RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 SPTLC3Q9NUV7 552 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 BUB1BO60566 1050 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 VIMP08670 466 aaKnown RBP12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 MXRA7P84157 204 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 APBA1Q02410 837 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 METTL22Q9BUU2 404 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 TPCN1Q9ULQ1 816 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 RNMTO43148 476 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 ZNF174Q15697 407 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 USP28Q96RU2 1077 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 SYNCQ9H7C4 482 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 UTP11Q9Y3A2 253 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 VGLL3A8MV65 326 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 ATP6V1AP38606 617 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 SEL1L2Q5TEA6 688 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 CCDC84Q86UT8 332 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 RRP36Q96EU6 259 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 SLF1Q9BQI6 1058 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 DBNDD2Q9BQY9 259 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 PLCB1Q9NQ66 1216 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 RXRAP19793 462 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 MAGEA1P43355 309 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 SLC9C1Q4G0N8 1177 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 PDLIM2Q96JY6 352 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 HAUS4Q9H6D7 363 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 KCNK9Q9NPC2 374 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 GBP1P32455 592 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 TNRQ92752 1358 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 TRIM58Q8NG06 486 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 EXOC4Q96A65 974 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 MYO1AQ9UBC5 1043 aa12.75□□□□□ -0.37
TRAPPC10-204ENST00000459741 IKBKBO14920 756 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 PDE4DQ08499 809 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 SLC39A6Q13433 755 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 TAOK1Q7L7X3 1001 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 HS2ST1Q7LGA3 356 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 CCDC65Q8IXS2 484 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 ARHGEF10O15013 1369 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 PPP1R7Q15435 360 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 OTUD7BQ6GQQ9 843 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 SRGAP1Q7Z6B7 1085 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 OR8K1Q8NGG5 319 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 TAB2Q9NYJ8 693 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 TTC38Q5R3I4 469 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 CACNA2D3Q8IZS8 1091 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 CDC23Q9UJX2 597 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 HOXC9P31274 260 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 ADKP55263 362 aaKnown RBP12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 GNGT1P63211 74 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 MAGEB6Q8N7X4 407 aa12.74□□□□□ -0.37
TRAPPC10-204ENST00000459741 B4E1Z4 1266 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 SARNPP82979 210 aaKnown RBP12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 TSNAXIP1Q2TAA8 658 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 OGFOD1Q8N543 542 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 SMIM23A6NLE4 172 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 E7EWF7 191 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 RAPGEF1Q13905 1077 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 EFCAB13Q8IY85 973 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 CACTINQ8WUQ7 758 aaKnown RBP12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 SEC62Q99442 399 aaKnown RBP12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 CAPS2Q9BXY5 557 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 PTH1RQ03431 593 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 RRP15Q9Y3B9 282 aaKnown RBP12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 PNOCQ13519 176 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 STMN2Q93045 179 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 EFCC1Q9HA90 598 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 CCDC151A5D8V7 595 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 F8W031 263 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 SLFNL1Q499Z3 407 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 DAAM2Q86T65 1068 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 NELFBQ8WX92 580 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 RTEL1Q9NZ71 1219 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 ATP6V0A2Q9Y487 856 aa12.73□□□□□ -0.37
TRAPPC10-204ENST00000459741 TRAF5O00463 557 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 ATP2A2P16615 1042 aaKnown RBP12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 ASIC2Q16515 512 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 GSTA5Q7RTV2 222 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 CAPN7Q9Y6W3 813 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 SLC8A1P32418 973 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 PCK1P35558 622 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 PLBD2Q8NHP8 589 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 ZBTB9Q96C00 473 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 GPAA1O43292 621 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 SYCE1Q8N0S2 351 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 MBD4O95243 580 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 ARL1P40616 181 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 IP6K1Q92551 441 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 USP44Q9H0E7 712 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 HYOU1Q9Y4L1 999 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 E7EVH7 732 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 TCP1P17987 556 aaKnown RBP12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
TRAPPC10-204ENST00000459741 SUCLG2Q96I99 432 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms