RNA–Protein interactions for RNA: ENST00000458604.6

PSMC6-202, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-202ENST00000458604 NCAPHQ15003 741 aa11.13□□□□□ -0.63
PSMC6-202ENST00000458604 INTS3Q68E01 1043 aaKnown RBP11.13□□□□□ -0.63
PSMC6-202ENST00000458604 LRFN4Q6PJG9 635 aa11.13□□□□□ -0.63
PSMC6-202ENST00000458604 FAM35AQ86V20 835 aa11.13□□□□□ -0.63
PSMC6-202ENST00000458604 NIM1KQ8IY84 436 aa11.13□□□□□ -0.63
PSMC6-202ENST00000458604 CCDC155Q8N6L0 562 aa11.13□□□□□ -0.63
PSMC6-202ENST00000458604 GPBAR1Q8TDU6 330 aa11.13□□□□□ -0.63
PSMC6-202ENST00000458604 ATG4CQ96DT6 458 aa11.13□□□□□ -0.63
PSMC6-202ENST00000458604 GMIPQ9P107 970 aa11.13□□□□□ -0.63
PSMC6-202ENST00000458604 RIPOR2Q9Y4F9 1068 aa11.13□□□□□ -0.63
PSMC6-202ENST00000458604 SLC22A31A6NKX4 558 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 SUSD5O60279 629 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 SIN3BO75182 1162 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 EPHA1P21709 976 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 WIPI1Q5MNZ9 446 aaPredicted RBP11.12□□□□□ -0.63
PSMC6-202ENST00000458604 KLHL6Q8WZ60 621 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 PLPPR2Q96GM1 343 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 LPIN3Q9BQK8 851 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 SMG9Q9H0W8 520 aaKnown RBP11.12□□□□□ -0.63
PSMC6-202ENST00000458604 REV1Q9UBZ9 1251 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 PCDHB10Q9UN67 800 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 PCDHA4Q9UN74 947 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 PDZRN3Q9UPQ7 1066 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
PSMC6-202ENST00000458604 IRS4O14654 1257 aaPredicted RBP11.11□□□□□ -0.63
PSMC6-202ENST00000458604 TNFRSF10CO14798 259 aa11.11□□□□□ -0.63
PSMC6-202ENST00000458604 MYCLP1P12525 358 aaPredicted RBP11.11□□□□□ -0.63
PSMC6-202ENST00000458604 PABPC4Q13310 644 aaKnown RBP eCLIP11.11□□□□□ -0.63
PSMC6-202ENST00000458604 BRDTQ58F21 947 aaPredicted RBP11.11□□□□□ -0.63
PSMC6-202ENST00000458604 ZNF468Q5VIY5 522 aaPredicted RBP11.11□□□□□ -0.63
PSMC6-202ENST00000458604 FOXB2Q5VYV0 432 aa11.11□□□□□ -0.63
PSMC6-202ENST00000458604 CHAC2Q8WUX2 184 aa11.11□□□□□ -0.63
PSMC6-202ENST00000458604 SLC26A8Q96RN1 970 aa11.11□□□□□ -0.63
PSMC6-202ENST00000458604 SLC9A7Q96T83 725 aa11.11□□□□□ -0.63
PSMC6-202ENST00000458604 CNNM2Q9H8M5 875 aa11.11□□□□□ -0.63
PSMC6-202ENST00000458604 SLC6A14Q9UN76 642 aa11.11□□□□□ -0.63
PSMC6-202ENST00000458604 CUX2O14529 1486 aa11.11□□□□□ -0.63
PSMC6-202ENST00000458604 C2CD2LO14523 706 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 RFPL3O75679 317 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 CNGA1P29973 690 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 EXOSC10Q01780 885 aaKnown RBP11.1□□□□□ -0.63
PSMC6-202ENST00000458604 ZNF787Q6DD87 383 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 DDX42Q86XP3 938 aaKnown RBP eCLIP11.1□□□□□ -0.63
PSMC6-202ENST00000458604 RAVER1Q8IY67 606 aaKnown RBP11.1□□□□□ -0.63
PSMC6-202ENST00000458604 MICALL1Q8N3F8 863 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 TNFRSF25Q93038 417 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 SGSM3Q96HU1 749 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 ZC3H12CQ9C0D7 883 aaKnown RBP11.1□□□□□ -0.63
PSMC6-202ENST00000458604 PHAXQ9H814 394 aaKnown RBP11.1□□□□□ -0.63
PSMC6-202ENST00000458604 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 PRR12Q9ULL5 1215 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 SNCAIPQ9Y6H5 919 aa11.1□□□□□ -0.63
PSMC6-202ENST00000458604 RAD54L2Q9Y4B4 1467 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 PLEKHD1A6NEE1 506 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 ECEL1O95672 775 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 ZC3H12BQ5HYM0 836 aaKnown RBP11.09□□□□□ -0.63
PSMC6-202ENST00000458604 CDCP2Q5VXM1 449 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 KIAA1211LQ6NV74 962 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 NLRC3Q7RTR2 1065 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 RNF180Q86T96 592 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
PSMC6-202ENST00000458604 KISS1RQ969F8 398 aaPredicted RBP11.09□□□□□ -0.63
PSMC6-202ENST00000458604 NRSN2Q9GZP1 204 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 EPN3Q9H201 632 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 PHF24Q9UPV7 400 aa11.09□□□□□ -0.63
PSMC6-202ENST00000458604 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
PSMC6-202ENST00000458604 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
PSMC6-202ENST00000458604 LRRC47Q8N1G4 583 aaKnown RBP11.08□□□□□ -0.64
PSMC6-202ENST00000458604 EXOC2Q96KP1 924 aa11.08□□□□□ -0.64
PSMC6-202ENST00000458604 SOX17Q9H6I2 414 aaPredicted RBP11.08□□□□□ -0.64
PSMC6-202ENST00000458604 CAAP1Q9H8G2 361 aa11.08□□□□□ -0.64
PSMC6-202ENST00000458604 ABCA10Q8WWZ4 1543 aa11.08□□□□□ -0.64
PSMC6-202ENST00000458604 EEA1Q15075 1411 aa11.08□□□□□ -0.64
PSMC6-202ENST00000458604 KIF27Q86VH2 1401 aa11.08□□□□□ -0.64
PSMC6-202ENST00000458604 ITGA6P23229 1130 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 CDC27P30260 824 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 PCBP4P57723 403 aaKnown RBP11.07□□□□□ -0.64
PSMC6-202ENST00000458604 TMEM201Q5SNT2 666 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 ELMSAN1Q6PJG2 1045 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 CRIPAKQ8N1N5 446 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 CEP89Q96ST8 783 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 MDFIQ99750 246 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 CCDC86Q9H6F5 360 aaKnown RBP11.07□□□□□ -0.64
PSMC6-202ENST00000458604 FRRS1LQ9P0K9 344 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 KLF15Q9UIH9 416 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 EID1Q9Y6B2 187 aa11.07□□□□□ -0.64
PSMC6-202ENST00000458604 CCDC163A0A0D9SF12 145 aa11.06□□□□□ -0.64
PSMC6-202ENST00000458604 H3BRJ5 948 aa11.06□□□□□ -0.64
PSMC6-202ENST00000458604 AXIN1O15169 862 aa11.06□□□□□ -0.64
PSMC6-202ENST00000458604 TPD52L2O43399 206 aaKnown RBP11.06□□□□□ -0.64
PSMC6-202ENST00000458604 PDE8AO60658 829 aa11.06□□□□□ -0.64
PSMC6-202ENST00000458604 PLCG1P19174 1290 aa11.06□□□□□ -0.64
PSMC6-202ENST00000458604 L1CAMP32004 1257 aa11.06□□□□□ -0.64
PSMC6-202ENST00000458604 ACSBG1Q96GR2 724 aa11.06□□□□□ -0.64
PSMC6-202ENST00000458604 NCOA5Q9HCD5 579 aaKnown RBP11.06□□□□□ -0.64
PSMC6-202ENST00000458604 KRT82Q9NSB4 513 aa11.06□□□□□ -0.64
PSMC6-202ENST00000458604 TACC3Q9Y6A5 838 aa11.06□□□□□ -0.64
PSMC6-202ENST00000458604 FAM86C2PA6NEL3 165 aa11.05□□□□□ -0.64
PSMC6-202ENST00000458604 GSG1L2A8MUP6 293 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms