RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ZSWIM8A7E2V4 1837 aa16.82■□□□□ 0.28
PDLIM2-213ENST00000448520 CEP290O15078 2479 aa16.81■□□□□ 0.28
PDLIM2-213ENST00000448520 IGSF3O75054 1194 aa16.81■□□□□ 0.28
PDLIM2-213ENST00000448520 GJB1P08034 283 aa16.81■□□□□ 0.28
PDLIM2-213ENST00000448520 CAPN2P17655 700 aa16.81■□□□□ 0.28
PDLIM2-213ENST00000448520 SLAIN1Q8ND83 568 aa16.81■□□□□ 0.28
PDLIM2-213ENST00000448520 ZNF384Q8TF68 577 aa16.81■□□□□ 0.28
PDLIM2-213ENST00000448520 GPR108Q9NPR9 543 aa16.81■□□□□ 0.28
PDLIM2-213ENST00000448520 LRP2BPQ9P2M1 347 aa16.81■□□□□ 0.28
PDLIM2-213ENST00000448520 GTF3C3Q9Y5Q9 886 aa16.81■□□□□ 0.28
PDLIM2-213ENST00000448520 GJA8P48165 433 aa16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 PRKCZQ05513 592 aa16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 TBC1D9Q6ZT07 1266 aa16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 SMCR8Q8TEV9 937 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 NOL10Q9BSC4 688 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 PNMA3Q9UL41 463 aa16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 AGTPBP1Q9UPW5 1226 aa16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 DOCK3Q8IZD9 2030 aa16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 MGAMO43451 1857 aa16.8■□□□□ 0.28
PDLIM2-213ENST00000448520 TRIM75PA6NK02 468 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 BAG3O95817 575 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 IGHDP01880 384 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 CCL5P13501 91 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 PLCG2P16885 1265 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 MCAMP43121 646 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 POLA2Q14181 598 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 CCDC158Q5M9N0 1113 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 PXYLP1Q8TE99 480 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 RNF208Q9H0X6 261 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 PI4KBQ9UBF8 816 aa16.79■□□□□ 0.28
PDLIM2-213ENST00000448520 PTPRFP10586 1907 aa16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 PABPC4Q13310 644 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 IRF5Q13568 498 aa16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 B4GALNT3Q6L9W6 998 aa16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 PI16Q6UXB8 463 aa16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 RPAP2Q8IXW5 612 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 TEX11Q8IYF3 940 aa16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 ZNF280CQ8ND82 737 aa16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 SSH3Q8TE77 659 aa16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 DHX36Q9H2U1 1008 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 HERC5Q9UII4 1024 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 GABRQQ9UN88 632 aa16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 COL2A1P02458 1487 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 DOCK1Q14185 1865 aa16.78■□□□□ 0.28
PDLIM2-213ENST00000448520 USP17L5A8MUK1 530 aa16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 TNPO2O14787 897 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 ADCY3O60266 1144 aa16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 SLURP2P0DP57 97 aa16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 CAP2P40123 477 aa16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 FLT3LGP49771 235 aa16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 PPP4CP60510 307 aa16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 SPP2Q13103 211 aa16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 AAMPQ13685 434 aa16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 COA7Q96BR5 231 aa16.77■□□□□ 0.28
PDLIM2-213ENST00000448520 PHIPQ8WWQ0 1821 aa16.77■□□□□ 0.27
PDLIM2-213ENST00000448520 GCLCP48506 637 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 OS9Q13438 667 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 TNNI3KQ59H18 835 aa16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 TTC39AQ5SRH9 613 aa16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 NAA16Q6N069 864 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 FOXP4Q8IVH2 680 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 DPF3Q92784 378 aa16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 SHISA4Q96DD7 197 aa16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 ZNF512BQ96KM6 892 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 HTATIP2Q9BUP3 242 aa16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 AS3MTQ9HBK9 375 aa16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 FPGT-TNNI3KV9GXZ4 949 aa16.76■□□□□ 0.27
PDLIM2-213ENST00000448520 H0YGN5 161 aa16.75■□□□□ 0.27
PDLIM2-213ENST00000448520 SGPL1O95470 568 aa16.75■□□□□ 0.27
PDLIM2-213ENST00000448520 FAM110CQ1W6H9 321 aa16.75■□□□□ 0.27
PDLIM2-213ENST00000448520 SH3D19Q5HYK7 790 aa16.75■□□□□ 0.27
PDLIM2-213ENST00000448520 ANKRD13CQ8N6S4 541 aa16.75■□□□□ 0.27
PDLIM2-213ENST00000448520 COLQQ9Y215 455 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-213ENST00000448520 EXOC6BQ9Y2D4 811 aa16.75■□□□□ 0.27
PDLIM2-213ENST00000448520 FAM196BA6NMK8 535 aa16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 SURF6O75683 361 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 TREML2Q5T2D2 321 aa16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 UBE2Q1Q7Z7E8 422 aa16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 CCDC84Q86UT8 332 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 SH3RF3Q8TEJ3 882 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 U2AF1L4Q8WU68 220 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 GINM1Q9NU53 330 aa16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 PPP4R2Q9NY27 417 aa16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 AATFQ9NY61 560 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 NOP58Q9Y2X3 529 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-213ENST00000448520 APBB1O00213 710 aa16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 HMMRO75330 724 aa16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 ASNSP08243 561 aa16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 HDAC1Q13547 482 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 ERICH6BQ5W0A0 696 aa16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 METTL16Q86W50 562 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 TGFBRAP1Q8WUH2 860 aa16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 DBNDD2Q9BQY9 259 aa16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 WDR18Q9BV38 432 aa16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 UNC93B1Q9H1C4 597 aa16.73■□□□□ 0.27
PDLIM2-213ENST00000448520 SNRKQ9NRH2 765 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 316.7 ms