RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 JAG1P78504 1218 aa17.09■□□□□ 0.33
RTFDC1-204ENST00000449062 CAP1Q01518 475 aa17.09■□□□□ 0.33
RTFDC1-204ENST00000449062 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
RTFDC1-204ENST00000449062 DNAJC18Q9H819 358 aa17.09■□□□□ 0.33
RTFDC1-204ENST00000449062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
RTFDC1-204ENST00000449062 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
RTFDC1-204ENST00000449062 HERC5Q9UII4 1024 aaKnown RBP17.09■□□□□ 0.33
RTFDC1-204ENST00000449062 ZNF532Q9HCE3 1301 aa17.08■□□□□ 0.32
RTFDC1-204ENST00000449062 CAP2P40123 477 aa17.08■□□□□ 0.32
RTFDC1-204ENST00000449062 HDAC1Q13547 482 aaPredicted RBP17.08■□□□□ 0.32
RTFDC1-204ENST00000449062 SLFNL1Q499Z3 407 aa17.08■□□□□ 0.32
RTFDC1-204ENST00000449062 GPAT2Q6NUI2 795 aa17.08■□□□□ 0.32
RTFDC1-204ENST00000449062 CHGBP05060 677 aa17.07■□□□□ 0.32
RTFDC1-204ENST00000449062 ADD2P35612 726 aa17.07■□□□□ 0.32
RTFDC1-204ENST00000449062 AAMPQ13685 434 aa17.07■□□□□ 0.32
RTFDC1-204ENST00000449062 ANKRD23Q86SG2 305 aa17.07■□□□□ 0.32
RTFDC1-204ENST00000449062 PICK1Q9NRD5 415 aa17.07■□□□□ 0.32
RTFDC1-204ENST00000449062 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.07■□□□□ 0.32
RTFDC1-204ENST00000449062 DOCK2Q92608 1830 aa17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 A0A0G2JLL6 359 aaPredicted RBP17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 MAGEB6P1A0A0J9YX57 407 aa17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 CAPN15O75808 1086 aa17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 TAF1CQ15572 869 aaPredicted RBP17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 PRRT2Q7Z6L0 340 aaPredicted RBP17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 CCDC84Q86UT8 332 aaPredicted RBP17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 OTUD7AQ8TE49 926 aaPredicted RBP17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 ZFYVE28Q9HCC9 887 aa17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
RTFDC1-204ENST00000449062 MAST2Q6P0Q8 1798 aa17.05■□□□□ 0.32
RTFDC1-204ENST00000449062 TLR2O60603 784 aa17.05■□□□□ 0.32
RTFDC1-204ENST00000449062 UBE3CQ15386 1083 aa17.05■□□□□ 0.32
RTFDC1-204ENST00000449062 SALL3Q9BXA9 1300 aa17.04■□□□□ 0.32
RTFDC1-204ENST00000449062 SP3Q02447 781 aa17.04■□□□□ 0.32
RTFDC1-204ENST00000449062 PKN2Q16513 984 aaKnown RBP17.04■□□□□ 0.32
RTFDC1-204ENST00000449062 TSHZ3Q63HK5 1081 aa17.04■□□□□ 0.32
RTFDC1-204ENST00000449062 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
RTFDC1-204ENST00000449062 C17orf99Q6UX52 265 aa17.04■□□□□ 0.32
RTFDC1-204ENST00000449062 LCORLQ8N3X6 602 aa17.04■□□□□ 0.32
RTFDC1-204ENST00000449062 EHD4Q9H223 541 aa17.04■□□□□ 0.32
RTFDC1-204ENST00000449062 SIPA1L1O43166 1804 aa17.03■□□□□ 0.32
RTFDC1-204ENST00000449062 ADGRA2Q96PE1 1338 aa17.03■□□□□ 0.32
RTFDC1-204ENST00000449062 PDHXO00330 501 aa17.03■□□□□ 0.32
RTFDC1-204ENST00000449062 USP5P45974 858 aa17.03■□□□□ 0.32
RTFDC1-204ENST00000449062 PLCD1P51178 756 aa17.03■□□□□ 0.32
RTFDC1-204ENST00000449062 SHROOM1Q2M3G4 852 aaPredicted RBP17.03■□□□□ 0.32
RTFDC1-204ENST00000449062 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
RTFDC1-204ENST00000449062 PI4K2BQ8TCG2 481 aa17.03■□□□□ 0.32
RTFDC1-204ENST00000449062 DCP1AQ9NPI6 582 aaPredicted RBP17.03■□□□□ 0.32
RTFDC1-204ENST00000449062 CDK5RAP2Q96SN8 1893 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 PRKAB2O43741 272 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 EVX2Q03828 476 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 GABPAQ06546 454 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 SPP2Q13103 211 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 FASTKD5Q7L8L6 764 aaKnown RBP17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 OTOP1Q7RTM1 612 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 KBTBD3Q8NAB2 608 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 WDR18Q9BV38 432 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 CRNKL1Q9BZJ0 848 aaKnown RBP17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 ARMT1Q9H993 441 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 GINM1Q9NU53 330 aa17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.32
RTFDC1-204ENST00000449062 TTC41PQ6P2S7 1318 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 TRIM75PA6NK02 468 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 USP17L5A8MUK1 530 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 HLA-DOAP06340 250 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 ZNF280CQ8ND82 737 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 CD99L2Q8TCZ2 262 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 GCC1Q96CN9 775 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 ERO1AQ96HE7 468 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 STAP2Q9UGK3 403 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 SERPINB13Q9UIV8 391 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 SLC45A1Q9Y2W3 748 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 HTTP42858 3142 aa17.01■□□□□ 0.31
RTFDC1-204ENST00000449062 FOCADQ5VW36 1801 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 MBD4O95243 580 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 IGHDP01880 384 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 ASNSP08243 561 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 ANKRD45Q5TZF3 282 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 FBXO46Q6PJ61 603 aaPredicted RBP17■□□□□ 0.31
RTFDC1-204ENST00000449062 SMC5Q8IY18 1101 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 SDR42E1Q8WUS8 393 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 TBC1D2Q9BYX2 928 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 HPS5Q9UPZ3 1129 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 PHIPQ8WWQ0 1821 aa17■□□□□ 0.31
RTFDC1-204ENST00000449062 CCDC85CA6NKD9 419 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 CYP2C8P10632 490 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 BCRP11274 1271 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 SHMT1P34896 483 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 RGS19P49795 217 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 ZSCAN25Q6NSZ9 544 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 CRACR2BQ8N4Y2 399 aaPredicted RBP16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 OSBP2Q969R2 916 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 GPATCH3Q96I76 525 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 ATP8A2Q9NTI2 1148 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms