RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 CCT6AP40227 531 aaKnown RBP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 FOXO4P98177 505 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 RABL6Q3YEC7 729 aaPredicted RBP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 NCAPH2Q6IBW4 605 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 SLC26A6Q9BXS9 759 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 CABP4P57796 275 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 SCARF1Q14162 830 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 SAFBQ15424 915 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 NBPF14Q5TI25 921 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 ANKLE2Q86XL3 938 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 KRI1Q8N9T8 703 aaKnown RBP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 CAPZA3Q96KX2 299 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 MKRN1Q9UHC7 482 aaKnown RBP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 GUCA1BQ9UMX6 200 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 UBE2Q2LH0YL09 131 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 RNF40O75150 1001 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 CASP14P31944 242 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 CCDC148Q8NFR7 591 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 RIN2Q8WYP3 895 aaPredicted RBP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAK1-206ENST00000449246 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
TRAK1-206ENST00000449246 DNAJC21Q5F1R6 531 aaKnown RBP13.43□□□□□ -0.26
TRAK1-206ENST00000449246 LRRC31Q6UY01 552 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 NOA1Q8NC60 698 aaKnown RBP13.43□□□□□ -0.26
TRAK1-206ENST00000449246 FAM71BQ8TC56 605 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 AFAP1L1Q8TED9 768 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 NUP88Q99567 741 aaPredicted RBP13.43□□□□□ -0.26
TRAK1-206ENST00000449246 NAPGQ99747 312 aaPredicted RBP13.43□□□□□ -0.26
TRAK1-206ENST00000449246 CRACR2AQ9BSW2 395 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 ATG3Q9NT62 314 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 ENC1O14682 589 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 CDKL5O76039 1030 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 LIG3P49916 1009 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 CASP7P55210 303 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 SLC9C2Q5TAH2 1124 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 SLF1Q9BQI6 1058 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 SLIT1O75093 1534 aa13.43□□□□□ -0.26
TRAK1-206ENST00000449246 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 TBX2Q13207 712 aaPredicted RBP13.42□□□□□ -0.26
TRAK1-206ENST00000449246 RESP18Q5W5W9 173 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 SMYD4Q8IYR2 804 aaPredicted RBP13.42□□□□□ -0.26
TRAK1-206ENST00000449246 IFNL2Q8IZJ0 200 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 MLKLQ8NB16 471 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 CAGE1Q8TC20 777 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 PUS7LQ9H0K6 701 aaKnown RBP13.42□□□□□ -0.26
TRAK1-206ENST00000449246 LRRIQ3A6PVS8 624 aaPredicted RBP13.42□□□□□ -0.26
TRAK1-206ENST00000449246 PPP6R2O75170 966 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 ABL1P00519 1130 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 CASP1P29466 404 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 MNAT1P51948 309 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 GRIN1Q05586 938 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 INCENPQ9NQS7 918 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 PLEKHG2Q9H7P9 1386 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 BTBD18B2RXH4 712 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 STAMQ92783 540 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 CEP126Q9P2H0 1117 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 KCNJ14Q9UNX9 436 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 HPSEQ9Y251 543 aa13.42□□□□□ -0.26
TRAK1-206ENST00000449246 PALLDQ8WX93 1383 aa13.41□□□□□ -0.26
TRAK1-206ENST00000449246 GOLGA8AA7E2F4 631 aa13.41□□□□□ -0.26
TRAK1-206ENST00000449246 RRP12Q5JTH9 1297 aaKnown RBP13.41□□□□□ -0.26
TRAK1-206ENST00000449246 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
TRAK1-206ENST00000449246 HNRNPLLQ8WVV9 542 aaKnown RBP13.41□□□□□ -0.26
TRAK1-206ENST00000449246 TEX13AQ9BXU3 409 aaPredicted RBP13.41□□□□□ -0.26
TRAK1-206ENST00000449246 CHD2O14647 1828 aaKnown RBP13.41□□□□□ -0.26
TRAK1-206ENST00000449246 N4BP3O15049 544 aa13.41□□□□□ -0.26
TRAK1-206ENST00000449246 FOXP2O15409 715 aa13.41□□□□□ -0.26
TRAK1-206ENST00000449246 PLBD2Q8NHP8 589 aa13.41□□□□□ -0.26
TRAK1-206ENST00000449246 ENOX1Q8TC92 643 aaKnown RBP13.41□□□□□ -0.26
TRAK1-206ENST00000449246 VPS16Q9H269 839 aa13.41□□□□□ -0.26
TRAK1-206ENST00000449246 SENP2Q9HC62 589 aa13.41□□□□□ -0.26
TRAK1-206ENST00000449246 B4E1Z4 1266 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 ZBTB43O43298 467 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 ANGEL1Q9UNK9 670 aaKnown RBP13.4□□□□□ -0.26
TRAK1-206ENST00000449246 MYO1BO43795 1136 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 CDC25AP30304 524 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 ZAP70P43403 619 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 CCT5P48643 541 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 PTPAQ15257 358 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 IQUBQ8NA54 791 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 MYO6Q9UM54 1294 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 NCAPD2Q15021 1401 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 EYA2O00167 538 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 ANTXR2P58335 489 aa13.4□□□□□ -0.26
TRAK1-206ENST00000449246 TTC19Q6DKK2 380 aaPredicted RBP13.4□□□□□ -0.26
TRAK1-206ENST00000449246 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
TRAK1-206ENST00000449246 CWC25Q9NXE8 425 aaPredicted RBP13.4□□□□□ -0.26
TRAK1-206ENST00000449246 H0YHG0 523 aa13.39□□□□□ -0.27
TRAK1-206ENST00000449246 PPFIA4O75335 1185 aa13.39□□□□□ -0.27
TRAK1-206ENST00000449246 CORO7P57737 925 aa13.39□□□□□ -0.27
TRAK1-206ENST00000449246 NR1I3Q14994 352 aa13.39□□□□□ -0.27
TRAK1-206ENST00000449246 FKBP15Q5T1M5 1219 aa13.39□□□□□ -0.27
TRAK1-206ENST00000449246 GSPT2Q8IYD1 628 aaKnown RBP13.39□□□□□ -0.27
TRAK1-206ENST00000449246 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms