RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 CCL15Q16663 113 aa30.21■■■□□ 2.43
UFD1-204ENST00000447868 B4GALNT3Q6L9W6 998 aa30.21■■■□□ 2.43
UFD1-204ENST00000447868 PICK1Q9NRD5 415 aa30.21■■■□□ 2.43
UFD1-204ENST00000447868 SIPA1L1O43166 1804 aa30.21■■■□□ 2.43
UFD1-204ENST00000447868 TESPA1A2RU30 521 aaPredicted RBP30.2■■■□□ 2.43
UFD1-204ENST00000447868 ZSCAN25Q6NSZ9 544 aa30.2■■■□□ 2.43
UFD1-204ENST00000447868 TNS4Q8IZW8 715 aa30.2■■■□□ 2.43
UFD1-204ENST00000447868 LCORLQ8N3X6 602 aa30.2■■■□□ 2.43
UFD1-204ENST00000447868 PI4K2BQ8TCG2 481 aa30.2■■■□□ 2.43
UFD1-204ENST00000447868 BRI3BPQ8WY22 251 aa30.2■■■□□ 2.43
UFD1-204ENST00000447868 PTPN18Q99952 460 aa30.2■■■□□ 2.43
UFD1-204ENST00000447868 CRNKL1Q9BZJ0 848 aaKnown RBP30.2■■■□□ 2.43
UFD1-204ENST00000447868 DOCK1Q14185 1865 aa30.19■■■□□ 2.42
UFD1-204ENST00000447868 CTNND1O60716 968 aaKnown RBP30.19■■■□□ 2.42
UFD1-204ENST00000447868 ALDH1A1P00352 501 aa30.19■■■□□ 2.42
UFD1-204ENST00000447868 ARMT1Q9H993 441 aa30.19■■■□□ 2.42
UFD1-204ENST00000447868 GLRX3O76003 335 aaKnown RBP30.18■■■□□ 2.42
UFD1-204ENST00000447868 MBD4O95243 580 aa30.18■■■□□ 2.42
UFD1-204ENST00000447868 SNAPC2Q13487 334 aa30.18■■■□□ 2.42
UFD1-204ENST00000447868 UBE3CQ15386 1083 aa30.18■■■□□ 2.42
UFD1-204ENST00000447868 OTUD7BQ6GQQ9 843 aa30.18■■■□□ 2.42
UFD1-204ENST00000447868 SMC5Q8IY18 1101 aa30.18■■■□□ 2.42
UFD1-204ENST00000447868 CRACR2BQ8N4Y2 399 aaPredicted RBP30.18■■■□□ 2.42
UFD1-204ENST00000447868 KBTBD3Q8NAB2 608 aa30.18■■■□□ 2.42
UFD1-204ENST00000447868 TRIM34Q9BYJ4 488 aa30.18■■■□□ 2.42
UFD1-204ENST00000447868 LNPKQ9C0E8 428 aa30.18■■■□□ 2.42
UFD1-204ENST00000447868 HERC5Q9UII4 1024 aaKnown RBP30.18■■■□□ 2.42
UFD1-204ENST00000447868 SALL3Q9BXA9 1300 aa30.18■■■□□ 2.42
UFD1-204ENST00000447868 HLA-DOAP06340 250 aa30.17■■■□□ 2.42
UFD1-204ENST00000447868 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.17■■■□□ 2.42
UFD1-204ENST00000447868 CETPP11597 493 aa30.16■■■□□ 2.42
UFD1-204ENST00000447868 PTPRAP18433 802 aa30.16■■■□□ 2.42
UFD1-204ENST00000447868 FOXP4Q8IVH2 680 aaPredicted RBP30.16■■■□□ 2.42
UFD1-204ENST00000447868 R3HDMLQ9H3Y0 253 aa30.16■■■□□ 2.42
UFD1-204ENST00000447868 NAV1Q8NEY1 1877 aa30.16■■■□□ 2.42
UFD1-204ENST00000447868 RRP1BQ14684 758 aaKnown RBP30.15■■■□□ 2.42
UFD1-204ENST00000447868 SDR42E1Q8WUS8 393 aa30.15■■■□□ 2.42
UFD1-204ENST00000447868 DNAJC18Q9H819 358 aa30.15■■■□□ 2.42
UFD1-204ENST00000447868 ZHX2Q9Y6X8 837 aa30.15■■■□□ 2.42
UFD1-204ENST00000447868 ATAD5Q96QE3 1844 aa30.14■■■□□ 2.42
UFD1-204ENST00000447868 PRKAB2O43741 272 aa30.13■■■□□ 2.41
UFD1-204ENST00000447868 CCDC84Q86UT8 332 aaPredicted RBP30.13■■■□□ 2.41
UFD1-204ENST00000447868 FAM43AQ8N2R8 423 aa30.13■■■□□ 2.41
UFD1-204ENST00000447868 PUS7LQ9H0K6 701 aaKnown RBP30.13■■■□□ 2.41
UFD1-204ENST00000447868 KCNH4Q9UQ05 1017 aa30.13■■■□□ 2.41
UFD1-204ENST00000447868 POLR3DP05423 398 aaPredicted RBP30.12■■■□□ 2.41
UFD1-204ENST00000447868 CAP2P40123 477 aa30.12■■■□□ 2.41
UFD1-204ENST00000447868 PDE1AP54750 535 aa30.12■■■□□ 2.41
UFD1-204ENST00000447868 METTL16Q86W50 562 aaKnown RBP30.12■■■□□ 2.41
UFD1-204ENST00000447868 CFHR5Q9BXR6 569 aa30.12■■■□□ 2.41
UFD1-204ENST00000447868 MCM9Q9NXL9 1143 aa30.12■■■□□ 2.41
UFD1-204ENST00000447868 DDX60LQ5H9U9 1706 aaKnown RBP30.12■■■□□ 2.41
UFD1-204ENST00000447868 GPR25O00155 361 aa30.11■■■□□ 2.41
UFD1-204ENST00000447868 RNF113AO15541 343 aaKnown RBP30.11■■■□□ 2.41
UFD1-204ENST00000447868 CRHR2Q13324 411 aa30.11■■■□□ 2.41
UFD1-204ENST00000447868 TTC6Q86TZ1 520 aa30.11■■■□□ 2.41
UFD1-204ENST00000447868 CHD1LQ86WJ1 897 aa30.11■■■□□ 2.41
UFD1-204ENST00000447868 FSD1Q9BTV5 496 aa30.11■■■□□ 2.41
UFD1-204ENST00000447868 DCP1AQ9NPI6 582 aaPredicted RBP30.11■■■□□ 2.41
UFD1-204ENST00000447868 STAP2Q9UGK3 403 aa30.11■■■□□ 2.41
UFD1-204ENST00000447868 PHIPQ8WWQ0 1821 aa30.1■■■□□ 2.41
UFD1-204ENST00000447868 BTBD19C9JJ37 291 aa30.1■■■□□ 2.41
UFD1-204ENST00000447868 NUCB1Q02818 461 aa30.1■■■□□ 2.41
UFD1-204ENST00000447868 ZNF296Q8WUU4 475 aaPredicted RBP30.1■■■□□ 2.41
UFD1-204ENST00000447868 AFG3L2Q9Y4W6 797 aa30.1■■■□□ 2.41
UFD1-204ENST00000447868 ZFYP08048 801 aaPredicted RBP30.09■■■□□ 2.41
UFD1-204ENST00000447868 PLCD1P51178 756 aa30.09■■■□□ 2.41
UFD1-204ENST00000447868 SERPINB13Q9UIV8 391 aa30.09■■■□□ 2.41
UFD1-204ENST00000447868 SLC4A4Q9Y6R1 1079 aa30.09■■■□□ 2.41
UFD1-204ENST00000447868 TRIM75PA6NK02 468 aa30.08■■■□□ 2.41
UFD1-204ENST00000447868 CXCL11O14625 94 aa30.08■■■□□ 2.41
UFD1-204ENST00000447868 GDF11O95390 407 aa30.08■■■□□ 2.41
UFD1-204ENST00000447868 TAF1CQ15572 869 aaPredicted RBP30.08■■■□□ 2.41
UFD1-204ENST00000447868 APPBP2Q92624 585 aa30.08■■■□□ 2.41
UFD1-204ENST00000447868 EHD4Q9H223 541 aa30.08■■■□□ 2.41
UFD1-204ENST00000447868 EVX2Q03828 476 aa30.07■■■□□ 2.4
UFD1-204ENST00000447868 LRRFIP1Q32MZ4 808 aaKnown RBP30.07■■■□□ 2.4
UFD1-204ENST00000447868 OSBP2Q969R2 916 aa30.07■■■□□ 2.4
UFD1-204ENST00000447868 ATP8A2Q9NTI2 1148 aa30.07■■■□□ 2.4
UFD1-204ENST00000447868 BAZ2AQ9UIF9 1905 aaKnown RBP30.06■■■□□ 2.4
UFD1-204ENST00000447868 CYP2D6P10635 497 aa30.06■■■□□ 2.4
UFD1-204ENST00000447868 JAG1P78504 1218 aa30.06■■■□□ 2.4
UFD1-204ENST00000447868 MOGSQ13724 837 aa30.06■■■□□ 2.4
UFD1-204ENST00000447868 SHROOM1Q2M3G4 852 aaPredicted RBP30.06■■■□□ 2.4
UFD1-204ENST00000447868 ZFYVE28Q9HCC9 887 aa30.06■■■□□ 2.4
UFD1-204ENST00000447868 FKTNO75072 461 aa30.05■■■□□ 2.4
UFD1-204ENST00000447868 DGKZQ13574 1117 aa30.05■■■□□ 2.4
UFD1-204ENST00000447868 NOM1Q5C9Z4 860 aaKnown RBP30.05■■■□□ 2.4
UFD1-204ENST00000447868 A0A0G2JLL6 359 aaPredicted RBP30.04■■■□□ 2.4
UFD1-204ENST00000447868 USP17L5A8MUK1 530 aa30.04■■■□□ 2.4
UFD1-204ENST00000447868 GADL1Q6ZQY3 521 aa30.04■■■□□ 2.4
UFD1-204ENST00000447868 PRRT2Q7Z6L0 340 aaPredicted RBP30.04■■■□□ 2.4
UFD1-204ENST00000447868 ANKRD23Q86SG2 305 aa30.04■■■□□ 2.4
UFD1-204ENST00000447868 DDRGK1Q96HY6 314 aa30.04■■■□□ 2.4
UFD1-204ENST00000447868 STRBPQ96SI9 672 aaKnown RBP30.04■■■□□ 2.4
UFD1-204ENST00000447868 PTPRFP10586 1907 aa30.04■■■□□ 2.4
UFD1-204ENST00000447868 M0R2C6 588 aa30.03■■■□□ 2.4
UFD1-204ENST00000447868 PDHXO00330 501 aa30.03■■■□□ 2.4
UFD1-204ENST00000447868 ASNSP08243 561 aa30.03■■■□□ 2.4
UFD1-204ENST00000447868 SPP2Q13103 211 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms