RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	STK11IP	Q8N1F8	1099 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	KRI1	Q8N9T8	703 aa	Known RBP	19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	CDC5L	Q99459	802 aa	Known RBP	19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	CCDC94	Q9BW85	323 aa	Predicted RBP	19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	FOXP1	Q9H334	677 aa	Predicted RBP	19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	TOMM22	Q9NS69	142 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	TAOK2	Q9UL54	1235 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	KCNH3	Q9ULD8	1083 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	CCDC196	A0A1B0GTZ2	297 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	ERICH2	A1L162	156 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	DEXI	O95424	95 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	PNOC	Q13519	176 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	SAFB	Q15424	915 aa	Known RBP eCLIP	19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	LONRF3	Q496Y0	759 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	KRBA2	Q6ZNG9	492 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	CCAR2	Q8N163	923 aa	Known RBP	19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	CCDC150	Q8NCX0	1101 aa		19.51	■□□□□ 0.71
TOM1-210	ENST00000449058	SCN7A	Q01118	1682 aa		19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	ZNF831	Q5JPB2	1677 aa		19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	COL1A1	P02452	1464 aa	Predicted RBP	19.5	■□□□□ 0.71
TOM1-210	ENST00000449058		A0A0G2JS52	829 aa		19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	DHX8	Q14562	1220 aa	Known RBP	19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	ISM2	Q6H9L7	571 aa		19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	ARMCX5	Q6P1M9	558 aa		19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	TMC6	Q7Z403	805 aa		19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	ZNF654	Q8IZM8	581 aa		19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	FANCB	Q8NB91	859 aa		19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	KCNJ14	Q9UNX9	436 aa		19.5	■□□□□ 0.71
TOM1-210	ENST00000449058	FANCC	Q00597	558 aa		19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	SEC23A	Q15436	765 aa		19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	RILPL1	Q5EBL4	403 aa		19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	ZNF652	Q9Y2D9	606 aa		19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	TAF1	P21675	1872 aa		19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	LMOD1	P29536	600 aa	Predicted RBP	19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	MDM2	Q00987	491 aa	Predicted RBP	19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	MYL5	Q02045	173 aa		19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	PTPN14	Q15678	1187 aa		19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	FOXP4	Q8IVH2	680 aa	Predicted RBP	19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	CCDC112	Q8NEF3	446 aa		19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	FBXO2	Q9UK22	296 aa	Predicted RBP	19.49	■□□□□ 0.71
TOM1-210	ENST00000449058	DUOX1	Q9NRD9	1551 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	MAGEB6P1	A0A0J9YX57	407 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	PTPRE	P23469	700 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	CLEC4G	Q6UXB4	293 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	CNNM3	Q8NE01	707 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	RIOK1	Q9BRS2	568 aa	Known RBP	19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	UBAC1	Q9BSL1	405 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	MYH2	Q9UKX2	1941 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	DLEC1	Q9Y238	1755 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	KCNJ6	P48051	423 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	UBE4A	Q14139	1066 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	SDR42E1	Q8WUS8	393 aa		19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	GNL3L	Q9NVN8	582 aa	Known RBP	19.48	■□□□□ 0.71
TOM1-210	ENST00000449058	MYO1B	O43795	1136 aa		19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	ATP1A3	P13637	1013 aa		19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	GYG1	P46976	350 aa		19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	NCBP1	Q09161	790 aa	Known RBP	19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	PPP2R5B	Q15173	497 aa		19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	SF3B3	Q15393	1217 aa	Known RBP	19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	ESR2	Q92731	530 aa		19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	PCDHA5	Q9Y5H7	936 aa		19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	BAZ2A	Q9UIF9	1905 aa	Known RBP	19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	ANKRD18A	Q8IVF6	992 aa		19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	CMTR1	Q8N1G2	835 aa	Known RBP	19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	ZNF579	Q8NAF0	562 aa	Known RBP	19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	RAI14	Q9P0K7	980 aa		19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	ABCF2	Q9UG63	623 aa		19.47	■□□□□ 0.71
TOM1-210	ENST00000449058	TNKS	O95271	1327 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	MINDY4B	A8MYZ0	360 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	C3orf67	Q6ZVT6	689 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	CCDC82	Q8N4S0	544 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	SMARCC1	Q92922	1105 aa	Predicted RBP	19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	RNF26	Q9BY78	433 aa	Predicted RBP	19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	BSDC1	Q9NW68	430 aa	Predicted RBP	19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	TRMT1	Q9NXH9	659 aa	Known RBP	19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	SPATA31A5	Q5VU36	1347 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	SPATA31A7	Q8IWB4	1347 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	ADAMTS2	O95450	1211 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	SFPQ	P23246	707 aa	Known RBP eCLIP	19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	GRIN1	Q05586	938 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	NR5A1	Q13285	461 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	ERFE	Q4G0M1	354 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	E4F1	Q66K89	784 aa	Predicted RBP	19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	PDCL2	Q8N4E4	241 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	NUP133	Q8WUM0	1156 aa		19.46	■□□□□ 0.71
TOM1-210	ENST00000449058	WTIP	A6NIX2	430 aa	Predicted RBP	19.45	■□□□□ 0.7
TOM1-210	ENST00000449058	BMP6	P22004	513 aa		19.45	■□□□□ 0.7
TOM1-210	ENST00000449058	OLFM4	Q6UX06	510 aa		19.45	■□□□□ 0.7
TOM1-210	ENST00000449058	BRIP1	Q9BX63	1249 aa		19.45	■□□□□ 0.7
TOM1-210	ENST00000449058	PODXL2	Q9NZ53	605 aa		19.45	■□□□□ 0.7
TOM1-210	ENST00000449058	PCDHB6	Q9Y5E3	794 aa		19.45	■□□□□ 0.7
TOM1-210	ENST00000449058	KIF2A	O00139	706 aa	Predicted RBP	19.44	■□□□□ 0.7
TOM1-210	ENST00000449058	SPECC1	Q5M775	1068 aa		19.44	■□□□□ 0.7
TOM1-210	ENST00000449058	OXER1	Q8TDS5	423 aa		19.44	■□□□□ 0.7
TOM1-210	ENST00000449058	ZNF592	Q92610	1267 aa		19.44	■□□□□ 0.7
TOM1-210	ENST00000449058	HOOK1	Q9UJC3	728 aa	Known RBP	19.44	■□□□□ 0.7
TOM1-210	ENST00000449058	MORC2	Q9Y6X9	1032 aa	Predicted RBP	19.44	■□□□□ 0.7
TOM1-210	ENST00000449058	PSD	A5PKW4	1024 aa	Predicted RBP	19.44	■□□□□ 0.7
TOM1-210	ENST00000449058	SMIM22	K7EJ46	135 aa		19.44	■□□□□ 0.7

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