RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 TUBB4BP68371 445 aa18.19■□□□□ 0.5
CNOT3-204ENST00000447684 KRT40Q6A162 431 aa18.19■□□□□ 0.5
CNOT3-204ENST00000447684 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.19■□□□□ 0.5
CNOT3-204ENST00000447684 RALYLQ86SE5 291 aaKnown RBP18.19■□□□□ 0.5
CNOT3-204ENST00000447684 COPRSQ9NQ92 184 aa18.19■□□□□ 0.5
CNOT3-204ENST00000447684 HELLSQ9NRZ9 838 aa18.19■□□□□ 0.5
CNOT3-204ENST00000447684 DACH1Q9UI36 760 aa18.19■□□□□ 0.5
CNOT3-204ENST00000447684 GUCA1BQ9UMX6 200 aa18.19■□□□□ 0.5
CNOT3-204ENST00000447684 MAST3O60307 1309 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 PRPF6O94906 941 aaKnown RBP18.18■□□□□ 0.5
CNOT3-204ENST00000447684 PTPN12Q05209 780 aaKnown RBP18.18■□□□□ 0.5
CNOT3-204ENST00000447684 TUBB2AQ13885 445 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 ENOX1Q8TC92 643 aaKnown RBP18.18■□□□□ 0.5
CNOT3-204ENST00000447684 SLF1Q9BQI6 1058 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 TUBB2BQ9BVA1 445 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 HDAC6Q9UBN7 1215 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 SERTAD1Q9UHV2 236 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 CDHR2Q9BYE9 1310 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 GOLGA6CA6NDK9 693 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 COBLO75128 1261 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 PPP6R2O75170 966 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 GOLGA6DP0CG33 693 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 IBSPP21815 317 aaPredicted RBP18.18■□□□□ 0.5
CNOT3-204ENST00000447684 INPP5BP32019 993 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 TIMM10P62072 90 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 TRDNQ13061 729 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 PTPAQ15257 358 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 MAP9Q49MG5 647 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 ABTB2Q8N961 1025 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 ANKRD24Q8TF21 1146 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 GOLGA6AQ9NYA3 693 aa18.18■□□□□ 0.5
CNOT3-204ENST00000447684 RASGRP2Q7LDG7 609 aa18.17■□□□□ 0.5
CNOT3-204ENST00000447684 UBE3BQ7Z3V4 1068 aa18.17■□□□□ 0.5
CNOT3-204ENST00000447684 MLKLQ8NB16 471 aa18.17■□□□□ 0.5
CNOT3-204ENST00000447684 TTF2Q9UNY4 1162 aaKnown RBP18.17■□□□□ 0.5
CNOT3-204ENST00000447684 M0R2C6 588 aa18.17■□□□□ 0.5
CNOT3-204ENST00000447684 TUBBP07437 444 aa18.17■□□□□ 0.5
CNOT3-204ENST00000447684 CCT6AP40227 531 aaKnown RBP18.17■□□□□ 0.5
CNOT3-204ENST00000447684 NAA15Q9BXJ9 866 aaKnown RBP18.17■□□□□ 0.5
CNOT3-204ENST00000447684 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 SRGAP2O75044 1071 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 MFAP3LO75121 409 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 LTKP29376 864 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 USP8P40818 1118 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
CNOT3-204ENST00000447684 GRIN1Q05586 938 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 GCKRQ14397 625 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 MED15Q96RN5 788 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
CNOT3-204ENST00000447684 DDX21Q9NR30 783 aaKnown RBP eCLIP18.16■□□□□ 0.5
CNOT3-204ENST00000447684 TRIM10Q9UDY6 481 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 A0A1B0GTH6 734 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
CNOT3-204ENST00000447684 FXR1P51114 621 aaKnown RBP eCLIP18.16■□□□□ 0.5
CNOT3-204ENST00000447684 IRAK1P51617 712 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 SETQ01105 290 aaPredicted RBP18.16■□□□□ 0.5
CNOT3-204ENST00000447684 IMMTQ16891 758 aaKnown RBP18.16■□□□□ 0.5
CNOT3-204ENST00000447684 ZMYM1Q5SVZ6 1142 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 KCNV1Q6PIU1 500 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 IP6K1Q92551 441 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 FAM212AQ96EL1 285 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 JPH2Q9BR39 696 aaPredicted RBP18.16■□□□□ 0.5
CNOT3-204ENST00000447684 SUFUQ9UMX1 484 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 AMOTL2Q9Y2J4 779 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 CAPN7Q9Y6W3 813 aa18.16■□□□□ 0.5
CNOT3-204ENST00000447684 OVOS2A0A0G2JMS6 1433 aa18.15■□□□□ 0.5
CNOT3-204ENST00000447684 PALLDQ8WX93 1383 aa18.15■□□□□ 0.5
CNOT3-204ENST00000447684 CLGNO14967 610 aa18.15■□□□□ 0.5
CNOT3-204ENST00000447684 FKBP4Q02790 459 aaKnown RBP eCLIP18.15■□□□□ 0.5
CNOT3-204ENST00000447684 TRIM29Q14134 588 aa18.15■□□□□ 0.5
CNOT3-204ENST00000447684 WDR93Q6P2C0 686 aa18.15■□□□□ 0.5
CNOT3-204ENST00000447684 KRI1Q8N9T8 703 aaKnown RBP18.15■□□□□ 0.5
CNOT3-204ENST00000447684 CDC25AP30304 524 aa18.15■□□□□ 0.5
CNOT3-204ENST00000447684 RFX5P48382 616 aaPredicted RBP18.15■□□□□ 0.5
CNOT3-204ENST00000447684 AARSP49588 968 aaKnown RBP eCLIP18.15■□□□□ 0.5
CNOT3-204ENST00000447684 GSCP56915 257 aaPredicted RBP18.15■□□□□ 0.5
CNOT3-204ENST00000447684 COG1Q8WTW3 980 aa18.15■□□□□ 0.5
CNOT3-204ENST00000447684 GNGT1P63211 74 aa18.14■□□□□ 0.5
CNOT3-204ENST00000447684 FILIP1LQ4L180 1135 aa18.14■□□□□ 0.5
CNOT3-204ENST00000447684 MICU3Q86XE3 530 aa18.14■□□□□ 0.5
CNOT3-204ENST00000447684 CAGE1Q8TC20 777 aa18.14■□□□□ 0.5
CNOT3-204ENST00000447684 NUP88Q99567 741 aaPredicted RBP18.14■□□□□ 0.5
CNOT3-204ENST00000447684 VIPAS39Q9H9C1 493 aa18.14■□□□□ 0.5
CNOT3-204ENST00000447684 USP14P54578 494 aa18.14■□□□□ 0.49
CNOT3-204ENST00000447684 MAP3K14Q99558 947 aa18.14■□□□□ 0.49
CNOT3-204ENST00000447684 UBE2Q2LH0YL09 131 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 SMYD4Q8IYR2 804 aaPredicted RBP18.13■□□□□ 0.49
CNOT3-204ENST00000447684 FBXL16Q8N461 479 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 MMS19Q96T76 1030 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 CAPS2Q9BXY5 557 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 WWC3Q9ULE0 1092 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 PXDNQ92626 1479 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 RGPD2P0DJD1 1756 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 GOLGA6BA6NDN3 693 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 ATP5J2-PTCD1G3V325 749 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 RNF113AO15541 343 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms