RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 ADD2P35612 726 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 RHBDL3P58872 404 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 SREBF2Q12772 1141 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 TCP10Q12799 353 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 NFIAQ12857 509 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 UBE3CQ15386 1083 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.04□□□□□ -0.64
RFX3-207ENST00000449190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.04□□□□□ -0.64
RFX3-207ENST00000449190 WNK4Q96J92 1243 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 CLMNQ96JQ2 1002 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 RPAP1Q9BWH6 1393 aaPredicted RBP11.03□□□□□ -0.64
RFX3-207ENST00000449190 SSC5DA1L4H1 1573 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 WDHD1O75717 1129 aaPredicted RBP11.03□□□□□ -0.64
RFX3-207ENST00000449190 SDSP20132 328 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 PPP4CP60510 307 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 SKAP1Q86WV1 359 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 ZFPM1Q8IX07 1006 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 TNS4Q8IZW8 715 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 APPBP2Q92624 585 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 ZNF341Q9BYN7 854 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 AATFQ9NY61 560 aaKnown RBP eCLIP11.03□□□□□ -0.64
RFX3-207ENST00000449190 ZNF112Q9UJU3 913 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 CSADQ9Y600 493 aa11.03□□□□□ -0.64
RFX3-207ENST00000449190 CEP350Q5VT06 3117 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 ALDH1A1P00352 501 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 GSPT1P15170 499 aaKnown RBP11.02□□□□□ -0.65
RFX3-207ENST00000449190 MFAP1P55081 439 aaKnown RBP11.02□□□□□ -0.65
RFX3-207ENST00000449190 MAP3K10Q02779 954 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
RFX3-207ENST00000449190 BMP2KLQ5H9B9 411 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 IFFO2Q5TF58 517 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 MIGA2Q7L4E1 593 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 TEX11Q8IYF3 940 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 MIGA1Q8NAN2 632 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 RUFY2Q8WXA3 655 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 DDRGK1Q96HY6 314 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 CRNKL1Q9BZJ0 848 aaKnown RBP11.02□□□□□ -0.65
RFX3-207ENST00000449190 ELP3Q9H9T3 547 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.02□□□□□ -0.65
RFX3-207ENST00000449190 TSKSQ9UJT2 592 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 ECM29Q5VYK3 1845 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 THSD7BQ9C0I4 1608 aa11.02□□□□□ -0.65
RFX3-207ENST00000449190 TCRBV5S4A2TA0A5A2 114 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 TESPA1A2RU30 521 aaPredicted RBP11.01□□□□□ -0.65
RFX3-207ENST00000449190 TBC1D12O60347 775 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 GJA5P36382 358 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 USP5P45974 858 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 DYNLL1P63167 89 aaKnown RBP11.01□□□□□ -0.65
RFX3-207ENST00000449190 VGLL4Q14135 290 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 OTUD7BQ6GQQ9 843 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 ERO1BQ86YB8 467 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 ZSCAN29Q8IWY8 852 aaPredicted RBP11.01□□□□□ -0.65
RFX3-207ENST00000449190 OPTNQ96CV9 577 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 WRNIP1Q96S55 665 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 CFHR5Q9BXR6 569 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 DDX4Q9NQI0 724 aaKnown RBP11.01□□□□□ -0.65
RFX3-207ENST00000449190 HELLSQ9NRZ9 838 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 RFX7Q2KHR2 1363 aa11.01□□□□□ -0.65
RFX3-207ENST00000449190 DDTLA6NHG4 134 aaPredicted RBP11□□□□□ -0.65
RFX3-207ENST00000449190 SPDYE5A6NIY4 337 aa11□□□□□ -0.65
RFX3-207ENST00000449190 MBD4O95243 580 aa11□□□□□ -0.65
RFX3-207ENST00000449190 GNAT2P19087 354 aa11□□□□□ -0.65
RFX3-207ENST00000449190 TIE1P35590 1138 aa11□□□□□ -0.65
RFX3-207ENST00000449190 GTF2A2P52657 109 aa11□□□□□ -0.65
RFX3-207ENST00000449190 PPATQ06203 517 aa11□□□□□ -0.65
RFX3-207ENST00000449190 PICALMQ13492 652 aa11□□□□□ -0.65
RFX3-207ENST00000449190 MCMDC2Q4G0Z9 681 aa11□□□□□ -0.65
RFX3-207ENST00000449190 NOM1Q5C9Z4 860 aaKnown RBP11□□□□□ -0.65
RFX3-207ENST00000449190 ZMYM1Q5SVZ6 1142 aa11□□□□□ -0.65
RFX3-207ENST00000449190 SH3BP5LQ7L8J4 393 aa11□□□□□ -0.65
RFX3-207ENST00000449190 IFNL1Q8IU54 200 aa11□□□□□ -0.65
RFX3-207ENST00000449190 SH3RF3Q8TEJ3 882 aaPredicted RBP11□□□□□ -0.65
RFX3-207ENST00000449190 ZKSCAN4Q969J2 545 aaPredicted RBP11□□□□□ -0.65
RFX3-207ENST00000449190 ARMT1Q9H993 441 aa11□□□□□ -0.65
RFX3-207ENST00000449190 SNCAIPQ9Y6H5 919 aa11□□□□□ -0.65
RFX3-207ENST00000449190 PHF20L1A8MW92 1017 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 TBC1D8O95759 1140 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 APPP05067 770 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 INPP5BP32019 993 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 NMIQ13287 307 aaPredicted RBP10.99□□□□□ -0.65
RFX3-207ENST00000449190 NOL9Q5SY16 702 aaKnown RBP10.99□□□□□ -0.65
RFX3-207ENST00000449190 CWC27Q6UX04 472 aaKnown RBP10.99□□□□□ -0.65
RFX3-207ENST00000449190 ADGRA1Q86SQ6 560 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 AMOTL1Q8IY63 956 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 TGFBRAP1Q8WUH2 860 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 OSBP2Q969R2 916 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 NACAP1Q9BZK3 213 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 PUS7LQ9H0K6 701 aaKnown RBP10.99□□□□□ -0.65
RFX3-207ENST00000449190 DHX36Q9H2U1 1008 aaKnown RBP10.99□□□□□ -0.65
RFX3-207ENST00000449190 COLQQ9Y215 455 aaPredicted RBP10.99□□□□□ -0.65
RFX3-207ENST00000449190 SLC4A4Q9Y6R1 1079 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 MYH13Q9UKX3 1938 aa10.99□□□□□ -0.65
RFX3-207ENST00000449190 GPAA1O43292 621 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 CTNND1O60716 968 aaKnown RBP10.98□□□□□ -0.65
RFX3-207ENST00000449190 CDC45O75419 566 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 CETPP11597 493 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms