RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 LAMB1P07942 1786 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 CENPFP49454 3210 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 BRCA2P51587 3418 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 ELL2O00472 640 aaPredicted RBP7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 ZNF853P0CG23 659 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 CCT4P50991 539 aaKnown RBP7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 CTSWP56202 376 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 NNTQ13423 1086 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 HABP4Q5JVS0 413 aaKnown RBP7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 SH3BP5LQ7L8J4 393 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 ARMC9Q7Z3E5 817 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 SH3RF1Q7Z6J0 888 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 TXNRD3Q86VQ6 643 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 APOBEC3FQ8IUX4 373 aaKnown RBP7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 METTL22Q9BUU2 404 aaPredicted RBP7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 COA1Q9GZY4 146 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 BSDC1Q9NW68 430 aaPredicted RBP7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 ANGEL1Q9UNK9 670 aaKnown RBP7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 MINPP1Q9UNW1 487 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 FZD1Q9UP38 647 aa7.48□□□□□ -1.21
HMGN1P36-201ENST00000446623 MKI67P46013 3256 aaKnown RBP7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 MANSC4A6NHS7 340 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 DDX58O95786 925 aaKnown RBP7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 KLRK1P26718 216 aa7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 MMP14P50281 582 aa7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 WDR43Q15061 677 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 OTOP1Q7RTM1 612 aa7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 KIAA0825Q8IV33 1275 aa7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 TTLL11Q8NHH1 800 aa7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 ZBED3Q96IU2 234 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 GREM2Q9H772 168 aa7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 TRIM17Q9Y577 477 aa7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 COL1A1P02452 1464 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 RANBP2P49792 3224 aaKnown RBP7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 MYBBP1AQ9BQG0 1328 aaKnown RBP7.47□□□□□ -1.21
HMGN1P36-201ENST00000446623 SSC5DA1L4H1 1573 aa7.46□□□□□ -1.21
HMGN1P36-201ENST00000446623 ECM29Q5VYK3 1845 aa7.46□□□□□ -1.21
HMGN1P36-201ENST00000446623 IGF2BP3O00425 579 aaKnown RBP eCLIP7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 ADH1CP00326 375 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 IGKV5-2P06315 115 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 ZBTB48P10074 688 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 INHBEP58166 350 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 TMEM259Q4ZIN3 620 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 INTS3Q68E01 1043 aaKnown RBP7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 TTLL5Q6EMB2 1281 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 C8orf58Q8NAV2 365 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 SLC10A4Q96EP9 437 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 CLMNQ96JQ2 1002 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 ARHGAP9Q9BRR9 750 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 DEFB129Q9H1M3 183 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 ATP13A2Q9NQ11 1180 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 IFT57Q9NWB7 429 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 ADAMTS8Q9UP79 889 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 MAP3K2Q9Y2U5 619 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 LEMD3Q9Y2U8 911 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 ZNF804BA4D1E1 1349 aa7.46□□□□□ -1.22
HMGN1P36-201ENST00000446623 PI4KAP2A4QPH2 592 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 CAPN5O15484 640 aaPredicted RBP7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 BMP1P13497 986 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 IGHMBP2P38935 993 aaKnown RBP7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 GNAI1P63096 354 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 GTF2IP78347 998 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 MAP3K11Q16584 847 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 CWF19L2Q2TBE0 894 aaKnown RBP7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 KSR2Q6VAB6 950 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 PI4KAP1Q8N8J0 262 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 MTMR14Q8NCE2 650 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 CD99L2Q8TCZ2 262 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 WNK4Q96J92 1243 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 CDK15Q96Q40 435 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 ANKRD2Q9GZV1 360 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 PTPN22Q9Y2R2 807 aa7.45□□□□□ -1.22
HMGN1P36-201ENST00000446623 OTOFQ9HC10 1997 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 UNCXA6NJT0 531 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 PPP1R12BO60237 982 aaPredicted RBP7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 NR3C2P08235 984 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 EN2P19622 333 aaPredicted RBP7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 GRM5P41594 1212 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 WDR4P57081 412 aaKnown RBP7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 CALD1Q05682 793 aaKnown RBP7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 NEXNQ0ZGT2 675 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 CRHR2Q13324 411 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 DLGAP5Q15398 846 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 CCDC30Q5VVM6 783 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 PDXDC2PQ6P474 469 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 VASH1Q7L8A9 365 aaPredicted RBP7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 UBE3BQ7Z3V4 1068 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 ZBTB33Q86T24 672 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 CERS5Q8N5B7 392 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 GPKOWQ92917 476 aaPredicted RBP eCLIP7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 ARMC5Q96C12 935 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 ERO1AQ96HE7 468 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 C1QTNF2Q9BXJ5 285 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 CHMP4AQ9BY43 222 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 TRIM34Q9BYJ4 488 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 PCDHAC2Q9Y5I4 1007 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 PPP2R3BQ9Y5P8 575 aa7.44□□□□□ -1.22
HMGN1P36-201ENST00000446623 A0A1B0GUL6 1792 aa7.43□□□□□ -1.22
HMGN1P36-201ENST00000446623 CLRN2A0PK11 232 aa7.43□□□□□ -1.22
HMGN1P36-201ENST00000446623 NEURL1BA8MQ27 555 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms