000459904 SYN1P17600 705 aa18.54■□□□□ 0.56
LMNA-209ENST00000459904 ZAP70P43403 619 aa18.54■□□□□ 0.56
LMNA-209ENST00000459904 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
LMNA-209ENST00000459904 TRIB2Q92519 343 aa18.54■□□□□ 0.56
LMNA-209ENST00000459904 NPM3O75607 178 aaKnown RBP18.53■□□□□ 0.56
LMNA-209ENST00000459904 MNX1P50219 401 aaPredicted RBP18.53■□□□□ 0.56
LMNA-209ENST00000459904 ZYXQ15942 572 aaKnown RBP18.53■□□□□ 0.56
LMNA-209ENST00000459904 Q3C1V9 767 aa18.53■□□□□ 0.56
LMNA-209ENST00000459904 TNNI3KQ59H18 835 aa18.53■□□□□ 0.56
LMNA-209ENST00000459904 SH3D19Q5HYK7 790 aa18.53■□□□□ 0.56
LMNA-209ENST00000459904 POTEEQ6S8J3 1075 aa18.53■□□□□ 0.56
LMNA-209ENST00000459904 FPGT-TNNI3KV9GXZ4 949 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms