RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
COL6A4P1-201ENST00000446690 ENAHQ8N8S7 591 aaPredicted RBP11.07□□□□□ -0.64
COL6A4P1-201ENST00000446690 TGFBRAP1Q8WUH2 860 aa11.07□□□□□ -0.64
COL6A4P1-201ENST00000446690 ARPP21Q9UBL0 812 aaPredicted RBP11.07□□□□□ -0.64
COL6A4P1-201ENST00000446690 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 CCDC196A0A1B0GTZ2 297 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 NMT2O60551 498 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 GUCY1A2P33402 732 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 KIF23Q02241 960 aaPredicted RBP11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 PDE4BQ07343 736 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 STK38Q15208 465 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 SEC23AQ15436 765 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 MAP3K11Q16584 847 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 MFSD14BQ5SR56 506 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 C15orf52Q6ZUT6 534 aaKnown RBP11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 BRAPQ7Z569 592 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 SP8Q8IXZ3 490 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 KLRG2A4D1S0 409 aaPredicted RBP11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 TSPY2A6NKD2 308 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 LDHCP07864 332 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 SRGNP10124 158 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 IL1R1P14778 569 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 IFNAR1P17181 557 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 MYSM1Q5VVJ2 828 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 CATIPQ7Z7H3 387 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 ZNF622Q969S3 477 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 MTA3Q9BTC8 594 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 PODXL2Q9NZ53 605 aa11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 SAP30BPQ9UHR5 308 aaKnown RBP11.06□□□□□ -0.64
COL6A4P1-201ENST00000446690 CCDC192P0DO97 292 aa11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 PCP11498 1178 aaKnown RBP11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 GTF2IP78347 998 aa11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 MAPKAPK5Q8IW41 473 aa11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 CRACR2BQ8N4Y2 399 aaPredicted RBP11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 FLAD1Q8NFF5 587 aa11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 WASF1Q92558 559 aa11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 DYNLL2Q96FJ2 89 aa11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 TMX4Q9H1E5 349 aaPredicted RBP11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 DDX19AQ9NUU7 478 aaKnown RBP11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 RTEL1Q9NZ71 1219 aa11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 ATP6V0A2Q9Y487 856 aa11.05□□□□□ -0.64
COL6A4P1-201ENST00000446690 F8W031 263 aaPredicted RBP11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 G3V3G9 751 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 NPR1P16066 1061 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 PDE6BP35913 854 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 BTDP43251 543 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 AKAP17AQ02040 695 aaKnown RBP11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 GLIPR1L2Q4G1C9 344 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 SBK1Q52WX2 424 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 DCAF8Q5TAQ9 597 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 TMED8Q6PL24 325 aaPredicted RBP11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 AMOTL1Q8IY63 956 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 PPP1R9BQ96SB3 815 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 ZC3H12CQ9C0D7 883 aaKnown RBP11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 MKNK2Q9HBH9 465 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 PCDHA7Q9UN72 937 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 KCNJ14Q9UNX9 436 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 TIAM2Q8IVF5 1701 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 MROH7-TTC4A0A0A0MT08 1334 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 hCG_1642624A0A1W2PR95 340 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 FGRP09769 529 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 ALDH1B1P30837 517 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 CCDC73Q6ZRK6 1079 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 MPNDQ8N594 471 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 FSIP1Q8NA03 581 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 LINC00301Q8NCQ3 95 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 GOLPH3LQ9H4A5 285 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 CLSTN2Q9H4D0 955 aa11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL6A4P1-201ENST00000446690 SPTLC2O15270 562 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 TFAP4Q01664 338 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 SAFBQ15424 915 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 C12orf60Q5U649 245 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 ANO1Q5XXA6 986 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 DPP8Q6V1X1 898 aaPredicted RBP11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 TMC4Q7Z404 712 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 FUCA2Q9BTY2 467 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 RTFDC1Q9BY42 306 aaPredicted RBP11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 STK36Q9NRP7 1315 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 A0A1B0GVL5 298 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 ORC4O43929 436 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 DEXIO95424 95 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 MARCKSP29966 332 aaPredicted RBP11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 KCNG4Q8TDN1 519 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
COL6A4P1-201ENST00000446690 BTBD18B2RXH4 712 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 ZBTB22O15209 634 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 PLEKHA8P1O95397 391 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 PLCD1P51178 756 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 PPP4CP60510 307 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 TYRO3Q06418 890 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 ADALQ6DHV7 355 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 SASS6Q6UVJ0 657 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 TEX11Q8IYF3 940 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms