RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 FRAT2O75474 233 aaPredicted RBP11.39□□□□□ -0.59
SCNM1-203ENST00000459799 XRCC5P13010 732 aaKnown RBP11.39□□□□□ -0.59
SCNM1-203ENST00000459799 CYP2B6P20813 491 aa11.39□□□□□ -0.59
SCNM1-203ENST00000459799 GCLCP48506 637 aaPredicted RBP11.39□□□□□ -0.59
SCNM1-203ENST00000459799 CALD1Q05682 793 aaKnown RBP11.39□□□□□ -0.59
SCNM1-203ENST00000459799 FKBP5Q13451 457 aaPredicted RBP11.39□□□□□ -0.59
SCNM1-203ENST00000459799 DIXDC1Q155Q3 683 aa11.39□□□□□ -0.59
SCNM1-203ENST00000459799 VGLL2Q8N8G2 317 aa11.39□□□□□ -0.59
SCNM1-203ENST00000459799 PROCA1Q8NCQ7 364 aaPredicted RBP11.39□□□□□ -0.59
SCNM1-203ENST00000459799 ADAMTS8Q9UP79 889 aa11.39□□□□□ -0.59
SCNM1-203ENST00000459799 MROH5Q6ZUA9 1318 aa11.38□□□□□ -0.59
SCNM1-203ENST00000459799 ZKSCAN1P17029 563 aaPredicted RBP11.38□□□□□ -0.59
SCNM1-203ENST00000459799 MAP3K10Q02779 954 aa11.38□□□□□ -0.59
SCNM1-203ENST00000459799 WDR43Q15061 677 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCNM1-203ENST00000459799 CAVIN4Q5BKX8 364 aa11.38□□□□□ -0.59
SCNM1-203ENST00000459799 SH3BP5LQ7L8J4 393 aa11.38□□□□□ -0.59
SCNM1-203ENST00000459799 ADAMTS19Q8TE59 1207 aa11.38□□□□□ -0.59
SCNM1-203ENST00000459799 SOCS4Q8WXH5 440 aa11.38□□□□□ -0.59
SCNM1-203ENST00000459799 TSR2Q969E8 191 aaKnown RBP11.38□□□□□ -0.59
SCNM1-203ENST00000459799 SENP6Q9GZR1 1112 aaPredicted RBP11.38□□□□□ -0.59
SCNM1-203ENST00000459799 MORF4L1Q9UBU8 362 aa11.38□□□□□ -0.59
SCNM1-203ENST00000459799 TRANK1O15050 2925 aa11.38□□□□□ -0.59
SCNM1-203ENST00000459799 CTNND1O60716 968 aaKnown RBP11.37□□□□□ -0.59
SCNM1-203ENST00000459799 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
SCNM1-203ENST00000459799 RTP1P59025 263 aa11.37□□□□□ -0.59
SCNM1-203ENST00000459799 GRIN2CQ14957 1233 aa11.37□□□□□ -0.59
SCNM1-203ENST00000459799 RALBP1Q15311 655 aa11.37□□□□□ -0.59
SCNM1-203ENST00000459799 CCL14Q16627 93 aa11.37□□□□□ -0.59
SCNM1-203ENST00000459799 BEND3Q5T5X7 828 aa11.37□□□□□ -0.59
SCNM1-203ENST00000459799 USP6NLQ92738 828 aa11.37□□□□□ -0.59
SCNM1-203ENST00000459799 ASCC2Q9H1I8 757 aaPredicted RBP11.37□□□□□ -0.59
SCNM1-203ENST00000459799 PRKAG2Q9UGJ0 569 aa11.37□□□□□ -0.59
SCNM1-203ENST00000459799 KIF16BQ96L93 1317 aa11.36□□□□□ -0.59
SCNM1-203ENST00000459799 GRM8O00222 908 aa11.36□□□□□ -0.59
SCNM1-203ENST00000459799 PEX10O60683 326 aa11.36□□□□□ -0.59
SCNM1-203ENST00000459799 PRDX5P30044 214 aa11.36□□□□□ -0.59
SCNM1-203ENST00000459799 RGS3P49796 1198 aa11.36□□□□□ -0.59
SCNM1-203ENST00000459799 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
SCNM1-203ENST00000459799 TRMT44Q8IYL2 757 aaKnown RBP11.36□□□□□ -0.59
SCNM1-203ENST00000459799 SPDYE1Q8NFV5 336 aaPredicted RBP11.36□□□□□ -0.59
SCNM1-203ENST00000459799 ATXN2LQ8WWM7 1075 aaKnown RBP11.36□□□□□ -0.59
SCNM1-203ENST00000459799 ASB2Q96Q27 587 aa11.36□□□□□ -0.59
SCNM1-203ENST00000459799 NUDT12Q9BQG2 462 aa11.36□□□□□ -0.59
SCNM1-203ENST00000459799 USP40Q9NVE5 1235 aa11.36□□□□□ -0.59
SCNM1-203ENST00000459799 LRRFIP2Q9Y608 721 aaKnown RBP11.36□□□□□ -0.59
SCNM1-203ENST00000459799 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
SCNM1-203ENST00000459799 SIPA1L1O43166 1804 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 DDTLA6NHG4 134 aaPredicted RBP11.35□□□□□ -0.59
SCNM1-203ENST00000459799 APAF1O14727 1248 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 HMGCS2P54868 508 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 LRRC24Q50LG9 513 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 BADQ92934 168 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 KAZALD1Q96I82 304 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 UHRF1Q96T88 793 aaPredicted RBP11.35□□□□□ -0.59
SCNM1-203ENST00000459799 APBA2Q99767 749 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 IDI2Q9BXS1 227 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 TXNRD2Q9NNW7 524 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 THEGQ9P2T0 379 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 MUC6Q6W4X9 2439 aa11.35□□□□□ -0.59
SCNM1-203ENST00000459799 F6X3S4 739 aa11.34□□□□□ -0.59
SCNM1-203ENST00000459799 ENTPD3O75355 529 aa11.34□□□□□ -0.59
SCNM1-203ENST00000459799 PDE8BO95263 885 aa11.34□□□□□ -0.59
SCNM1-203ENST00000459799 SPP2Q13103 211 aa11.34□□□□□ -0.59
SCNM1-203ENST00000459799 MORN1Q5T089 497 aa11.34□□□□□ -0.59
SCNM1-203ENST00000459799 WDR66Q8TBY9 1149 aa11.34□□□□□ -0.59
SCNM1-203ENST00000459799 DDX4Q9NQI0 724 aaKnown RBP11.34□□□□□ -0.59
SCNM1-203ENST00000459799 PDLIM7Q9NR12 457 aa11.34□□□□□ -0.59
SCNM1-203ENST00000459799 ATP11BQ9Y2G3 1177 aa11.34□□□□□ -0.59
SCNM1-203ENST00000459799 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
SCNM1-203ENST00000459799 TCF20Q9UGU0 1960 aaKnown RBP11.34□□□□□ -0.59
SCNM1-203ENST00000459799 FAM196BA6NMK8 535 aa11.33□□□□□ -0.6
SCNM1-203ENST00000459799 DNM1LO00429 736 aa11.33□□□□□ -0.6
SCNM1-203ENST00000459799 FGFR2P21802 821 aa11.33□□□□□ -0.6
SCNM1-203ENST00000459799 DNAJB2P25686 324 aa11.33□□□□□ -0.6
SCNM1-203ENST00000459799 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.66e-7■■■■□ 21.2
SCNM1-203ENST00000459799 SNX17Q15036 470 aa11.33□□□□□ -0.6
SCNM1-203ENST00000459799 METTL24Q5JXM2 366 aa11.33□□□□□ -0.6
SCNM1-203ENST00000459799 ZNF280CQ8ND82 737 aa11.33□□□□□ -0.6
SCNM1-203ENST00000459799 PORCNQ9H237 461 aa11.33□□□□□ -0.6
SCNM1-203ENST00000459799 PRDM5Q9NQX1 630 aaPredicted RBP11.33□□□□□ -0.6
SCNM1-203ENST00000459799 DDX20Q9UHI6 824 aaKnown RBP11.33□□□□□ -0.6
SCNM1-203ENST00000459799 PLXNA1Q9UIW2 1896 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 TRIM43BA6NCK2 446 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 MAPK4P31152 587 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 RGS2P41220 211 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 EPHB4P54760 987 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 PDE3AQ14432 1141 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 SH3D19Q5HYK7 790 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 GPR142Q7Z601 462 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 ZSCAN29Q8IWY8 852 aaPredicted RBP11.32□□□□□ -0.6
SCNM1-203ENST00000459799 LPAR1Q92633 364 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 TRIM43Q96BQ3 446 aaPredicted RBP11.32□□□□□ -0.6
SCNM1-203ENST00000459799 SUCLG2Q96I99 432 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 RNPC3Q96LT9 517 aaKnown RBP11.32□□□□□ -0.6
SCNM1-203ENST00000459799 C1QTNF1Q9BXJ1 281 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 FLRT1Q9NZU1 646 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 ZNF236Q9UL36 1845 aa11.32□□□□□ -0.6
SCNM1-203ENST00000459799 GAKO14976 1311 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms