RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 KCNB2Q92953 911 aa12.79□□□□□ -0.36
SYPL1-202ENST00000455385 PI4KBQ9UBF8 816 aa12.79□□□□□ -0.36
SYPL1-202ENST00000455385 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
SYPL1-202ENST00000455385 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
SYPL1-202ENST00000455385 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
SYPL1-202ENST00000455385 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
SYPL1-202ENST00000455385 TRAF5O00463 557 aa12.78□□□□□ -0.36
SYPL1-202ENST00000455385 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
SYPL1-202ENST00000455385 IMMTQ16891 758 aaKnown RBP12.78□□□□□ -0.36
SYPL1-202ENST00000455385 MIGA2Q7L4E1 593 aa12.78□□□□□ -0.36
SYPL1-202ENST00000455385 SLC44A5Q8NCS7 719 aa12.78□□□□□ -0.36
SYPL1-202ENST00000455385 DNAJC18Q9H819 358 aa12.78□□□□□ -0.36
SYPL1-202ENST00000455385 STOX1Q6ZVD7 989 aa12.77□□□□□ -0.36
SYPL1-202ENST00000455385 METTL16Q86W50 562 aaKnown RBP12.77□□□□□ -0.36
SYPL1-202ENST00000455385 FOXP4Q8IVH2 680 aaPredicted RBP12.77□□□□□ -0.36
SYPL1-202ENST00000455385 FZD1Q9UP38 647 aa12.77□□□□□ -0.36
SYPL1-202ENST00000455385 PPP2R3BQ9Y5P8 575 aa12.77□□□□□ -0.36
SYPL1-202ENST00000455385 EIF5BO60841 1220 aaKnown RBP12.77□□□□□ -0.37
SYPL1-202ENST00000455385 ITGBL1O95965 494 aaPredicted RBP12.77□□□□□ -0.37
SYPL1-202ENST00000455385 HLA-DOAP06340 250 aa12.77□□□□□ -0.37
SYPL1-202ENST00000455385 MAP3K10Q02779 954 aa12.77□□□□□ -0.37
SYPL1-202ENST00000455385 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
SYPL1-202ENST00000455385 SERPINB13Q9UIV8 391 aa12.77□□□□□ -0.37
SYPL1-202ENST00000455385 SNX14Q9Y5W7 946 aa12.77□□□□□ -0.37
SYPL1-202ENST00000455385 FGRP09769 529 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 CDK8P49336 464 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 RRP1BQ14684 758 aaKnown RBP12.76□□□□□ -0.37
SYPL1-202ENST00000455385 ADCK5Q3MIX3 580 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 C16orf86Q6ZW13 317 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 AMOTL1Q8IY63 956 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 CDCA5Q96FF9 252 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 C22orf23Q9BZE7 217 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 EHD4Q9H223 541 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 ROBO3Q96MS0 1386 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 SSC5DA1L4H1 1573 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 PRDM1O75626 825 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 TSGA10IPQ3SY00 556 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
SYPL1-202ENST00000455385 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
SYPL1-202ENST00000455385 LAMB1P07942 1786 aa12.75□□□□□ -0.37
SYPL1-202ENST00000455385 E7EWF7 191 aa12.75□□□□□ -0.37
SYPL1-202ENST00000455385 TBC1D12O60347 775 aa12.75□□□□□ -0.37
SYPL1-202ENST00000455385 SHMT1P34896 483 aa12.75□□□□□ -0.37
SYPL1-202ENST00000455385 STAG1Q8WVM7 1258 aa12.75□□□□□ -0.37
SYPL1-202ENST00000455385 LAMA4Q16363 1823 aa12.74□□□□□ -0.37
SYPL1-202ENST00000455385 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
SYPL1-202ENST00000455385 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
SYPL1-202ENST00000455385 RNF20Q5VTR2 975 aa12.74□□□□□ -0.37
SYPL1-202ENST00000455385 CRACR2BQ8N4Y2 399 aaPredicted RBP12.74□□□□□ -0.37
SYPL1-202ENST00000455385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.74□□□□□ -0.37
SYPL1-202ENST00000455385 HERC5Q9UII4 1024 aaKnown RBP12.74□□□□□ -0.37
SYPL1-202ENST00000455385 NEDD4P46934 1319 aa12.74□□□□□ -0.37
SYPL1-202ENST00000455385 PHF20L1A8MW92 1017 aa12.74□□□□□ -0.37
SYPL1-202ENST00000455385 JAG1P78504 1218 aa12.74□□□□□ -0.37
SYPL1-202ENST00000455385 SHROOM1Q2M3G4 852 aaPredicted RBP12.74□□□□□ -0.37
SYPL1-202ENST00000455385 MFSD6Q6ZSS7 791 aa12.74□□□□□ -0.37
SYPL1-202ENST00000455385 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
SYPL1-202ENST00000455385 KIF2CQ99661 725 aa12.74□□□□□ -0.37
SYPL1-202ENST00000455385 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
SYPL1-202ENST00000455385 ZKSCAN1P17029 563 aaPredicted RBP12.73□□□□□ -0.37
SYPL1-202ENST00000455385 RASA1P20936 1047 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 MCCP23508 829 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 PRKG1Q13976 671 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 TATDN1Q6P1N9 297 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
SYPL1-202ENST00000455385 ORC4O43929 436 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 TOMM70O94826 608 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
SYPL1-202ENST00000455385 PDE4BQ07343 736 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 RRP12Q5JTH9 1297 aaKnown RBP12.73□□□□□ -0.37
SYPL1-202ENST00000455385 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 IL17RAQ96F46 866 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 SWAP70Q9UH65 585 aa12.73□□□□□ -0.37
SYPL1-202ENST00000455385 B4E1Z4 1266 aa12.72□□□□□ -0.37
SYPL1-202ENST00000455385 FAM47AQ5JRC9 791 aa12.72□□□□□ -0.37
SYPL1-202ENST00000455385 CST9Q5W186 159 aa12.72□□□□□ -0.37
SYPL1-202ENST00000455385 RNF41Q9H4P4 317 aaPredicted RBP12.72□□□□□ -0.37
SYPL1-202ENST00000455385 TOMM22Q9NS69 142 aa12.72□□□□□ -0.37
SYPL1-202ENST00000455385 ZSWIM5Q9P217 1185 aa12.72□□□□□ -0.37
SYPL1-202ENST00000455385 ZNF112Q9UJU3 913 aa12.72□□□□□ -0.37
SYPL1-202ENST00000455385 KDM4AO75164 1064 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 CPA1P15085 419 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 ANAPC15P60006 121 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 DCAF15Q66K64 600 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 CYB5R4Q7L1T6 521 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
SYPL1-202ENST00000455385 KLRG1Q96E93 195 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.71□□□□□ -0.37
SYPL1-202ENST00000455385 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 RANBP6O60518 1105 aaKnown RBP12.71□□□□□ -0.37
SYPL1-202ENST00000455385 PCP11498 1178 aaKnown RBP12.71□□□□□ -0.37
SYPL1-202ENST00000455385 AKR1B1P15121 316 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 INPP5BP32019 993 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 TFAP4Q01664 338 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 CERKLQ49MI3 558 aaPredicted RBP12.71□□□□□ -0.37
SYPL1-202ENST00000455385 CHST3Q7LGC8 479 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 MB21D2Q8IYB1 491 aaPredicted RBP12.71□□□□□ -0.37
SYPL1-202ENST00000455385 ZNF444Q8N0Y2 327 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms