RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
HMGB1P48-201ENST00000446155 H2AFB2P0C5Z0 115 aa7.06□□□□□ -1.28
HMGB1P48-201ENST00000446155 HCLS1P14317 486 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P48-201ENST00000446155 MAP4P27816 1152 aaKnown RBP7.06□□□□□ -1.28
HMGB1P48-201ENST00000446155 RSPO4Q2I0M5 234 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P48-201ENST00000446155 C8orf37Q96NL8 207 aa7.06□□□□□ -1.28
HMGB1P48-201ENST00000446155 ATE1O95260 518 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 CAP2P40123 477 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 USP11P51784 963 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 DOC2BQ14184 412 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 CWF19L2Q2TBE0 894 aaKnown RBP7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 SEZ6Q53EL9 994 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 GPAT2Q6NUI2 795 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 PRR23CQ6ZRP0 262 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 CLEC10AQ8IUN9 316 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 SMYD4Q8IYR2 804 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 REXO1Q8N1G1 1221 aaKnown RBP7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 NKD1Q969G9 470 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 EHMT1Q9H9B1 1298 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 BRMS1Q9HCU9 246 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 RAXQ9Y2V3 346 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 CORINQ9Y5Q5 1042 aa7.05□□□□□ -1.28
HMGB1P48-201ENST00000446155 SHROOM4Q9ULL8 1493 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 PRAMEF27A3QJZ7 478 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 DYNC1LI2O43237 492 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 NFICP08651 508 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 RAB6AP20340 208 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 GRK4P32298 578 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 SOX9P48436 509 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 ZC3H6P61129 1189 aaKnown RBP7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 TMEM201Q5SNT2 666 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 DIEXFQ68CQ4 756 aaKnown RBP7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 BEND4Q6ZU67 534 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 SLC43A3Q8NBI5 491 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 GATA6Q92908 595 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 SPATA32Q96LK8 384 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 PSMG3-AS1Q96PY0 264 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 FAM83CQ9BQN1 747 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 FBRSQ9HAH7 460 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 PIDD1Q9HB75 910 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 ADAM30Q9UKF2 790 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 INPP5FQ9Y2H2 1132 aa7.04□□□□□ -1.28
HMGB1P48-201ENST00000446155 GRIN3BO60391 1043 aa7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 HTR3BO95264 441 aa7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 COL9A2Q14055 689 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 SLBPQ14493 270 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 ZNF507Q8TCN5 953 aa7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 ACSF2Q96CM8 615 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 YIPF2Q9BWQ6 316 aa7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 C7orf69Q9H7B7 122 aa7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 C1GALT1Q9NS00 363 aa7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 GINM1Q9NU53 330 aa7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 PCOLCE2Q9UKZ9 415 aa7.03□□□□□ -1.28
HMGB1P48-201ENST00000446155 FAM95CA0A1B0GW59 222 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 DNAJA2O60884 412 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 ATF4P18848 351 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 ETF1P62495 437 aaKnown RBP7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 CLCQ05315 142 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 MAP7Q14244 749 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 NKG7Q16617 165 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 MRPL41Q8IXM3 137 aaKnown RBP7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 KCT2Q8NC54 265 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 SEC16BQ96JE7 1060 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 GMLQ99445 158 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 CAPN10Q9HC96 672 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 REV1Q9UBZ9 1251 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 TJP2Q9UDY2 1190 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 PRKAG2Q9UGJ0 569 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 ZNRF3Q9ULT6 936 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 PCDHB14Q9Y5E9 798 aa7.02□□□□□ -1.29
HMGB1P48-201ENST00000446155 HMX2A2RU54 273 aa7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 DYRK3O43781 588 aa7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 RNGTTO60942 597 aaKnown RBP7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 PGRP06401 933 aa7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 ZNF165P49910 485 aa7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 PDE4BQ07343 736 aa7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 NAALADL2Q58DX5 795 aa7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 HID1Q8IV36 788 aa7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 EFR3BQ9Y2G0 817 aa7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 DAGLAQ9Y4D2 1042 aa7.01□□□□□ -1.29
HMGB1P48-201ENST00000446155 CST3P01034 146 aaPredicted RBP7□□□□□ -1.29
HMGB1P48-201ENST00000446155 PLCG1P19174 1290 aa7□□□□□ -1.29
HMGB1P48-201ENST00000446155 RXRBP28702 533 aa7□□□□□ -1.29
HMGB1P48-201ENST00000446155 PAOXQ6QHF9 649 aa7□□□□□ -1.29
HMGB1P48-201ENST00000446155 MCATQ8IVS2 390 aaKnown RBP7□□□□□ -1.29
HMGB1P48-201ENST00000446155 PHF6Q8IWS0 365 aaKnown RBP eCLIP7□□□□□ -1.29
HMGB1P48-201ENST00000446155 TMEM87BQ96K49 555 aa7□□□□□ -1.29
HMGB1P48-201ENST00000446155 KCNF1Q9H3M0 494 aa7□□□□□ -1.29
HMGB1P48-201ENST00000446155 PICK1Q9NRD5 415 aa7□□□□□ -1.29
HMGB1P48-201ENST00000446155 STOML1Q9UBI4 398 aa7□□□□□ -1.29
HMGB1P48-201ENST00000446155 MEIS3P2A8K0S8 358 aa6.99□□□□□ -1.29
HMGB1P48-201ENST00000446155 FGRP09769 529 aa6.99□□□□□ -1.29
HMGB1P48-201ENST00000446155 ADMP35318 185 aa6.99□□□□□ -1.29
HMGB1P48-201ENST00000446155 RNF43Q68DV7 783 aa6.99□□□□□ -1.29
HMGB1P48-201ENST00000446155 SLC6A19Q695T7 634 aa6.99□□□□□ -1.29
HMGB1P48-201ENST00000446155 GK5Q6ZS86 529 aa6.99□□□□□ -1.29
HMGB1P48-201ENST00000446155 ARMCX6Q7L4S7 300 aa6.99□□□□□ -1.29
HMGB1P48-201ENST00000446155 NASPP49321 788 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P48-201ENST00000446155 NFKBIBQ15653 356 aa6.98□□□□□ -1.29
HMGB1P48-201ENST00000446155 CDC37L1Q7L3B6 337 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms