RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ERCC6LQ2NKX8 1250 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 KRT40Q6A162 431 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 DPH6Q7L8W6 267 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 TTC16Q8NEE8 873 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 FAM212AQ96EL1 285 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 CCDC51Q96ER9 411 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 BABAM1Q9NWV8 329 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 RNF123Q5XPI4 1314 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 WDR7Q9Y4E6 1490 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 LDHBP07195 334 aaKnown RBP8.67□□□□□ -1.02
NEDD9-204ENST00000448183 ATP6V1AP38606 617 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 PPP2R5BQ15173 497 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 KBTBD3Q8NAB2 608 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 MCUR1Q96AQ8 359 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 WWC3Q9ULE0 1092 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 PLCH2O75038 1416 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 AKNAD1Q5T1N1 836 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 HAUS3Q68CZ6 603 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 TTC6Q86TZ1 520 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 KLHL7Q8IXQ5 586 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 ARHGAP24Q8N264 748 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 OGFOD1Q8N543 542 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 MIPOL1Q8TD10 442 aa8.67□□□□□ -1.02
NEDD9-204ENST00000448183 MAK16Q9BXY0 300 aaKnown RBP8.67□□□□□ -1.02
NEDD9-204ENST00000448183 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.67□□□□□ -1.02
NEDD9-204ENST00000448183 B4DLN1 442 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 STX10O60499 249 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 HOXB7P09629 217 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 HSPA1LP34931 641 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 PPM1FP49593 454 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 LONRF3Q496Y0 759 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 WDR44Q5JSH3 913 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 BEND3Q5T5X7 828 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 PLCD3Q8N3E9 789 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 TMEM87AQ8NBN3 555 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 LRRC59Q96AG4 307 aaKnown RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 DCAF5Q96JK2 942 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 NYXQ9GZU5 481 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 FAM184BQ9ULE4 1060 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 NPC1L1Q9UHC9 1359 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 GPAA1O43292 621 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 ARID4AP29374 1257 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 BIRC3Q13489 604 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 RPS6KA1Q15418 735 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 WHAMMP3Q1A5X7 153 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 KRT71Q3SY84 523 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.66□□□□□ -1.022e-7■□□□□ 8.1
NEDD9-204ENST00000448183 IQCDQ96DY2 449 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 FAM204AQ9H8W3 233 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 ASIC3Q9UHC3 531 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 SAR1BQ9Y6B6 198 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 FLOT1O75955 427 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 KRT5P13647 590 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 CCDC38Q502W7 563 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 GKAP1Q5VSY0 366 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 RPUSD2Q8IZ73 545 aaKnown RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 FNBP1Q96RU3 617 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 ANKRD2Q9GZV1 360 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 EIF2AK4Q9P2K8 1649 aaKnown RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 CALUO43852 315 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 JAK2O60674 1132 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 GMNNO75496 209 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 ETF1P62495 437 aaKnown RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 NCBP1Q09161 790 aaKnown RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 KLHL30Q0D2K2 578 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 CCDC62Q6P9F0 684 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 TPTE2Q6XPS3 522 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 ARHGEF2Q92974 986 aaKnown RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 PSMB7Q99436 277 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 ZC3H12CQ9C0D7 883 aaKnown RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 NUCKS1Q9H1E3 243 aaKnown RBP8.66□□□□□ -1.02
NEDD9-204ENST00000448183 DENND2AQ9ULE3 1009 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 AGTPBP1Q9UPW5 1226 aa8.66□□□□□ -1.02
NEDD9-204ENST00000448183 RNMTO43148 476 aaKnown RBP8.65□□□□□ -1.02
NEDD9-204ENST00000448183 ZNF131P52739 623 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 HHATQ5VTY9 493 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 ADALQ6DHV7 355 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 SDCCAG8Q86SQ7 713 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-204ENST00000448183 SYCE1Q8N0S2 351 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 TSC1Q92574 1164 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 PLCB1Q9NQ66 1216 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 KIAA1468Q9P260 1216 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 CTTNBP2NLQ9P2B4 639 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 ZNF215Q9UL58 517 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-204ENST00000448183 A0A1W2PP64 1363 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 E7EVH7 732 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 TXKP42681 527 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 MRPS9P82933 396 aaKnown RBP8.65□□□□□ -1.02
NEDD9-204ENST00000448183 LIN9Q5TKA1 542 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 FCHSD1Q86WN1 690 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 VPS52Q8N1B4 723 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 GLT8D2Q9H1C3 349 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 VCXQ9H320 206 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 ZBTB21Q9ULJ3 1066 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 ZMYM4Q5VZL5 1548 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 ABCC2Q92887 1545 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 CHL1O00533 1208 aa8.65□□□□□ -1.02
NEDD9-204ENST00000448183 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.02
NEDD9-204ENST00000448183 NELFBQ8WX92 580 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms