RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 IDI2Q9BXS1 227 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 LY9Q9HBG7 655 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 SENP2Q9HC62 589 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 CWC22Q9HCG8 908 aaKnown RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 CHMP5Q9NZZ3 219 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 SAP30BPQ9UHR5 308 aaKnown RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 CIZ1Q9ULV3 898 aaPredicted RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 ATAD5Q96QE3 1844 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 POLR3DP05423 398 aaPredicted RBP7.07□□□□□ -1.28
SDC4P-201ENST00000453285 HSP90AA1P07900 732 aaKnown RBP7.07□□□□□ -1.28
SDC4P-201ENST00000453285 LIFRP42702 1097 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 GABPAQ06546 454 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 SCRN1Q12765 414 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 NFIAQ12857 509 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 SEC23AQ15436 765 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 SLC4A8Q2Y0W8 1093 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 RRP12Q5JTH9 1297 aaKnown RBP7.07□□□□□ -1.28
SDC4P-201ENST00000453285 C16orf86Q6ZW13 317 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 SGMS1Q86VZ5 419 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 MTMR14Q8NCE2 650 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 JDP2Q8WYK2 163 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 ESR2Q92731 530 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 GTF3C6Q969F1 213 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 OSBPL5Q9H0X9 879 aaPredicted RBP7.07□□□□□ -1.28
SDC4P-201ENST00000453285 TDRD3Q9H7E2 651 aaKnown RBP7.07□□□□□ -1.28
SDC4P-201ENST00000453285 FAM198AQ9UFP1 575 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 ANGEL1Q9UNK9 670 aaKnown RBP7.07□□□□□ -1.28
SDC4P-201ENST00000453285 HPS5Q9UPZ3 1129 aa7.07□□□□□ -1.28
SDC4P-201ENST00000453285 COL2A1P02458 1487 aaPredicted RBP7.06□□□□□ -1.28
SDC4P-201ENST00000453285 KLF18A0A0U1RQI7 1052 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 SHTN1A0MZ66 631 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 SPDYE2BA6NHP3 402 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 IFIT3O14879 490 aaKnown RBP7.06□□□□□ -1.28
SDC4P-201ENST00000453285 DTNBO60941 627 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 PRDM1O75626 825 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 CTDNEP1O95476 244 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 SLC3A2P08195 630 aaKnown RBP7.06□□□□□ -1.28
SDC4P-201ENST00000453285 SPDYE6P0CI01 402 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 YBX3P16989 372 aaKnown RBP eCLIP7.06□□□□□ -1.28
SDC4P-201ENST00000453285 RASA1P20936 1047 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 CDK8P49336 464 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 NT5C2P49902 561 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 RBM5P52756 815 aaKnown RBP eCLIP7.06□□□□□ -1.28
SDC4P-201ENST00000453285 CACNB3P54284 484 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 ZNF280AP59817 542 aaPredicted RBP7.06□□□□□ -1.28
SDC4P-201ENST00000453285 FGD1P98174 961 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 PDE4BQ07343 736 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 STK3Q13188 491 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 PICALMQ13492 652 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 PKP1Q13835 747 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 TNIP1Q15025 636 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 RAB3GAP1Q15042 981 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 TMEM67Q5HYA8 995 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 ARHGAP27Q6ZUM4 889 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 SH3BP5LQ7L8J4 393 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 SLC44A5Q8NCS7 719 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 SMARCC2Q8TAQ2 1214 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 ZKSCAN3Q9BRR0 538 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 TOMM22Q9NS69 142 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 HDAC9Q9UKV0 1011 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 ZDHHC9Q9Y397 364 aa7.06□□□□□ -1.28
SDC4P-201ENST00000453285 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.06□□□□□ -1.28
SDC4P-201ENST00000453285 ZNF541Q9H0D2 1346 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 DDTLA6NHG4 134 aaPredicted RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 RANBP6O60518 1105 aaKnown RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 ENTPD3O75355 529 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 LMNB1P20700 586 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 RPS12P25398 132 aaKnown RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 GJB2P29033 226 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 MMP14P50281 582 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 EIF6P56537 245 aaKnown RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 CCT2P78371 535 aaKnown RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 WTAPQ15007 396 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 DLGAP5Q15398 846 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 FAM47AQ5JRC9 791 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 RCSD1Q6JBY9 416 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 APOA5Q6Q788 366 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 TTC6Q86TZ1 520 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 AMOTL1Q8IY63 956 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 TMTC2Q8N394 836 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 ENAHQ8N8S7 591 aaPredicted RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 ANKS1AQ92625 1134 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 DPF2Q92785 391 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 ZSCAN10Q96SZ4 725 aaPredicted RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 LLPHQ9BRT6 129 aaKnown RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 NCOA5Q9HCD5 579 aaKnown RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 IL17RBQ9NRM6 502 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 FAM217BQ9NTX9 383 aaPredicted RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 TCP11L1Q9NUJ3 509 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 ZNF70Q9UC06 446 aaPredicted RBP7.05□□□□□ -1.28
SDC4P-201ENST00000453285 SMC3Q9UQE7 1217 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 CNTNAP1P78357 1384 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 NID2Q14112 1375 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 ATRNL1Q5VV63 1379 aa7.05□□□□□ -1.28
SDC4P-201ENST00000453285 TNKSO95271 1327 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 WNT10BO00744 389 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 NMT2O60551 498 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 JAK2O60674 1132 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 BRD1O95696 1058 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms