RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 TNIP1Q15025 636 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 RSBN1LQ6PCB5 846 aaPredicted RBP10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 TBC1D10CQ8IV04 446 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 TEX11Q8IYF3 940 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 AGBL3Q8NEM8 1001 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 SDR42E1Q8WUS8 393 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 ESR2Q92731 530 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 NBPF3Q9H094 633 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 ZNF277Q9NRM2 450 aaPredicted RBP10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 CHMP5Q9NZZ3 219 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 HDAC9Q9UKV0 1011 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 BCS1LQ9Y276 419 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 TAF6LQ9Y6J9 622 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 NFKBIEO00221 500 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 ORC4O43929 436 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 DDIT3P35638 169 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 CRKP46108 304 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 RCAN1P53805 252 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 RHBDL3P58872 404 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 PDE4BQ07343 736 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 GRIK5Q16478 980 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 CTR9Q6PD62 1173 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 TMTC2Q8N394 836 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 OGFOD1Q8N543 542 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 SH3RF3Q8TEJ3 882 aaPredicted RBP10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 SPOCK2Q92563 424 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 ZNF274Q96GC6 653 aaPredicted RBP10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 NAV1Q8NEY1 1877 aa10.51□□□□□ -0.73
CDC42EP3-204ENST00000457889 DDX60LQ5H9U9 1706 aaKnown RBP10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 COL2A1P02458 1487 aaPredicted RBP10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 FOCADQ5VW36 1801 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 YDJCA8MPS7 323 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 USP17L12C9JPN9 530 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 USP17L21D6R901 530 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 PRC1O43663 620 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 LIFRP42702 1097 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 EMP3P54852 163 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 TOB2Q14106 344 aaPredicted RBP10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 CCDC178Q5BJE1 867 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 C12orf60Q5U649 245 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 Q6ZUG5 572 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 GMLQ99445 158 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 MCM9Q9NXL9 1143 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 ANGEL1Q9UNK9 670 aaKnown RBP10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 FLT1P17948 1338 aa10.5□□□□□ -0.73
CDC42EP3-204ENST00000457889 ERICH2A1L162 156 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 MINDY4BA8MYZ0 360 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 DHX16O60231 1041 aaKnown RBP10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 CPA1P15085 419 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 NUCB2P80303 420 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 CIAPIN1Q6FI81 312 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 APOBEC3HQ6NTF7 200 aaKnown RBP10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 ILDR2Q71H61 639 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 TTC6Q86TZ1 520 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 SGMS1Q86VZ5 419 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 MTMR14Q8NCE2 650 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 BRF1Q92994 677 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 LLPHQ9BRT6 129 aaKnown RBP10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 IDI2Q9BXS1 227 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 DHX36Q9H2U1 1008 aaKnown RBP10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 RTN4Q9NQC3 1192 aaKnown RBP10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 KIF3AQ9Y496 699 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 NEDD4P46934 1319 aa10.49□□□□□ -0.73
CDC42EP3-204ENST00000457889 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 PSMD14O00487 310 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 SH2B2O14492 632 aaPredicted RBP10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 PFKFB2O60825 505 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 CTDSPL2Q05D32 466 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 PPP2R5BQ15173 497 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 FKBP1CQ5VVH2 108 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 IQCA1Q86XH1 822 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 KIAA0825Q8IV33 1275 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 NLGN2Q8NFZ4 835 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 TGFBRAP1Q8WUH2 860 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 UBAC1Q9BSL1 405 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 FHDC1Q9C0D6 1143 aaPredicted RBP10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 EHD4Q9H223 541 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 SLKQ9H2G2 1235 aaPredicted RBP10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 USP40Q9NVE5 1235 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 TMOD2Q9NZR1 351 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 TPCN1Q9ULQ1 816 aa10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 BAZ2AQ9UIF9 1905 aaKnown RBP10.48□□□□□ -0.73
CDC42EP3-204ENST00000457889 COL4A5P29400 1685 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 CDK5RAP2Q96SN8 1893 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 B4E1Z4 1266 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 F8W031 263 aaPredicted RBP10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 FZD9O00144 591 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 KDM4AO75164 1064 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 ENTPD3O75355 529 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 WDHD1O75717 1129 aaPredicted RBP10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 POLR3DP05423 398 aaPredicted RBP10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 HLA-DOAP06340 250 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 USP17L8P0C7I0 530 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 LMNB1P20700 586 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 PDCP20941 246 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 SCNN1DP51172 638 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 EIF6P56537 245 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms