RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 BRPF3Q9ULD4 1205 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 BAZ2AQ9UIF9 1905 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 CCDC69A6NI79 296 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 ZBTB43O43298 467 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 CTDNEP1O95476 244 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 SBK1Q52WX2 424 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 ZNF384Q8TF68 577 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 CAMKK2Q96RR4 588 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 UBAC1Q9BSL1 405 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 SCAND2PQ9GZW5 306 aaPredicted RBP12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 COA1Q9GZY4 146 aa12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
VIPAS39-203ENST00000448935 PLCG2P16885 1265 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 BAG6P46379 1132 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 PPP4CP60510 307 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 UBE2HP62256 183 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 WTAPQ15007 396 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 PPP2R5BQ15173 497 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 ATL3Q6DD88 541 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 STYK1Q6J9G0 422 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 APOA5Q6Q788 366 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 MPNDQ8N594 471 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 EYA3Q99504 573 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 ZC3H12CQ9C0D7 883 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 LY9Q9HBG7 655 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 POLLQ9UGP5 575 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 HPS5Q9UPZ3 1129 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 SLC12A7Q9Y666 1083 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 MYH2Q9UKX2 1941 aa12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 COL11A2P13942 1736 aaPredicted RBP12.35□□□□□ -0.43
VIPAS39-203ENST00000448935 ELP1O95163 1332 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 FAM205AQ6ZU69 1335 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 MYH15Q9Y2K3 1946 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 H0YIN7 160 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 DPYSL4O14531 572 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 FGRP09769 529 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 CTR9Q6PD62 1173 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 DPP8Q6V1X1 898 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 IQCA1Q86XH1 822 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 GPT2Q8TD30 523 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 DCP1AQ9NPI6 582 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 CFAP45Q9UL16 551 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 NID2Q14112 1375 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 EP400Q96L91 3159 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 MROH7-TTC4A0A0A0MT08 1334 aa12.34□□□□□ -0.43
VIPAS39-203ENST00000448935 FSD2A1L4K1 749 aa12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 SPDYE16A6NNV3 312 aaPredicted RBP12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 FIBPO43427 364 aa12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 ORC4O43929 436 aa12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 USP5P45974 858 aa12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 MRE11P49959 708 aa12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 ZNF445P59923 1031 aa12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 EN1Q05925 392 aaPredicted RBP12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 PDE4BQ07343 736 aa12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 EZH2Q15910 746 aaKnown RBP12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 ORC3Q9UBD5 711 aaPredicted RBP12.33□□□□□ -0.43
VIPAS39-203ENST00000448935 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
VIPAS39-203ENST00000448935 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
VIPAS39-203ENST00000448935 USP17L21D6R901 530 aa12.33□□□□□ -0.44
VIPAS39-203ENST00000448935 RESTQ13127 1097 aa12.33□□□□□ -0.44
VIPAS39-203ENST00000448935 FERMT3Q86UX7 667 aa12.33□□□□□ -0.44
VIPAS39-203ENST00000448935 C2CD5Q86YS7 1000 aa12.33□□□□□ -0.44
VIPAS39-203ENST00000448935 WASF1Q92558 559 aa12.33□□□□□ -0.44
VIPAS39-203ENST00000448935 CNKSR1Q969H4 720 aa12.33□□□□□ -0.44
VIPAS39-203ENST00000448935 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
VIPAS39-203ENST00000448935 DLEC1Q9Y238 1755 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 NAV1Q8NEY1 1877 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 G3V3G9 751 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 LETM1O95202 739 aaPredicted RBP12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 ZSCAN23Q3MJ62 389 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 MFSD14BQ5SR56 506 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 MICU3Q86XE3 530 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 CHAMP1Q96JM3 812 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 C8orf76Q96K31 380 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 GPR101Q96P66 508 aaPredicted RBP12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 PHF12Q96QT6 1004 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 ZNF287Q9HBT7 754 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 GDPD2Q9HCC8 539 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 JAG2Q9Y219 1238 aa12.32□□□□□ -0.44
VIPAS39-203ENST00000448935 STK36Q9NRP7 1315 aa12.31□□□□□ -0.44
VIPAS39-203ENST00000448935 GPR75-ASB3A0A0A6YYF3 556 aa12.31□□□□□ -0.44
VIPAS39-203ENST00000448935 CALM1P0DP23 149 aa12.31□□□□□ -0.44
VIPAS39-203ENST00000448935 CALM2P0DP24 149 aa12.31□□□□□ -0.44
VIPAS39-203ENST00000448935 CALM3P0DP25 149 aa12.31□□□□□ -0.44
VIPAS39-203ENST00000448935 IARSP41252 1262 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms