RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 EPC1Q9H2F5 836 aa12.69□□□□□ -0.38
ZNF550-204ENST00000447310 BLZF1Q9H2G9 400 aa12.69□□□□□ -0.38
ZNF550-204ENST00000447310 CAMSAP1Q5T5Y3 1602 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 SETD1BQ9UPS6 1966 aaKnown RBP12.68□□□□□ -0.38
ZNF550-204ENST00000447310 PI16Q6UXB8 463 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 TAX1BP1Q86VP1 789 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 VPS54Q9P1Q0 977 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 SEC63Q9UGP8 760 aaKnown RBP12.68□□□□□ -0.38
ZNF550-204ENST00000447310 ZEB2O60315 1214 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 AMPD3Q01432 767 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 DZIP1Q86YF9 867 aaKnown RBP12.68□□□□□ -0.38
ZNF550-204ENST00000447310 AFAP1L1Q8TED9 768 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 PARD6BQ9BYG5 372 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 ZCCHC17Q9NP64 241 aaKnown RBP12.68□□□□□ -0.38
ZNF550-204ENST00000447310 A2ML1A8K2U0 1454 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 ZMYM6O95789 1325 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 SH3TC1Q8TE82 1336 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 FGFR1OPO95684 399 aaKnown RBP12.68□□□□□ -0.38
ZNF550-204ENST00000447310 PHKG2P15735 406 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 CCZ1BP86790 482 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 CCZ1P86791 482 aaPredicted RBP12.68□□□□□ -0.38
ZNF550-204ENST00000447310 TUBB2AQ13885 445 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 VSTM4Q8IW00 320 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 GRAMD1CQ8IYS0 662 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 FAM76AQ8TAV0 307 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 CALML4Q96GE6 196 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 TSG101Q99816 390 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 TUBB2BQ9BVA1 445 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 NAA15Q9BXJ9 866 aaKnown RBP12.68□□□□□ -0.38
ZNF550-204ENST00000447310 SEPT11Q9NVA2 429 aaKnown RBP12.68□□□□□ -0.38
ZNF550-204ENST00000447310 WWC3Q9ULE0 1092 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 CPS1P31327 1500 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 NEXMIFQ5QGS0 1516 aa12.68□□□□□ -0.38
ZNF550-204ENST00000447310 GNAT2P19087 354 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 PDE4BQ07343 736 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 TBC1D8BQ0IIM8 1120 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 CCDC40Q4G0X9 1142 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 APOA5Q6Q788 366 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 GYS2P54840 703 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 ARMCX5Q6P1M9 558 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 FCHSD1Q86WN1 690 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 NOP2P46087 812 aaKnown RBP12.67□□□□□ -0.38
ZNF550-204ENST00000447310 WWC2Q6AWC2 1192 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 GPIHBP1Q8IV16 184 aa12.67□□□□□ -0.38
ZNF550-204ENST00000447310 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
ZNF550-204ENST00000447310 MAGEB6P1A0A0J9YX57 407 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
ZNF550-204ENST00000447310 TMCO5BA8MYB1 307 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
ZNF550-204ENST00000447310 TMEM232C9JQI7 657 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 COBLO75128 1261 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 PAK1Q13153 545 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 E4F1Q66K89 784 aaPredicted RBP12.66□□□□□ -0.38
ZNF550-204ENST00000447310 PIK3AP1Q6ZUJ8 805 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 ATRIPQ8WXE1 791 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 SAMSN1Q9NSI8 373 aaKnown RBP12.66□□□□□ -0.38
ZNF550-204ENST00000447310 ZC3H13Q5T200 1668 aaKnown RBP12.66□□□□□ -0.38
ZNF550-204ENST00000447310 INO80Q9ULG1 1556 aaPredicted RBP12.66□□□□□ -0.38
ZNF550-204ENST00000447310 PPP6R2O75170 966 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 MICALCLQ6ZW33 695 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 PUS7LQ9H0K6 701 aaKnown RBP12.66□□□□□ -0.38
ZNF550-204ENST00000447310 PRDM4Q9UKN5 801 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 OPA1O60313 960 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 SRGAP1Q7Z6B7 1085 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 C19orf44Q9H6X5 657 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 CDC23Q9UJX2 597 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 RTL9Q8NET4 1388 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 TTC38Q5R3I4 469 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 AKNAD1Q5T1N1 836 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 DTHD1Q6ZMT9 781 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 PSMB7Q99436 277 aa12.66□□□□□ -0.38
ZNF550-204ENST00000447310 CASP14P31944 242 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 ARID5AQ03989 594 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 IFFO1Q0D2I5 559 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 ARHGEF25Q86VW2 580 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 ALDH8A1Q9H2A2 487 aaPredicted RBP12.65□□□□□ -0.38
ZNF550-204ENST00000447310 ATP8B1O43520 1251 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 TMEM266Q2M3C6 531 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 GIMAP7Q8NHV1 300 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 IFT81Q8WYA0 676 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 CDC5LQ99459 802 aaKnown RBP12.65□□□□□ -0.38
ZNF550-204ENST00000447310 HINFPQ9BQA5 517 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 RAB34Q9BZG1 259 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 CD163L1Q9NR16 1453 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 PDE6AP16499 860 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 CCDC152Q4G0S7 254 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 SMYD4Q8IYR2 804 aaPredicted RBP12.65□□□□□ -0.38
ZNF550-204ENST00000447310 SLC35F6Q8N357 371 aa12.65□□□□□ -0.38
ZNF550-204ENST00000447310 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
ZNF550-204ENST00000447310 SOWAHDA6NJG2 315 aa12.64□□□□□ -0.39
ZNF550-204ENST00000447310 ATP2C2O75185 946 aa12.64□□□□□ -0.39
ZNF550-204ENST00000447310 TRIM14Q14142 442 aa12.64□□□□□ -0.39
ZNF550-204ENST00000447310 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
ZNF550-204ENST00000447310 CCDC43Q96MW1 224 aaKnown RBP12.64□□□□□ -0.39
ZNF550-204ENST00000447310 CCDC151A5D8V7 595 aa12.64□□□□□ -0.39
ZNF550-204ENST00000447310 CALM1P0DP23 149 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms