RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.21■■□□□ 1.79
SSNA1-202ENST00000459860 TRIM34Q9BYJ4 488 aa26.21■■□□□ 1.79
SSNA1-202ENST00000459860 HPS5Q9UPZ3 1129 aa26.21■■□□□ 1.79
SSNA1-202ENST00000459860 LAMB1P07942 1786 aa26.2■■□□□ 1.79
SSNA1-202ENST00000459860 RNF113AO15541 343 aaKnown RBP26.2■■□□□ 1.78
SSNA1-202ENST00000459860 MBD4O95243 580 aa26.2■■□□□ 1.78
SSNA1-202ENST00000459860 SREBF2Q12772 1141 aa26.2■■□□□ 1.78
SSNA1-202ENST00000459860 LCORLQ8N3X6 602 aa26.2■■□□□ 1.78
SSNA1-202ENST00000459860 WNK4Q96J92 1243 aa26.2■■□□□ 1.78
SSNA1-202ENST00000459860 PI4KBQ9UBF8 816 aa26.2■■□□□ 1.78
SSNA1-202ENST00000459860 TNRC18O15417 2968 aaPredicted RBP26.19■■□□□ 1.78
SSNA1-202ENST00000459860 DOCK1Q14185 1865 aa26.19■■□□□ 1.78
SSNA1-202ENST00000459860 ZKSCAN4Q969J2 545 aaPredicted RBP26.19■■□□□ 1.78
SSNA1-202ENST00000459860 ARMT1Q9H993 441 aa26.19■■□□□ 1.78
SSNA1-202ENST00000459860 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.19■■□□□ 1.78
SSNA1-202ENST00000459860 SAP30BPQ9UHR5 308 aaKnown RBP26.19■■□□□ 1.78
SSNA1-202ENST00000459860 ZNF112Q9UJU3 913 aa26.19■■□□□ 1.78
SSNA1-202ENST00000459860 DDX60LQ5H9U9 1706 aaKnown RBP26.19■■□□□ 1.78
SSNA1-202ENST00000459860 SIPA1L1O43166 1804 aa26.18■■□□□ 1.78
SSNA1-202ENST00000459860 TBC1D12O60347 775 aa26.18■■□□□ 1.78
SSNA1-202ENST00000459860 PKN2Q16513 984 aaKnown RBP26.18■■□□□ 1.78
SSNA1-202ENST00000459860 CRACR2BQ8N4Y2 399 aaPredicted RBP26.18■■□□□ 1.78
SSNA1-202ENST00000459860 APPBP2Q92624 585 aa26.18■■□□□ 1.78
SSNA1-202ENST00000459860 EVI5LQ96CN4 794 aa26.18■■□□□ 1.78
SSNA1-202ENST00000459860 OPTNQ96CV9 577 aa26.18■■□□□ 1.78
SSNA1-202ENST00000459860 DDRGK1Q96HY6 314 aa26.18■■□□□ 1.78
SSNA1-202ENST00000459860 HERC5Q9UII4 1024 aaKnown RBP26.18■■□□□ 1.78
SSNA1-202ENST00000459860 INPP5BP32019 993 aa26.17■■□□□ 1.78
SSNA1-202ENST00000459860 SLFNL1Q499Z3 407 aa26.17■■□□□ 1.78
SSNA1-202ENST00000459860 PLEKHM2Q8IWE5 1019 aa26.17■■□□□ 1.78
SSNA1-202ENST00000459860 OSBPL3Q9H4L5 887 aa26.17■■□□□ 1.78
SSNA1-202ENST00000459860 PALD1Q9ULE6 856 aa26.17■■□□□ 1.78
SSNA1-202ENST00000459860 SNCAIPQ9Y6H5 919 aa26.17■■□□□ 1.78
SSNA1-202ENST00000459860 ATAD5Q96QE3 1844 aa26.16■■□□□ 1.78
SSNA1-202ENST00000459860 MANSC4A6NHS7 340 aaPredicted RBP26.16■■□□□ 1.78
SSNA1-202ENST00000459860 TRIM6-TRIM34B2RNG4 842 aa26.16■■□□□ 1.78
SSNA1-202ENST00000459860 MAP3K10Q02779 954 aa26.16■■□□□ 1.78
SSNA1-202ENST00000459860 TTC6Q86TZ1 520 aa26.16■■□□□ 1.78
SSNA1-202ENST00000459860 ERO1BQ86YB8 467 aa26.16■■□□□ 1.78
SSNA1-202ENST00000459860 OTUD5Q96G74 571 aa26.16■■□□□ 1.78
SSNA1-202ENST00000459860 SPDYE5A6NIY4 337 aa26.15■■□□□ 1.78
SSNA1-202ENST00000459860 CHGBP05060 677 aa26.15■■□□□ 1.78
SSNA1-202ENST00000459860 NOL9Q5SY16 702 aaKnown RBP26.15■■□□□ 1.78
SSNA1-202ENST00000459860 PUS7LQ9H0K6 701 aaKnown RBP26.15■■□□□ 1.78
SSNA1-202ENST00000459860 PICK1Q9NRD5 415 aa26.15■■□□□ 1.78
SSNA1-202ENST00000459860 POLR3DP05423 398 aaPredicted RBP26.14■■□□□ 1.78
SSNA1-202ENST00000459860 FOXP4Q8IVH2 680 aaPredicted RBP26.14■■□□□ 1.78
SSNA1-202ENST00000459860 AMOTL1Q8IY63 956 aa26.14■■□□□ 1.78
SSNA1-202ENST00000459860 SDR42E1Q8WUS8 393 aa26.14■■□□□ 1.78
SSNA1-202ENST00000459860 ATP8A2Q9NTI2 1148 aa26.14■■□□□ 1.78
SSNA1-202ENST00000459860 BAZ2AQ9UIF9 1905 aaKnown RBP26.14■■□□□ 1.77
SSNA1-202ENST00000459860 FAM196BA6NMK8 535 aa26.13■■□□□ 1.77
SSNA1-202ENST00000459860 PHF20L1A8MW92 1017 aa26.13■■□□□ 1.77
SSNA1-202ENST00000459860 CTNND1O60716 968 aaKnown RBP26.13■■□□□ 1.77
SSNA1-202ENST00000459860 INHBEP58166 350 aa26.13■■□□□ 1.77
SSNA1-202ENST00000459860 SLC4A8Q2Y0W8 1093 aa26.13■■□□□ 1.77
SSNA1-202ENST00000459860 SCYL3Q8IZE3 742 aa26.13■■□□□ 1.77
SSNA1-202ENST00000459860 MCM9Q9NXL9 1143 aa26.13■■□□□ 1.77
SSNA1-202ENST00000459860 SLC4A4Q9Y6R1 1079 aa26.13■■□□□ 1.77
SSNA1-202ENST00000459860 FKTNO75072 461 aa26.12■■□□□ 1.77
SSNA1-202ENST00000459860 PPATQ06203 517 aa26.12■■□□□ 1.77
SSNA1-202ENST00000459860 CENPQQ7L2Z9 268 aaPredicted RBP26.12■■□□□ 1.77
SSNA1-202ENST00000459860 IFNL1Q8IU54 200 aa26.12■■□□□ 1.77
SSNA1-202ENST00000459860 RILPL2Q969X0 211 aa26.12■■□□□ 1.77
SSNA1-202ENST00000459860 DCP1AQ9NPI6 582 aaPredicted RBP26.12■■□□□ 1.77
SSNA1-202ENST00000459860 ALDH1A1P00352 501 aa26.11■■□□□ 1.77
SSNA1-202ENST00000459860 GJA5P36382 358 aa26.11■■□□□ 1.77
SSNA1-202ENST00000459860 PPIL2Q13356 520 aa26.11■■□□□ 1.77
SSNA1-202ENST00000459860 FBXO46Q6PJ61 603 aaPredicted RBP26.11■■□□□ 1.77
SSNA1-202ENST00000459860 TICAM2Q86XR7 235 aa26.11■■□□□ 1.77
SSNA1-202ENST00000459860 CNKSR2Q8WXI2 1034 aa26.11■■□□□ 1.77
SSNA1-202ENST00000459860 OSBP2Q969R2 916 aa26.11■■□□□ 1.77
SSNA1-202ENST00000459860 EHD4Q9H223 541 aa26.11■■□□□ 1.77
SSNA1-202ENST00000459860 MYH8P13535 1937 aa26.1■■□□□ 1.77
SSNA1-202ENST00000459860 IGF2BP3O00425 579 aaKnown RBP eCLIP26.1■■□□□ 1.77
SSNA1-202ENST00000459860 PRKAB2O43741 272 aa26.1■■□□□ 1.77
SSNA1-202ENST00000459860 SLURP2P0DP57 97 aa26.1■■□□□ 1.77
SSNA1-202ENST00000459860 GNAT2P19087 354 aa26.1■■□□□ 1.77
SSNA1-202ENST00000459860 GTF2A2P52657 109 aa26.1■■□□□ 1.77
SSNA1-202ENST00000459860 SERPINB13Q9UIV8 391 aa26.1■■□□□ 1.77
SSNA1-202ENST00000459860 GPAA1O43292 621 aa26.09■■□□□ 1.77
SSNA1-202ENST00000459860 ZMYM1Q5SVZ6 1142 aa26.09■■□□□ 1.77
SSNA1-202ENST00000459860 METTL16Q86W50 562 aaKnown RBP26.09■■□□□ 1.77
SSNA1-202ENST00000459860 STRBPQ96SI9 672 aaKnown RBP26.09■■□□□ 1.77
SSNA1-202ENST00000459860 M0R2C6 588 aa26.08■■□□□ 1.77
SSNA1-202ENST00000459860 PDE4AP27815 886 aa26.08■■□□□ 1.77
SSNA1-202ENST00000459860 OTUD7BQ6GQQ9 843 aa26.08■■□□□ 1.77
SSNA1-202ENST00000459860 CCDC136Q96JN2 1154 aa26.08■■□□□ 1.77
SSNA1-202ENST00000459860 CAP2P40123 477 aa26.07■■□□□ 1.76
SSNA1-202ENST00000459860 SNAPC2Q13487 334 aa26.07■■□□□ 1.76
SSNA1-202ENST00000459860 IRF6O14896 467 aa26.06■■□□□ 1.76
SSNA1-202ENST00000459860 DNAJC18Q9H819 358 aa26.06■■□□□ 1.76
SSNA1-202ENST00000459860 ARPP21Q9UBL0 812 aaPredicted RBP26.06■■□□□ 1.76
SSNA1-202ENST00000459860 PHIPQ8WWQ0 1821 aa26.06■■□□□ 1.76
SSNA1-202ENST00000459860 CCL15-CCL14A0A0B4J2E2 113 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 APPP05067 770 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 CETPP11597 493 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 PTPRAP18433 802 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 PLCD1P51178 756 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 CCL15Q16663 113 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms