RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 FKBP1CQ5VVH2 108 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 RNF19BQ6ZMZ0 732 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 TRIM67Q6ZTA4 783 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 HELBQ8NG08 1087 aaPredicted RBP7.17□□□□□ -1.26
VPS8-214ENST00000458721 CD99L2Q8TCZ2 262 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 TBC1D22AQ8WUA7 517 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 JARID2Q92833 1246 aaPredicted RBP7.17□□□□□ -1.26
VPS8-214ENST00000458721 OPTNQ96CV9 577 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 ZFYVE28Q9HCC9 887 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 SUGT1Q9Y2Z0 365 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 FCF1Q9Y324 198 aaKnown RBP7.17□□□□□ -1.26
VPS8-214ENST00000458721 CSADQ9Y600 493 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 MAST3O60307 1309 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 KIF16BQ96L93 1317 aa7.17□□□□□ -1.26
VPS8-214ENST00000458721 TRIOBPQ9H2D6 2365 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 DOCK2Q92608 1830 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 CCL15-CCL14A0A0B4J2E2 113 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 CLRN2A0PK11 232 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 SPDYE5A6NIY4 337 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 USP2O75604 605 aaPredicted RBP7.16□□□□□ -1.26
VPS8-214ENST00000458721 GJA5P36382 358 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 RPIAP49247 311 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 FXR1P51114 621 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS8-214ENST00000458721 PRR20EP86478 221 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 PRR20CP86479 221 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 PRR20DP86480 221 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 PRR20BP86481 221 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 PRR20AP86496 221 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 DDX10Q13206 875 aaKnown RBP7.16□□□□□ -1.26
VPS8-214ENST00000458721 KIF22Q14807 665 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 TAF1CQ15572 869 aaPredicted RBP7.16□□□□□ -1.26
VPS8-214ENST00000458721 CCL15Q16663 113 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 CCDC57Q2TAC2 916 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 NBPF12Q5TAG4 269 aaPredicted RBP7.16□□□□□ -1.26
VPS8-214ENST00000458721 LDHAL6AQ6ZMR3 332 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 FAM83AQ86UY5 434 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 WWC1Q8IX03 1113 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS8-214ENST00000458721 TDRD7Q8NHU6 1098 aaKnown RBP7.16□□□□□ -1.26
VPS8-214ENST00000458721 TSR2Q969E8 191 aaKnown RBP7.16□□□□□ -1.26
VPS8-214ENST00000458721 PRMT6Q96LA8 375 aaPredicted RBP7.16□□□□□ -1.26
VPS8-214ENST00000458721 TEPSINQ96N21 525 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 PTPN18Q99952 460 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 PRDM9Q9NQV7 894 aa7.16□□□□□ -1.26
VPS8-214ENST00000458721 MGAMO43451 1857 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 GRM8O00222 908 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 LCE2BO14633 110 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 HOXA2O43364 376 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 TLR2O60603 784 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 ALDH1L1O75891 902 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 CETPP11597 493 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 RBM5P52756 815 aaKnown RBP eCLIP7.15□□□□□ -1.26
VPS8-214ENST00000458721 FOXO4P98177 505 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 VGLL4Q14135 290 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 TAF7LQ5H9L4 462 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 DCAF15Q66K64 600 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.15□□□□□ -1.26
VPS8-214ENST00000458721 G2E3Q7L622 706 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 ERO1BQ86YB8 467 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 DZIP1LQ8IYY4 767 aaKnown RBP7.15□□□□□ -1.26
VPS8-214ENST00000458721 BRI3BPQ8WY22 251 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 MRIQ9BWK5 157 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 CNNM1Q9NRU3 951 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 TMOD2Q9NZR1 351 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 ZNF70Q9UC06 446 aaPredicted RBP7.15□□□□□ -1.26
VPS8-214ENST00000458721 TTF2Q9UNY4 1162 aaKnown RBP7.15□□□□□ -1.26
VPS8-214ENST00000458721 MROH5Q6ZUA9 1318 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 FANCIQ9NVI1 1328 aa7.15□□□□□ -1.26
VPS8-214ENST00000458721 ZSWIM8A7E2V4 1837 aa7.15□□□□□ -1.27
VPS8-214ENST00000458721 A0A1W2PPC1 479 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 F8W031 263 aaPredicted RBP7.14□□□□□ -1.27
VPS8-214ENST00000458721 TAF5LO75529 589 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 PTPRFP10586 1907 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 HIBADHP31937 336 aaKnown RBP7.14□□□□□ -1.27
VPS8-214ENST00000458721 LACTBP83111 547 aaPredicted RBP7.14□□□□□ -1.27
VPS8-214ENST00000458721 PPIL2Q13356 520 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 SNAPC2Q13487 334 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 BEND3Q5T5X7 828 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 LMBR1LQ6UX01 489 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 WDR63Q8IWG1 891 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 TEKT1Q969V4 418 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 ELP3Q9H9T3 547 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 FZD1Q9UP38 647 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 CHMP3Q9Y3E7 222 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 PTCH2Q9Y6C5 1203 aa7.14□□□□□ -1.27
VPS8-214ENST00000458721 RANBP2P49792 3224 aaKnown RBP7.14□□□□□ -1.27
VPS8-214ENST00000458721 DOCK1Q14185 1865 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 UTYO14607 1347 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 GDF9O60383 454 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 CD2BP2O95400 341 aaKnown RBP7.13□□□□□ -1.27
VPS8-214ENST00000458721 EN2P19622 333 aaPredicted RBP7.13□□□□□ -1.27
VPS8-214ENST00000458721 CRKP46108 304 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 PPATQ06203 517 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 SLC4A8Q2Y0W8 1093 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 PKDCCQ504Y2 493 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 CAVIN4Q5BKX8 364 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 FAM43AQ8N2R8 423 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 ZDHHC15Q96MV8 337 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 USB1Q9BQ65 265 aaKnown RBP7.13□□□□□ -1.27
VPS8-214ENST00000458721 TMEM39BQ9GZU3 492 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms