RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ALS2Q96Q42 1657 aa10.9□□□□□ -0.66
SMARCE1-206ENST00000447024 NFIAQ12857 509 aa10.9□□□□□ -0.66
SMARCE1-206ENST00000447024 FAM117BQ6P1L5 589 aa10.9□□□□□ -0.66
SMARCE1-206ENST00000447024 KLHL23Q8NBE8 558 aa10.9□□□□□ -0.66
SMARCE1-206ENST00000447024 PCGF6Q9BYE7 350 aa10.9□□□□□ -0.66
SMARCE1-206ENST00000447024 PBX4Q9BYU1 374 aa10.9□□□□□ -0.66
SMARCE1-206ENST00000447024 C7orf69Q9H7B7 122 aa10.9□□□□□ -0.66
SMARCE1-206ENST00000447024 PAX4O43316 350 aa10.89□□□□□ -0.67
SMARCE1-206ENST00000447024 IRAK1P51617 712 aa10.89□□□□□ -0.67
SMARCE1-206ENST00000447024 DUOXA2Q1HG44 320 aa10.89□□□□□ -0.67
SMARCE1-206ENST00000447024 FOXD4L4Q8WXT5 416 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-206ENST00000447024 KRTAP9-9Q9BYP9 154 aa10.89□□□□□ -0.67
SMARCE1-206ENST00000447024 KRTAP9-4Q9BYQ2 154 aa10.89□□□□□ -0.67
SMARCE1-206ENST00000447024 SH2B1Q9NRF2 756 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-206ENST00000447024 STIM2Q9P246 746 aa10.89□□□□□ -0.67
SMARCE1-206ENST00000447024 OAS3Q9Y6K5 1087 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-206ENST00000447024 ZBTB39O15060 712 aa10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 DDX3YO15523 660 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 ADAM11O75078 769 aa10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 GP2P55259 537 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 PPIP5K1Q6PFW1 1433 aa10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 TRIM42Q8IWZ5 723 aa10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 CEP120Q8N960 986 aa10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 UBASH3BQ8TF42 649 aa10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 MYRFLQ96LU7 910 aa10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 SLIT2O94813 1529 aa10.88□□□□□ -0.67
SMARCE1-206ENST00000447024 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-206ENST00000447024 ATRNO75882 1429 aa10.87□□□□□ -0.67
SMARCE1-206ENST00000447024 BTBD11A6QL63 1104 aa10.87□□□□□ -0.67
SMARCE1-206ENST00000447024 NCAPG2Q86XI2 1143 aa10.87□□□□□ -0.67
SMARCE1-206ENST00000447024 UNC5CLQ8IV45 518 aa10.87□□□□□ -0.67
SMARCE1-206ENST00000447024 ABTB2Q8N961 1025 aa10.87□□□□□ -0.67
SMARCE1-206ENST00000447024 HMX2A2RU54 273 aa10.86□□□□□ -0.67
SMARCE1-206ENST00000447024 PTPRAP18433 802 aa10.86□□□□□ -0.67
SMARCE1-206ENST00000447024 RNF43Q68DV7 783 aa10.86□□□□□ -0.67
SMARCE1-206ENST00000447024 KLHDC7BQ96G42 594 aa10.86□□□□□ -0.67
SMARCE1-206ENST00000447024 SEC31BQ9NQW1 1179 aa10.86□□□□□ -0.67
SMARCE1-206ENST00000447024 NINLQ9Y2I6 1382 aa10.86□□□□□ -0.67
SMARCE1-206ENST00000447024 NWD2Q9ULI1 1742 aa10.86□□□□□ -0.67
SMARCE1-206ENST00000447024 BCL9LQ86UU0 1499 aa10.86□□□□□ -0.67
SMARCE1-206ENST00000447024 USP6P35125 1406 aa10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 ABCA3Q99758 1704 aa10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 SPINK2P20155 84 aa10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 TMEM164Q5U3C3 297 aa10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 POP1Q99575 1024 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 DBNDD2Q9BQY9 259 aa10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 ADAM19Q9H013 955 aa10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 TMEM63CQ9P1W3 806 aa10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 KANSL3Q9P2N6 904 aa10.85□□□□□ -0.67
SMARCE1-206ENST00000447024 TTC21AQ8NDW8 1320 aa10.84□□□□□ -0.67
SMARCE1-206ENST00000447024 FAM177BA6PVY3 158 aa10.84□□□□□ -0.67
SMARCE1-206ENST00000447024 GRIK1P39086 918 aa10.84□□□□□ -0.67
SMARCE1-206ENST00000447024 VPS72Q15906 364 aa10.84□□□□□ -0.67
SMARCE1-206ENST00000447024 INTS5Q6P9B9 1019 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-206ENST00000447024 ELP3Q9H9T3 547 aa10.84□□□□□ -0.67
SMARCE1-206ENST00000447024 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-206ENST00000447024 USP19O94966 1318 aa10.84□□□□□ -0.67
SMARCE1-206ENST00000447024 FAM83GA6ND36 823 aa10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 PRR19A6NJB7 356 aa10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 H3BRJ5 948 aa10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 ADAMTS4O75173 837 aa10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 PDE12Q6L8Q7 609 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 FAM20CQ8IXL6 584 aa10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 CCER1Q8TC90 406 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 FMNL2Q96PY5 1086 aa10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 SSH2Q76I76 1423 aa10.83□□□□□ -0.68
SMARCE1-206ENST00000447024 COL14A1Q05707 1796 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-206ENST00000447024 CPDO75976 1380 aa10.82□□□□□ -0.68
SMARCE1-206ENST00000447024 CRYBG1Q9Y4K1 1723 aa10.82□□□□□ -0.68
SMARCE1-206ENST00000447024 ST20-MTHFSA0A0A6YYL1 179 aa10.82□□□□□ -0.68
SMARCE1-206ENST00000447024 ATG7O95352 703 aa10.82□□□□□ -0.68
SMARCE1-206ENST00000447024 TAL1P17542 331 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-206ENST00000447024 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-206ENST00000447024 TESK2Q96S53 571 aa10.82□□□□□ -0.68
SMARCE1-206ENST00000447024 USP47Q96K76 1375 aa10.81□□□□□ -0.68
SMARCE1-206ENST00000447024 ZNF438Q7Z4V0 828 aa10.81□□□□□ -0.68
SMARCE1-206ENST00000447024 CLEC10AQ8IUN9 316 aa10.81□□□□□ -0.68
SMARCE1-206ENST00000447024 FAM83CQ9BQN1 747 aa10.81□□□□□ -0.68
SMARCE1-206ENST00000447024 ZMYND15Q9H091 742 aa10.81□□□□□ -0.68
SMARCE1-206ENST00000447024 PRDM11Q9NQV5 511 aa10.81□□□□□ -0.68
SMARCE1-206ENST00000447024 TERF2IPQ9NYB0 399 aa10.81□□□□□ -0.68
SMARCE1-206ENST00000447024 CNTN3Q9P232 1028 aa10.81□□□□□ -0.68
SMARCE1-206ENST00000447024 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-206ENST00000447024 SART1O43290 800 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 GCP02774 474 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 BMP3P12645 472 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 ACPPP15309 386 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 TXKP42681 527 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 PREPP48147 710 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 TMF1P82094 1093 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 ANKRD34AQ69YU3 496 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 HDGFL2Q7Z4V5 671 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 ATCAYQ86WG3 371 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 DTX1Q86Y01 620 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 WNT8BQ93098 351 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 SALL4Q9UJQ4 1053 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 RGS12O14924 1447 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 TTC21BQ7Z4L5 1316 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms