RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 CCDC93Q567U6 631 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 MAGEB6Q8N7X4 407 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 PIGBQ92521 554 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 STRBPQ96SI9 672 aaKnown RBP13.22□□□□□ -0.29
TNXB-203ENST00000451343 TRMT112Q9UI30 125 aaKnown RBP13.22□□□□□ -0.29
TNXB-203ENST00000451343 SMIM22K7EJ46 135 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 PPP6R2O75170 966 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 CDKL5O76039 1030 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 ETF1P62495 437 aaKnown RBP13.22□□□□□ -0.29
TNXB-203ENST00000451343 FMR1Q06787 632 aaKnown RBP eCLIP13.22□□□□□ -0.29
TNXB-203ENST00000451343 NR5A1Q13285 461 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 VGLL2Q8N8G2 317 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 SLC12A7Q9Y666 1083 aa13.22□□□□□ -0.29
TNXB-203ENST00000451343 AKAP11Q9UKA4 1901 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 NRDCO43847 1150 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 TOB1P50616 345 aaPredicted RBP13.21□□□□□ -0.29
TNXB-203ENST00000451343 CLCN6P51797 869 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 TRIM65Q6PJ69 517 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 OLFM4Q6UX06 510 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 USP49Q70CQ1 688 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 VSTM4Q8IW00 320 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 TIGD1Q96MW7 591 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 SEC31BQ9NQW1 1179 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 TBC1D2BQ9UPU7 963 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 SH3BP1Q9Y3L3 701 aa13.21□□□□□ -0.29
TNXB-203ENST00000451343 TCRBV5S4A2TA0A5A2 114 aa13.21□□□□□ -0.3
TNXB-203ENST00000451343 GIGYF2Q6Y7W6 1299 aaKnown RBP13.21□□□□□ -0.3
TNXB-203ENST00000451343 NAPBQ9H115 298 aa13.21□□□□□ -0.3
TNXB-203ENST00000451343 MAP3K15Q6ZN16 1313 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 PDE8BO95263 885 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 ADKP55263 362 aaKnown RBP13.2□□□□□ -0.3
TNXB-203ENST00000451343 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
TNXB-203ENST00000451343 NKX1-1Q15270 411 aaPredicted RBP13.2□□□□□ -0.3
TNXB-203ENST00000451343 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 DIS3L2Q8IYB7 885 aaKnown RBP13.2□□□□□ -0.3
TNXB-203ENST00000451343 CARD6Q9BX69 1037 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 PLA2G12BQ9BX93 195 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 SERTAD1Q9UHV2 236 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 TNS2Q63HR2 1409 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 hCG_1642624A0A1W2PR95 340 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 POLR2DO15514 142 aaKnown RBP13.2□□□□□ -0.3
TNXB-203ENST00000451343 CUTAO60888 179 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 SSRP1Q08945 709 aaKnown RBP13.2□□□□□ -0.3
TNXB-203ENST00000451343 SEMA3FQ13275 785 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 IFNL3Q8IZI9 196 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 PCDHB6Q9Y5E3 794 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 MYH7P12883 1935 aa13.2□□□□□ -0.3
TNXB-203ENST00000451343 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
TNXB-203ENST00000451343 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 H2AFXP16104 143 aaPredicted RBP13.19□□□□□ -0.3
TNXB-203ENST00000451343 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 KRI1Q8N9T8 703 aaKnown RBP13.19□□□□□ -0.3
TNXB-203ENST00000451343 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 DESI2Q9BSY9 194 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 IQSEC3Q9UPP2 1182 aaPredicted RBP13.19□□□□□ -0.3
TNXB-203ENST00000451343 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 DDX60Q8IY21 1712 aaKnown RBP13.19□□□□□ -0.3
TNXB-203ENST00000451343 ERICH4A6NGS2 130 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 EXOC5O00471 708 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
TNXB-203ENST00000451343 CASP1P29466 404 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 GABPB1Q06547 395 aaPredicted RBP13.19□□□□□ -0.3
TNXB-203ENST00000451343 RASGRF1Q13972 1273 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 TERF2Q15554 542 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 TMEM139Q8IV31 216 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 NFE2L3Q9Y4A8 694 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 LOC102724159A0A0B4J2E5 919 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 CBFA2T2O43439 604 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 PWP2Q15269 919 aaKnown RBP13.19□□□□□ -0.3
TNXB-203ENST00000451343 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 BANK1Q8NDB2 785 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 TMEM87BQ96K49 555 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 WDR24Q96S15 920 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 NHSL1Q5SYE7 1610 aa13.19□□□□□ -0.3
TNXB-203ENST00000451343 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
TNXB-203ENST00000451343 TTF1Q15361 905 aaPredicted RBP13.18□□□□□ -0.3
TNXB-203ENST00000451343 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
TNXB-203ENST00000451343 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
TNXB-203ENST00000451343 MED15Q96RN5 788 aa13.18□□□□□ -0.3
TNXB-203ENST00000451343 SAMSN1Q9NSI8 373 aaKnown RBP13.18□□□□□ -0.3
TNXB-203ENST00000451343 ECM29Q5VYK3 1845 aa13.18□□□□□ -0.3
TNXB-203ENST00000451343 SLC20A2Q08357 652 aa13.18□□□□□ -0.3
TNXB-203ENST00000451343 POSTNQ15063 836 aa13.18□□□□□ -0.3
TNXB-203ENST00000451343 GEMIN8Q9NWZ8 242 aaKnown RBP13.18□□□□□ -0.3
TNXB-203ENST00000451343 PPP2R2CQ9Y2T4 447 aa13.18□□□□□ -0.3
TNXB-203ENST00000451343 TDO2P48775 406 aa13.17□□□□□ -0.3
TNXB-203ENST00000451343 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
TNXB-203ENST00000451343 MTF1Q14872 753 aa13.17□□□□□ -0.3
TNXB-203ENST00000451343 KARSQ15046 597 aaKnown RBP13.17□□□□□ -0.3
TNXB-203ENST00000451343 SGMS1Q86VZ5 419 aa13.17□□□□□ -0.3
TNXB-203ENST00000451343 SPATA5Q8NB90 893 aa13.17□□□□□ -0.3
TNXB-203ENST00000451343 UBXN4Q92575 508 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms