RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 SIPA1L1O43166 1804 aa34.73■■■■□ 3.15
CBX4-202ENST00000448310 MTFR1Q15390 333 aa34.72■■■■□ 3.15
CBX4-202ENST00000448310 NAA16Q6N069 864 aaPredicted RBP34.72■■■■□ 3.15
CBX4-202ENST00000448310 AATFQ9NY61 560 aaKnown RBP eCLIP34.72■■■■□ 3.158e-7■■□□□ 12.5
CBX4-202ENST00000448310 ZBTB7BO15156 539 aaPredicted RBP34.71■■■■□ 3.15
CBX4-202ENST00000448310 NOL10Q9BSC4 688 aaKnown RBP34.71■■■■□ 3.15
CBX4-202ENST00000448310 CYP2E1P05181 493 aaPredicted RBP34.7■■■■□ 3.15
CBX4-202ENST00000448310 FCGRTP55899 365 aa34.7■■■■□ 3.15
CBX4-202ENST00000448310 PRKCZQ05513 592 aa34.7■■■■□ 3.15
CBX4-202ENST00000448310 RRP1BQ14684 758 aaKnown RBP34.7■■■■□ 3.15
CBX4-202ENST00000448310 SLC45A1Q9Y2W3 748 aa34.7■■■■□ 3.15
CBX4-202ENST00000448310 FOCADQ5VW36 1801 aa34.69■■■■□ 3.14
CBX4-202ENST00000448310 GRK4P32298 578 aa34.69■■■■□ 3.14
CBX4-202ENST00000448310 DIEXFQ68CQ4 756 aaKnown RBP34.69■■■■□ 3.14
CBX4-202ENST00000448310 ADGRA1Q86SQ6 560 aa34.69■■■■□ 3.14
CBX4-202ENST00000448310 TLR7Q9NYK1 1049 aaKnown RBP34.69■■■■□ 3.14
CBX4-202ENST00000448310 NOP58Q9Y2X3 529 aaKnown RBP34.69■■■■□ 3.14
CBX4-202ENST00000448310 LOC285556D6RIA3 1793 aa34.68■■■■□ 3.14
CBX4-202ENST00000448310 TREML2Q5T2D2 321 aa34.68■■■■□ 3.14
CBX4-202ENST00000448310 DBNLQ9UJU6 430 aaKnown RBP34.68■■■■□ 3.14
CBX4-202ENST00000448310 GABRQQ9UN88 632 aa34.68■■■■□ 3.14
CBX4-202ENST00000448310 ZAP70P43403 619 aa34.67■■■■□ 3.14
CBX4-202ENST00000448310 SMCR8Q8TEV9 937 aaPredicted RBP34.67■■■■□ 3.14
CBX4-202ENST00000448310 CCDC8Q9H0W5 538 aaPredicted RBP34.67■■■■□ 3.14
CBX4-202ENST00000448310 AGTPBP1Q9UPW5 1226 aa34.67■■■■□ 3.14
CBX4-202ENST00000448310 BAG3O95817 575 aa34.66■■■■□ 3.14
CBX4-202ENST00000448310 CAP2P40123 477 aa34.66■■■■□ 3.14
CBX4-202ENST00000448310 SPP2Q13103 211 aa34.66■■■■□ 3.14
CBX4-202ENST00000448310 PIH1D3Q9NQM4 214 aaKnown RBP34.66■■■■□ 3.14
CBX4-202ENST00000448310 DOCK3Q8IZD9 2030 aa34.65■■■■□ 3.14
CBX4-202ENST00000448310 MAPKAPK5Q8IW41 473 aa34.65■■■■□ 3.14
CBX4-202ENST00000448310 TGFBRAP1Q8WUH2 860 aa34.65■■■■□ 3.14
CBX4-202ENST00000448310 ZNF512BQ96KM6 892 aaPredicted RBP34.65■■■■□ 3.14
CBX4-202ENST00000448310 ZNF280CQ8ND82 737 aa34.64■■■■□ 3.14
CBX4-202ENST00000448310 EAF2Q96CJ1 260 aaPredicted RBP34.64■■■■□ 3.14
CBX4-202ENST00000448310 PPP4CP60510 307 aa34.63■■■■□ 3.13
CBX4-202ENST00000448310 SHISA4Q96DD7 197 aa34.63■■■■□ 3.13
CBX4-202ENST00000448310 PI4KBQ9UBF8 816 aa34.63■■■■□ 3.13
CBX4-202ENST00000448310 BIN2Q9UBW5 565 aaPredicted RBP34.63■■■■□ 3.13
CBX4-202ENST00000448310 HERC5Q9UII4 1024 aaKnown RBP34.63■■■■□ 3.13
CBX4-202ENST00000448310 PLCG2P16885 1265 aa34.62■■■■□ 3.13
CBX4-202ENST00000448310 HMGCS2P54868 508 aa34.62■■■■□ 3.13
CBX4-202ENST00000448310 CEP85Q6P2H3 762 aa34.62■■■■□ 3.13
CBX4-202ENST00000448310 ANKRD13CQ8N6S4 541 aa34.62■■■■□ 3.13
CBX4-202ENST00000448310 PANK1Q8TE04 598 aa34.62■■■■□ 3.13
CBX4-202ENST00000448310 GCC1Q96CN9 775 aa34.62■■■■□ 3.13
CBX4-202ENST00000448310 FLT1P17948 1338 aa34.61■■■■□ 3.13
CBX4-202ENST00000448310 PROCA1Q8NCQ7 364 aaPredicted RBP34.61■■■■□ 3.13
CBX4-202ENST00000448310 DHX36Q9H2U1 1008 aaKnown RBP34.61■■■■□ 3.13
CBX4-202ENST00000448310 ZBED9Q6R2W3 1325 aa34.6■■■■□ 3.13
CBX4-202ENST00000448310 USP17L5A8MUK1 530 aa34.6■■■■□ 3.13
CBX4-202ENST00000448310 CCL5P13501 91 aa34.6■■■■□ 3.13
CBX4-202ENST00000448310 NDUFB9Q9Y6M9 179 aa34.6■■■■□ 3.13
CBX4-202ENST00000448310 TNPO2O14787 897 aaKnown RBP34.59■■■■□ 3.13
CBX4-202ENST00000448310 FLT3LGP49771 235 aa34.59■■■■□ 3.13
CBX4-202ENST00000448310 DYNLL1P63167 89 aaKnown RBP34.59■■■■□ 3.13
CBX4-202ENST00000448310 DNAJC18Q9H819 358 aa34.59■■■■□ 3.13
CBX4-202ENST00000448310 PNMA3Q9UL41 463 aa34.59■■■■□ 3.13
CBX4-202ENST00000448310 PALD1Q9ULE6 856 aa34.59■■■■□ 3.13
CBX4-202ENST00000448310 EXOC6BQ9Y2D4 811 aa34.59■■■■□ 3.13
CBX4-202ENST00000448310 CEP290O15078 2479 aa34.59■■■■□ 3.13
CBX4-202ENST00000448310 MYH1P12882 1939 aa34.58■■■■□ 3.13
CBX4-202ENST00000448310 CYP7A1P22680 504 aa34.58■■■■□ 3.13
CBX4-202ENST00000448310 SLAIN1Q8ND83 568 aa34.58■■■■□ 3.13
CBX4-202ENST00000448310 TBC1D2Q9BYX2 928 aa34.58■■■■□ 3.13
CBX4-202ENST00000448310 SAP30BPQ9UHR5 308 aaKnown RBP34.58■■■■□ 3.13
CBX4-202ENST00000448310 ADCY3O60266 1144 aa34.57■■■■□ 3.12
CBX4-202ENST00000448310 UBXN2AP68543 259 aa34.57■■■■□ 3.12
CBX4-202ENST00000448310 JAG1P78504 1218 aa34.57■■■■□ 3.12
CBX4-202ENST00000448310 SHROOM1Q2M3G4 852 aaPredicted RBP34.57■■■■□ 3.12
CBX4-202ENST00000448310 RNF208Q9H0X6 261 aa34.57■■■■□ 3.12
CBX4-202ENST00000448310 IDH1O75874 414 aaKnown RBP34.56■■■■□ 3.12
CBX4-202ENST00000448310 ELNP15502 786 aa34.56■■■■□ 3.12
CBX4-202ENST00000448310 AS3MTQ9HBK9 375 aa34.56■■■■□ 3.12
CBX4-202ENST00000448310 HABP4Q5JVS0 413 aaKnown RBP34.55■■■■□ 3.12
CBX4-202ENST00000448310 CRACR2BQ8N4Y2 399 aaPredicted RBP34.55■■■■□ 3.12
CBX4-202ENST00000448310 GJB1P08034 283 aa34.54■■■■□ 3.12
CBX4-202ENST00000448310 FAM110CQ1W6H9 321 aa34.54■■■■□ 3.12
CBX4-202ENST00000448310 MIGA1Q8NAN2 632 aa34.54■■■■□ 3.12
CBX4-202ENST00000448310 TRIM34Q9BYJ4 488 aa34.54■■■■□ 3.12
CBX4-202ENST00000448310 UNC93B1Q9H1C4 597 aa34.54■■■■□ 3.12
CBX4-202ENST00000448310 ANTXR1Q9H6X2 564 aa34.54■■■■□ 3.12
CBX4-202ENST00000448310 GDF11O95390 407 aa34.53■■■■□ 3.12
CBX4-202ENST00000448310 GJA8P48165 433 aa34.53■■■■□ 3.12
CBX4-202ENST00000448310 MTMR2Q13614 643 aa34.53■■■■□ 3.12
CBX4-202ENST00000448310 SH3D19Q5HYK7 790 aa34.53■■■■□ 3.12
CBX4-202ENST00000448310 AACSQ86V21 672 aa34.53■■■■□ 3.12
CBX4-202ENST00000448310 FOXP4Q8IVH2 680 aaPredicted RBP34.53■■■■□ 3.12
CBX4-202ENST00000448310 NKX2-3Q8TAU0 364 aa34.53■■■■□ 3.12
CBX4-202ENST00000448310 ASCC2Q9H1I8 757 aaPredicted RBP34.53■■■■□ 3.12
CBX4-202ENST00000448310 TAOK2Q9UL54 1235 aa34.53■■■■□ 3.12
CBX4-202ENST00000448310 ASNSP08243 561 aa34.52■■■■□ 3.12
CBX4-202ENST00000448310 PABPC4Q13310 644 aaKnown RBP eCLIP34.52■■■■□ 3.12
CBX4-202ENST00000448310 METTL16Q86W50 562 aaKnown RBP34.52■■■■□ 3.12
CBX4-202ENST00000448310 MAGEB6Q8N7X4 407 aa34.52■■■■□ 3.12
CBX4-202ENST00000448310 WDR18Q9BV38 432 aa34.52■■■■□ 3.12
CBX4-202ENST00000448310 IGSF3O75054 1194 aa34.51■■■■□ 3.12
CBX4-202ENST00000448310 ERC1Q8IUD2 1116 aa34.51■■■■□ 3.12
CBX4-202ENST00000448310 COA7Q96BR5 231 aa34.51■■■■□ 3.12
CBX4-202ENST00000448310 INHAP05111 366 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms