RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 NOL9Q5SY16 702 aaKnown RBP19.33■□□□□ 0.68
CHCHD3-204ENST00000457942 SLAIN1Q8ND83 568 aa19.33■□□□□ 0.68
CHCHD3-204ENST00000457942 SSH3Q8TE77 659 aa19.33■□□□□ 0.68
CHCHD3-204ENST00000457942 FAM163AQ96GL9 167 aaPredicted RBP19.33■□□□□ 0.68
CHCHD3-204ENST00000457942 DDX4Q9NQI0 724 aaKnown RBP19.33■□□□□ 0.68
CHCHD3-204ENST00000457942 FPGT-TNNI3KV9GXZ4 949 aa19.33■□□□□ 0.68
CHCHD3-204ENST00000457942 DOCK1Q14185 1865 aa19.33■□□□□ 0.68
CHCHD3-204ENST00000457942 GPR75-ASB3A0A0A6YYF3 556 aa19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 ADCY3O60266 1144 aa19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 GPAT2Q6NUI2 795 aa19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 GADL1Q6ZQY3 521 aa19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 NSUN4Q96CB9 384 aaKnown RBP19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 DEFB118Q96PH6 123 aa19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 DBNDD2Q9BQY9 259 aa19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 GPR108Q9NPR9 543 aa19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 SNRKQ9NRH2 765 aa19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 STAP2Q9UGK3 403 aa19.32■□□□□ 0.68
CHCHD3-204ENST00000457942 DDTLA6NHG4 134 aaPredicted RBP19.31■□□□□ 0.68
CHCHD3-204ENST00000457942 BCRP11274 1271 aa19.31■□□□□ 0.68
CHCHD3-204ENST00000457942 SH3BP5LQ7L8J4 393 aa19.31■□□□□ 0.68
CHCHD3-204ENST00000457942 SCYL3Q8IZE3 742 aa19.31■□□□□ 0.68
CHCHD3-204ENST00000457942 ATRNL1Q5VV63 1379 aa19.31■□□□□ 0.68
CHCHD3-204ENST00000457942 ALPK3Q96L96 1907 aa19.3■□□□□ 0.68
CHCHD3-204ENST00000457942 SGPL1O95470 568 aa19.3■□□□□ 0.68
CHCHD3-204ENST00000457942 TFRCP02786 760 aaKnown RBP19.3■□□□□ 0.68
CHCHD3-204ENST00000457942 FLT3LGP49771 235 aa19.3■□□□□ 0.68
CHCHD3-204ENST00000457942 PANK1Q8TE04 598 aa19.3■□□□□ 0.68
CHCHD3-204ENST00000457942 ZNF384Q8TF68 577 aa19.3■□□□□ 0.68
CHCHD3-204ENST00000457942 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.3■□□□□ 0.68
CHCHD3-204ENST00000457942 ZHX2Q9Y6X8 837 aa19.3■□□□□ 0.68
CHCHD3-204ENST00000457942 SLURP2P0DP57 97 aa19.29■□□□□ 0.68
CHCHD3-204ENST00000457942 RHBDL3P58872 404 aa19.29■□□□□ 0.68
CHCHD3-204ENST00000457942 NAA16Q6N069 864 aaPredicted RBP19.29■□□□□ 0.68
CHCHD3-204ENST00000457942 TEX11Q8IYF3 940 aa19.29■□□□□ 0.68
CHCHD3-204ENST00000457942 DIS3LQ8TF46 1054 aaKnown RBP19.29■□□□□ 0.68
CHCHD3-204ENST00000457942 PHF20L1A8MW92 1017 aa19.28■□□□□ 0.68
CHCHD3-204ENST00000457942 TNPO2O14787 897 aaKnown RBP19.28■□□□□ 0.68
CHCHD3-204ENST00000457942 MAP4K4O95819 1239 aaPredicted RBP19.28■□□□□ 0.68
CHCHD3-204ENST00000457942 CCDC84Q86UT8 332 aaPredicted RBP19.28■□□□□ 0.68
CHCHD3-204ENST00000457942 C7orf61Q8IZ16 206 aa19.28■□□□□ 0.68
CHCHD3-204ENST00000457942 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.28■□□□□ 0.68
CHCHD3-204ENST00000457942 ZMYND8Q9ULU4 1186 aaPredicted RBP19.28■□□□□ 0.68
CHCHD3-204ENST00000457942 MYO5AQ9Y4I1 1855 aaKnown RBP19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 FAM196BA6NMK8 535 aa19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 CXCL11O14625 94 aa19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 BAG3O95817 575 aa19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 MS4A1P11836 297 aa19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 CEP85Q6P2H3 762 aa19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 SMCR8Q8TEV9 937 aaPredicted RBP19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 PAWRQ96IZ0 340 aaKnown RBP19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 CCDC8Q9H0W5 538 aaPredicted RBP19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 OSBPL5Q9H0X9 879 aaPredicted RBP19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 AATFQ9NY61 560 aaKnown RBP eCLIP19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 ATAD5Q96QE3 1844 aa19.27■□□□□ 0.68
CHCHD3-204ENST00000457942 PTPRFP10586 1907 aa19.26■□□□□ 0.67
CHCHD3-204ENST00000457942 CTNND1O60716 968 aaKnown RBP19.26■□□□□ 0.67
CHCHD3-204ENST00000457942 PTPRAP18433 802 aa19.26■□□□□ 0.67
CHCHD3-204ENST00000457942 Q7L0L9 218 aa19.26■□□□□ 0.67
CHCHD3-204ENST00000457942 FASTKD5Q7L8L6 764 aaKnown RBP19.26■□□□□ 0.67
CHCHD3-204ENST00000457942 SH3RF3Q8TEJ3 882 aaPredicted RBP19.26■□□□□ 0.67
CHCHD3-204ENST00000457942 TLR7Q9NYK1 1049 aaKnown RBP19.26■□□□□ 0.67
CHCHD3-204ENST00000457942 DBNLQ9UJU6 430 aaKnown RBP19.26■□□□□ 0.67
CHCHD3-204ENST00000457942 NOP58Q9Y2X3 529 aaKnown RBP19.26■□□□□ 0.67
CHCHD3-204ENST00000457942 COL2A1P02458 1487 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-204ENST00000457942 A0A0G2JLL6 359 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-204ENST00000457942 TRIM75PA6NK02 468 aa19.25■□□□□ 0.67
CHCHD3-204ENST00000457942 NPM3O75607 178 aaKnown RBP19.25■□□□□ 0.67
CHCHD3-204ENST00000457942 PLCG2P16885 1265 aa19.25■□□□□ 0.67
CHCHD3-204ENST00000457942 ZAP70P43403 619 aa19.25■□□□□ 0.67
CHCHD3-204ENST00000457942 PRRT2Q7Z6L0 340 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-204ENST00000457942 EXOC6BQ9Y2D4 811 aa19.25■□□□□ 0.67
CHCHD3-204ENST00000457942 PHIPQ8WWQ0 1821 aa19.25■□□□□ 0.67
CHCHD3-204ENST00000457942 CUL9Q8IWT3 2517 aa19.24■□□□□ 0.67
CHCHD3-204ENST00000457942 A0A1W2PPC1 479 aa19.24■□□□□ 0.67
CHCHD3-204ENST00000457942 CYP2E1P05181 493 aaPredicted RBP19.24■□□□□ 0.67
CHCHD3-204ENST00000457942 SYN1P17600 705 aa19.24■□□□□ 0.67
CHCHD3-204ENST00000457942 ERC1Q8IUD2 1116 aa19.24■□□□□ 0.67
CHCHD3-204ENST00000457942 TRIM34Q9BYJ4 488 aa19.24■□□□□ 0.67
CHCHD3-204ENST00000457942 CDK5RAP2Q96SN8 1893 aa19.24■□□□□ 0.67
CHCHD3-204ENST00000457942 TBC1D12O60347 775 aa19.23■□□□□ 0.67
CHCHD3-204ENST00000457942 MAP3K10Q02779 954 aa19.23■□□□□ 0.67
CHCHD3-204ENST00000457942 AACSQ86V21 672 aa19.23■□□□□ 0.67
CHCHD3-204ENST00000457942 ANKRD13CQ8N6S4 541 aa19.23■□□□□ 0.67
CHCHD3-204ENST00000457942 BCL11AQ9H165 835 aa19.23■□□□□ 0.67
CHCHD3-204ENST00000457942 AFG3L2Q9Y4W6 797 aa19.23■□□□□ 0.67
CHCHD3-204ENST00000457942 UNC80Q8N2C7 3258 aa19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 IDH1O75874 414 aaKnown RBP19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 MAPKAPK5Q8IW41 473 aa19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 DEFB123Q8N688 67 aa19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 TGFBRAP1Q8WUH2 860 aa19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 EAF2Q96CJ1 260 aaPredicted RBP19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 ZNF512BQ96KM6 892 aaPredicted RBP19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 PIH1D3Q9NQM4 214 aaKnown RBP19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 PAK6Q9NQU5 681 aaPredicted RBP19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 FOCADQ5VW36 1801 aa19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 DDX60LQ5H9U9 1706 aaKnown RBP19.22■□□□□ 0.67
CHCHD3-204ENST00000457942 APBB1O00213 710 aa19.21■□□□□ 0.67
CHCHD3-204ENST00000457942 HSP90AB4PQ58FF6 505 aa19.21■□□□□ 0.67
CHCHD3-204ENST00000457942 TREML2Q5T2D2 321 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms