RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 CDC45O75419 566 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 TDO2P48775 406 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 HUNKP57058 714 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 C12orf60Q5U649 245 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.83■□□□□ 0.28
TIMP1-205ENST00000456754 TICAM2Q86XR7 235 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 C2orf69Q8N8R5 385 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 ZKSCAN4Q969J2 545 aaPredicted RBP16.83■□□□□ 0.28
TIMP1-205ENST00000456754 ATAD5Q96QE3 1844 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 INCENPQ9NQS7 918 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 PI4KBQ9UBF8 816 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 FGAP02671 866 aa16.82■□□□□ 0.28
TIMP1-205ENST00000456754 GNAT2P19087 354 aa16.82■□□□□ 0.28
TIMP1-205ENST00000456754 CCDC84Q86UT8 332 aaPredicted RBP16.82■□□□□ 0.28
TIMP1-205ENST00000456754 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.82■□□□□ 0.28
TIMP1-205ENST00000456754 KLRG1Q96E93 195 aa16.82■□□□□ 0.28
TIMP1-205ENST00000456754 WRNIP1Q96S55 665 aa16.82■□□□□ 0.28
TIMP1-205ENST00000456754 ZNF341Q9BYN7 854 aa16.82■□□□□ 0.28
TIMP1-205ENST00000456754 DHX36Q9H2U1 1008 aaKnown RBP16.82■□□□□ 0.28
TIMP1-205ENST00000456754 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.82■□□□□ 0.28
TIMP1-205ENST00000456754 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
TIMP1-205ENST00000456754 MYH8P13535 1937 aa16.82■□□□□ 0.28
TIMP1-205ENST00000456754 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 HAND2P61296 217 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 MAP3K10Q02779 954 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 GABPAQ06546 454 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 VGLL4Q14135 290 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 MAP3K11Q16584 847 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 LDLRAD1Q5T700 205 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 ARMC9Q7Z3E5 817 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 NKX2-3Q8TAU0 364 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 NBPF3Q9H094 633 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 NAPBQ9H115 298 aa16.81■□□□□ 0.28
TIMP1-205ENST00000456754 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 RAD50Q92878 1312 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 PPP1R12BO60237 982 aaPredicted RBP16.8■□□□□ 0.28
TIMP1-205ENST00000456754 GDF11O95390 407 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 SHMT1P34896 483 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 MKRN3Q13064 507 aaKnown RBP16.8■□□□□ 0.28
TIMP1-205ENST00000456754 GRM1Q13255 1194 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 DCAF15Q66K64 600 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 CYP4F22Q6NT55 531 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 TTC6Q86TZ1 520 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 METTL16Q86W50 562 aaKnown RBP16.8■□□□□ 0.28
TIMP1-205ENST00000456754 CRACR2BQ8N4Y2 399 aaPredicted RBP16.8■□□□□ 0.28
TIMP1-205ENST00000456754 ELP3Q9H9T3 547 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 ARPP21Q9UBL0 812 aaPredicted RBP16.8■□□□□ 0.28
TIMP1-205ENST00000456754 SERPINB13Q9UIV8 391 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 ZNF112Q9UJU3 913 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 SNCAIPQ9Y6H5 919 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 LAMA4Q16363 1823 aa16.8■□□□□ 0.28
TIMP1-205ENST00000456754 TBC1D12O60347 775 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 GJA5P36382 358 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 IREB2P48200 963 aaKnown RBP16.79■□□□□ 0.28
TIMP1-205ENST00000456754 MAP3K9P80192 1104 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 PPARAQ07869 468 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 SBK1Q52WX2 424 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 GIMAP6Q6P9H5 292 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 PAXIP1Q6ZW49 1069 aaPredicted RBP16.79■□□□□ 0.28
TIMP1-205ENST00000456754 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 ZIC5Q96T25 663 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 LSG1Q9H089 658 aaKnown RBP16.79■□□□□ 0.28
TIMP1-205ENST00000456754 EHD4Q9H223 541 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 TAF6LQ9Y6J9 622 aa16.79■□□□□ 0.28
TIMP1-205ENST00000456754 PHIPQ8WWQ0 1821 aa16.78■□□□□ 0.28
TIMP1-205ENST00000456754 PRDM1O75626 825 aa16.78■□□□□ 0.28
TIMP1-205ENST00000456754 CDK8P49336 464 aa16.78■□□□□ 0.28
TIMP1-205ENST00000456754 FKBP1BP68106 108 aa16.78■□□□□ 0.28
TIMP1-205ENST00000456754 ALX1Q15699 326 aa16.78■□□□□ 0.28
TIMP1-205ENST00000456754 TBC1D10CQ8IV04 446 aa16.78■□□□□ 0.28
TIMP1-205ENST00000456754 FOXP4Q8IVH2 680 aaPredicted RBP16.78■□□□□ 0.28
TIMP1-205ENST00000456754 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
TIMP1-205ENST00000456754 NACAP1Q9BZK3 213 aa16.78■□□□□ 0.28
TIMP1-205ENST00000456754 RASSF10A6NK89 507 aa16.77■□□□□ 0.28
TIMP1-205ENST00000456754 RGMBQ6NW40 437 aa16.77■□□□□ 0.28
TIMP1-205ENST00000456754 C16orf86Q6ZW13 317 aa16.77■□□□□ 0.28
TIMP1-205ENST00000456754 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.28
TIMP1-205ENST00000456754 CLEC10AQ8IUN9 316 aa16.77■□□□□ 0.28
TIMP1-205ENST00000456754 ANKRD13AQ8IZ07 590 aa16.77■□□□□ 0.28
TIMP1-205ENST00000456754 HOOK2Q96ED9 719 aa16.77■□□□□ 0.28
TIMP1-205ENST00000456754 DSCC1Q9BVC3 393 aa16.77■□□□□ 0.28
TIMP1-205ENST00000456754 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
TIMP1-205ENST00000456754 HERC5Q9UII4 1024 aaKnown RBP16.77■□□□□ 0.28
TIMP1-205ENST00000456754 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.27
TIMP1-205ENST00000456754 FAM155AB1AL88 458 aaPredicted RBP16.76■□□□□ 0.27
TIMP1-205ENST00000456754 AOC2O75106 756 aa16.76■□□□□ 0.27
TIMP1-205ENST00000456754 AKR1B1P15121 316 aa16.76■□□□□ 0.27
TIMP1-205ENST00000456754 ZNF157P51786 506 aaPredicted RBP16.76■□□□□ 0.27
TIMP1-205ENST00000456754 MFAP1P55081 439 aaKnown RBP16.76■□□□□ 0.27
TIMP1-205ENST00000456754 DEFB115Q30KQ5 88 aa16.76■□□□□ 0.27
TIMP1-205ENST00000456754 TATDN1Q6P1N9 297 aa16.76■□□□□ 0.27
TIMP1-205ENST00000456754 ANO2Q9NQ90 1003 aa16.76■□□□□ 0.27
TIMP1-205ENST00000456754 GUCY1A2P33402 732 aa16.75■□□□□ 0.27
TIMP1-205ENST00000456754 CAP2P40123 477 aa16.75■□□□□ 0.27
TIMP1-205ENST00000456754 VEGFBP49765 207 aa16.75■□□□□ 0.27
TIMP1-205ENST00000456754 AMOTL1Q8IY63 956 aa16.75■□□□□ 0.27
TIMP1-205ENST00000456754 SCYL3Q8IZE3 742 aa16.75■□□□□ 0.27
TIMP1-205ENST00000456754 RBM8AQ9Y5S9 174 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms