RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 PDLIM2Q96JY6 352 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 TNMDQ9H2S6 317 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 CLSTN2Q9H4D0 955 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 POLLQ9UGP5 575 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.28□□□□□ -0.76
RPE-216ENST00000454822 CLIC4Q9Y696 253 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 CCDC196A0A1B0GTZ2 297 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 UBE2Q2LH0YL09 131 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 ORC4O43929 436 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 ME1P48163 572 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 NBPF11Q86T75 865 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 CRACR2BQ8N4Y2 399 aaPredicted RBP10.28□□□□□ -0.76
RPE-216ENST00000454822 LINC00301Q8NCQ3 95 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 ARPP21Q9UBL0 812 aaPredicted RBP10.28□□□□□ -0.76
RPE-216ENST00000454822 LDHCP07864 332 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 SLC3A2P08195 630 aaKnown RBP10.27□□□□□ -0.77
RPE-216ENST00000454822 CCDC192P0DO97 292 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 GUCY1A2P33402 732 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 PPP4CP60510 307 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 TRIM29Q14134 588 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 DIXDC1Q155Q3 683 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 RBM43Q6ZSC3 357 aaKnown RBP10.27□□□□□ -0.77
RPE-216ENST00000454822 TMC4Q7Z404 712 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 IQCA1Q86XH1 822 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 SH3RF3Q8TEJ3 882 aaPredicted RBP10.27□□□□□ -0.77
RPE-216ENST00000454822 WASF1Q92558 559 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 RRAGDQ9NQL2 400 aaPredicted RBP10.27□□□□□ -0.77
RPE-216ENST00000454822 POLR3EQ9NVU0 708 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 MCM9Q9NXL9 1143 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 MKRN1Q9UHC7 482 aaKnown RBP10.27□□□□□ -0.77
RPE-216ENST00000454822 TAOK2Q9UL54 1235 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 PCDHA7Q9UN72 937 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 MAST2Q6P0Q8 1798 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 DUOX1Q9NRD9 1551 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 C6orf229H3BNL8 230 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 PPEF1O14829 653 aaPredicted RBP10.27□□□□□ -0.77
RPE-216ENST00000454822 YEATS4O95619 227 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 BAG3O95817 575 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 USP17L8P0C7I0 530 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 USP5P45974 858 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 PPP2R5BQ15173 497 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 STK38Q15208 465 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 IFIT1BQ5T764 474 aaKnown RBP10.27□□□□□ -0.77
RPE-216ENST00000454822 ANO1Q5XXA6 986 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 CKAP2LQ8IYA6 745 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 TRIM22Q8IYM9 498 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 CMTR1Q8N1G2 835 aaKnown RBP10.27□□□□□ -0.77
RPE-216ENST00000454822 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 GOLPH3LQ9H4A5 285 aa10.27□□□□□ -0.77
RPE-216ENST00000454822 U2AF2P26368 475 aaKnown RBP eCLIP10.26□□□□□ -0.776e-8■■■□□ 15
RPE-216ENST00000454822 RXRBP28702 533 aa10.26□□□□□ -0.77
RPE-216ENST00000454822 SNW1Q13573 536 aaKnown RBP10.26□□□□□ -0.77
RPE-216ENST00000454822 SF3A1Q15459 793 aaKnown RBP10.26□□□□□ -0.77
RPE-216ENST00000454822 FAM47AQ5JRC9 791 aa10.26□□□□□ -0.77
RPE-216ENST00000454822 C12orf60Q5U649 245 aa10.26□□□□□ -0.77
RPE-216ENST00000454822 ADALQ6DHV7 355 aa10.26□□□□□ -0.77
RPE-216ENST00000454822 CATIPQ7Z7H3 387 aa10.26□□□□□ -0.77
RPE-216ENST00000454822 FLAD1Q8NFF5 587 aa10.26□□□□□ -0.77
RPE-216ENST00000454822 ENGASEQ8NFI3 743 aa10.26□□□□□ -0.77
RPE-216ENST00000454822 KCNG4Q8TDN1 519 aa10.26□□□□□ -0.77
RPE-216ENST00000454822 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.26□□□□□ -0.77
RPE-216ENST00000454822 ATP6V0A2Q9Y487 856 aa10.26□□□□□ -0.77
RPE-216ENST00000454822 A0A1W2PQ27 194 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 A0A1W2PQ64 194 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 A0A1W2PQD8 194 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 SPTLC2O15270 562 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 DEXIO95424 95 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 SRGNP10124 158 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 TYRO3Q06418 890 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 PDE4BQ07343 736 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 GNL2Q13823 731 aaKnown RBP10.25□□□□□ -0.77
RPE-216ENST00000454822 CCDC73Q6ZRK6 1079 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 FSIP1Q8NA03 581 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 NOL10Q9BSC4 688 aaKnown RBP10.25□□□□□ -0.77
RPE-216ENST00000454822 MROH7-TTC4A0A0A0MT08 1334 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 KIAA1551Q9HCM1 1747 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 NMT2O60551 498 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 NPR1P16066 1061 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 FAM160A1Q05DH4 1040 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 TROAPQ12815 778 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 TGFBRAP1Q8WUH2 860 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 RTFDC1Q9BY42 306 aaPredicted RBP10.25□□□□□ -0.77
RPE-216ENST00000454822 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
RPE-216ENST00000454822 ECM29Q5VYK3 1845 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 GPR75-ASB3A0A0A6YYF3 556 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 ESPNB1AK53 854 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 RIMBP2O15034 1052 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 MMP10P09238 476 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 CALM1P0DP23 149 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 CALM2P0DP24 149 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 CALM3P0DP25 149 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 SLC39A14Q15043 492 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 SLC4A8Q2Y0W8 1093 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 MFSD14BQ5SR56 506 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 TBC1D22AQ8WUA7 517 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 MRPS27Q92552 414 aaKnown RBP10.24□□□□□ -0.77
RPE-216ENST00000454822 RNF26Q9BY78 433 aaPredicted RBP10.24□□□□□ -0.77
RPE-216ENST00000454822 KCNJ14Q9UNX9 436 aa10.24□□□□□ -0.77
RPE-216ENST00000454822 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms