RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 JDP2Q8WYK2 163 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 STRN3Q13033 797 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 PAK1Q13153 545 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 NELFBQ8WX92 580 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 RPRD2Q5VT52 1461 aaKnown RBP21.92■■□□□ 1.1
SNX27-204ENST00000458013 GMNNO75496 209 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 MAN1A1P33908 653 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 PCK1P35558 622 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 TSC1Q92574 1164 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 RPL13P26373 211 aaKnown RBP21.92■■□□□ 1.1
SNX27-204ENST00000458013 ADKP55263 362 aaKnown RBP21.92■■□□□ 1.1
SNX27-204ENST00000458013 CAPN12Q6ZSI9 719 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 ANO3Q9BYT9 981 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 TYW1BQ6NUM6 668 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 CCDC170Q8IYT3 715 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 ASIC3Q9UHC3 531 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 SECISBP2LQ93073 1101 aaKnown RBP21.91■■□□□ 1.1
SNX27-204ENST00000458013 RSRC1Q96IZ7 334 aaKnown RBP21.91■■□□□ 1.1
SNX27-204ENST00000458013 ZBTB40Q9NUA8 1239 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 STK38LQ9Y2H1 464 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 PLCH2O75038 1416 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 ABCC1P33527 1531 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 GOLGA6CA6NDK9 693 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 GOLGA6DP0CG33 693 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 FYB2Q5VWT5 728 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 GOLGA6AQ9NYA3 693 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 TXNDC9O14530 226 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 GUCY2FP51841 1108 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 CTTNBP2NLQ9P2B4 639 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.91■■□□□ 1.1
SNX27-204ENST00000458013 ATXN8OSP0DMR3 200 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 CNNM4Q6P4Q7 775 aa21.91■■□□□ 1.1
SNX27-204ENST00000458013 ALDH3A1P30838 453 aa21.9■■□□□ 1.1
SNX27-204ENST00000458013 NEDD9Q14511 834 aa21.9■■□□□ 1.1
SNX27-204ENST00000458013 ANKRD42Q8N9B4 389 aa21.9■■□□□ 1.1
SNX27-204ENST00000458013 THOC2Q8NI27 1593 aaKnown RBP21.9■■□□□ 1.1
SNX27-204ENST00000458013 SOS1Q07889 1333 aaPredicted RBP21.9■■□□□ 1.1
SNX27-204ENST00000458013 CLUL1Q15846 466 aa21.9■■□□□ 1.1
SNX27-204ENST00000458013 TTC38Q5R3I4 469 aa21.9■■□□□ 1.1
SNX27-204ENST00000458013 DDX21Q9NR30 783 aaKnown RBP eCLIP21.9■■□□□ 1.1
SNX27-204ENST00000458013 KAT6BQ8WYB5 2073 aa21.9■■□□□ 1.1
SNX27-204ENST00000458013 FAM114A2Q9NRY5 505 aa21.9■■□□□ 1.1
SNX27-204ENST00000458013 TBC1D8O95759 1140 aa21.89■■□□□ 1.1
SNX27-204ENST00000458013 GPR161Q8N6U8 529 aaKnown RBP21.89■■□□□ 1.1
SNX27-204ENST00000458013 FRMPD2Q68DX3 1309 aaPredicted RBP21.89■■□□□ 1.1
SNX27-204ENST00000458013 ZNF75DP51815 510 aa21.89■■□□□ 1.1
SNX27-204ENST00000458013 ADAT2Q7Z6V5 191 aaKnown RBP21.89■■□□□ 1.1
SNX27-204ENST00000458013 MAPKAPK5Q8IW41 473 aa21.89■■□□□ 1.1
SNX27-204ENST00000458013 SNX29Q8TEQ0 813 aa21.89■■□□□ 1.1
SNX27-204ENST00000458013 DDX17Q92841 729 aaKnown RBP21.89■■□□□ 1.1
SNX27-204ENST00000458013 TNRQ92752 1358 aa21.89■■□□□ 1.1
SNX27-204ENST00000458013 GPAA1O43292 621 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 ZNF365Q70YC5 407 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 MRPL44Q9H9J2 332 aaKnown RBP21.89■■□□□ 1.09
SNX27-204ENST00000458013 VPS54Q9P1Q0 977 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 DEXIO95424 95 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 ANKRD2Q9GZV1 360 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 ARHGEF35A5YM69 484 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 NDUFAB1O14561 156 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 SATB1Q01826 763 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 LRRC43Q8N309 656 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 DENND2AQ9ULE3 1009 aa21.89■■□□□ 1.09
SNX27-204ENST00000458013 HOXC9P31274 260 aa21.88■■□□□ 1.09
SNX27-204ENST00000458013 PICK1Q9NRD5 415 aa21.88■■□□□ 1.09
SNX27-204ENST00000458013 PLCG2P16885 1265 aa21.88■■□□□ 1.09
SNX27-204ENST00000458013 TGFBRAP1Q8WUH2 860 aa21.88■■□□□ 1.09
SNX27-204ENST00000458013 HIBADHP31937 336 aaKnown RBP21.88■■□□□ 1.09
SNX27-204ENST00000458013 BTG4Q9NY30 223 aa21.88■■□□□ 1.09
SNX27-204ENST00000458013 ZNF202O95125 648 aa21.88■■□□□ 1.09
SNX27-204ENST00000458013 HMGB2P26583 209 aaKnown RBP21.88■■□□□ 1.09
SNX27-204ENST00000458013 PLCD1P51178 756 aa21.88■■□□□ 1.09
SNX27-204ENST00000458013 NOP56O00567 594 aaKnown RBP21.87■■□□□ 1.09
SNX27-204ENST00000458013 SMTNP53814 917 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 TRAPPC3LQ5T215 181 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 KIAA0586Q9BVV6 1533 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 TTC19Q6DKK2 380 aaPredicted RBP21.87■■□□□ 1.09
SNX27-204ENST00000458013 UBE2Q2Q8WVN8 375 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 FAM207AQ9NSI2 230 aaPredicted RBP21.87■■□□□ 1.09
SNX27-204ENST00000458013 NOD1Q9Y239 953 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 PDE1CQ14123 709 aaPredicted RBP21.87■■□□□ 1.09
SNX27-204ENST00000458013 CADPS2Q86UW7 1296 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 KIAA1524Q8TCG1 905 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 NOX5Q96PH1 765 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 LIN9Q5TKA1 542 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 UBL4BQ8N7F7 174 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 NLRC4Q9NPP4 1024 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 TMOD4Q9NZQ9 345 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 NLRP12P59046 1061 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 TRAF1Q13077 416 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 CCDC117Q8IWD4 279 aaPredicted RBP21.87■■□□□ 1.09
SNX27-204ENST00000458013 PPFIBP2Q8ND30 876 aa21.87■■□□□ 1.09
SNX27-204ENST00000458013 EDC3Q96F86 508 aaKnown RBP21.87■■□□□ 1.09
SNX27-204ENST00000458013 PTPN21Q16825 1174 aa21.86■■□□□ 1.09
SNX27-204ENST00000458013 DIS3L2Q8IYB7 885 aaKnown RBP21.86■■□□□ 1.09
SNX27-204ENST00000458013 SUCLG2Q96I99 432 aa21.86■■□□□ 1.09
SNX27-204ENST00000458013 RASSF4Q9H2L5 321 aa21.86■■□□□ 1.09
SNX27-204ENST00000458013 LGR6Q9HBX8 967 aa21.86■■□□□ 1.09
SNX27-204ENST00000458013 KDM5BQ9UGL1 1544 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms