RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 PI4KBQ9UBF8 816 aa17.91■□□□□ 0.46
USE1-202ENST00000445667 ZNF532Q9HCE3 1301 aa17.91■□□□□ 0.46
USE1-202ENST00000445667 MAGEB6P1A0A0J9YX57 407 aa17.9■□□□□ 0.46
USE1-202ENST00000445667 CCDC85CA6NKD9 419 aa17.9■□□□□ 0.46
USE1-202ENST00000445667 USP5P45974 858 aa17.9■□□□□ 0.46
USE1-202ENST00000445667 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
USE1-202ENST00000445667 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
USE1-202ENST00000445667 ZFYVE28Q9HCC9 887 aa17.9■□□□□ 0.46
USE1-202ENST00000445667 TCRBV5S4A2TA0A5A2 114 aa17.89■□□□□ 0.45
USE1-202ENST00000445667 CXCL11O14625 94 aa17.89■□□□□ 0.45
USE1-202ENST00000445667 MOGSQ13724 837 aa17.89■□□□□ 0.45
USE1-202ENST00000445667 TSHZ3Q63HK5 1081 aa17.89■□□□□ 0.45
USE1-202ENST00000445667 TMED8Q6PL24 325 aaPredicted RBP17.89■□□□□ 0.45
USE1-202ENST00000445667 ECHDC1Q9NTX5 307 aa17.89■□□□□ 0.45
USE1-202ENST00000445667 HERC5Q9UII4 1024 aaKnown RBP17.89■□□□□ 0.45
USE1-202ENST00000445667 AFG3L2Q9Y4W6 797 aa17.89■□□□□ 0.45
USE1-202ENST00000445667 CHGBP05060 677 aa17.88■□□□□ 0.45
USE1-202ENST00000445667 CERS3Q8IU89 383 aa17.88■□□□□ 0.45
USE1-202ENST00000445667 FOXP4Q8IVH2 680 aaPredicted RBP17.88■□□□□ 0.45
USE1-202ENST00000445667 CRACR2BQ8N4Y2 399 aaPredicted RBP17.88■□□□□ 0.45
USE1-202ENST00000445667 DNAJC18Q9H819 358 aa17.88■□□□□ 0.45
USE1-202ENST00000445667 CDK5RAP2Q96SN8 1893 aa17.87■□□□□ 0.45
USE1-202ENST00000445667 TRIM75PA6NK02 468 aa17.87■□□□□ 0.45
USE1-202ENST00000445667 PDHXO00330 501 aa17.87■□□□□ 0.45
USE1-202ENST00000445667 CAP2P40123 477 aa17.87■□□□□ 0.45
USE1-202ENST00000445667 SP3Q02447 781 aa17.87■□□□□ 0.45
USE1-202ENST00000445667 ANKRD23Q86SG2 305 aa17.87■□□□□ 0.45
USE1-202ENST00000445667 METTL16Q86W50 562 aaKnown RBP17.87■□□□□ 0.45
USE1-202ENST00000445667 CD99L2Q8TCZ2 262 aa17.87■□□□□ 0.45
USE1-202ENST00000445667 HLA-DOAP06340 250 aa17.86■□□□□ 0.45
USE1-202ENST00000445667 ADD2P35612 726 aa17.86■□□□□ 0.45
USE1-202ENST00000445667 JAG1P78504 1218 aa17.86■□□□□ 0.45
USE1-202ENST00000445667 GPAT2Q6NUI2 795 aa17.86■□□□□ 0.45
USE1-202ENST00000445667 TRIM34Q9BYJ4 488 aa17.86■□□□□ 0.45
USE1-202ENST00000445667 ZCCHC17Q9NP64 241 aaKnown RBP17.86■□□□□ 0.45
USE1-202ENST00000445667 FOCADQ5VW36 1801 aa17.86■□□□□ 0.45
USE1-202ENST00000445667 A0A0G2JLL6 359 aaPredicted RBP17.85■□□□□ 0.45
USE1-202ENST00000445667 SIPA1L1O43166 1804 aa17.85■□□□□ 0.45
USE1-202ENST00000445667 TLR2O60603 784 aa17.85■□□□□ 0.45
USE1-202ENST00000445667 CAP1Q01518 475 aa17.85■□□□□ 0.45
USE1-202ENST00000445667 SHROOM1Q2M3G4 852 aaPredicted RBP17.85■□□□□ 0.45
USE1-202ENST00000445667 GADL1Q6ZQY3 521 aa17.85■□□□□ 0.45
USE1-202ENST00000445667 PRRT2Q7Z6L0 340 aaPredicted RBP17.85■□□□□ 0.45
USE1-202ENST00000445667 LCORLQ8N3X6 602 aa17.85■□□□□ 0.45
USE1-202ENST00000445667 OTUD7AQ8TE49 926 aaPredicted RBP17.85■□□□□ 0.45
USE1-202ENST00000445667 ERO1AQ96HE7 468 aa17.85■□□□□ 0.45
USE1-202ENST00000445667 GPATCH3Q96I76 525 aa17.85■□□□□ 0.45
USE1-202ENST00000445667 CRNKL1Q9BZJ0 848 aaKnown RBP17.85■□□□□ 0.45
USE1-202ENST00000445667 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.85■□□□□ 0.45
USE1-202ENST00000445667 ARMT1Q9H993 441 aa17.85■□□□□ 0.45
USE1-202ENST00000445667 TRIM17Q9Y577 477 aa17.85■□□□□ 0.45
USE1-202ENST00000445667 DOCK1Q14185 1865 aa17.84■□□□□ 0.45
USE1-202ENST00000445667 GDF11O95390 407 aa17.84■□□□□ 0.45
USE1-202ENST00000445667 SPP2Q13103 211 aa17.84■□□□□ 0.45
USE1-202ENST00000445667 PKN2Q16513 984 aaKnown RBP17.84■□□□□ 0.45
USE1-202ENST00000445667 FASTKD5Q7L8L6 764 aaKnown RBP17.84■□□□□ 0.45
USE1-202ENST00000445667 OTOP1Q7RTM1 612 aa17.84■□□□□ 0.45
USE1-202ENST00000445667 EXOC6Q8TAG9 804 aa17.84■□□□□ 0.45
USE1-202ENST00000445667 SDR42E1Q8WUS8 393 aa17.84■□□□□ 0.45
USE1-202ENST00000445667 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
USE1-202ENST00000445667 USP17L5A8MUK1 530 aa17.83■□□□□ 0.44
USE1-202ENST00000445667 MBD4O95243 580 aa17.83■□□□□ 0.44
USE1-202ENST00000445667 POLR3DP05423 398 aaPredicted RBP17.83■□□□□ 0.44
USE1-202ENST00000445667 PLCD1P51178 756 aa17.83■□□□□ 0.44
USE1-202ENST00000445667 ANKRD45Q5TZF3 282 aa17.83■□□□□ 0.44
USE1-202ENST00000445667 TTC6Q86TZ1 520 aa17.83■□□□□ 0.44
USE1-202ENST00000445667 CPA4Q9UI42 421 aa17.83■□□□□ 0.44
USE1-202ENST00000445667 HPS5Q9UPZ3 1129 aa17.83■□□□□ 0.44
USE1-202ENST00000445667 PRKAB2O43741 272 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 ECM2O94769 699 aaPredicted RBP17.82■□□□□ 0.44
USE1-202ENST00000445667 CYP2C8P10632 490 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 EVX2Q03828 476 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
USE1-202ENST00000445667 UBE3CQ15386 1083 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 FBXO46Q6PJ61 603 aaPredicted RBP17.82■□□□□ 0.44
USE1-202ENST00000445667 C17orf99Q6UX52 265 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 ZNF280CQ8ND82 737 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 EFCC1Q9HA90 598 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 DCP1AQ9NPI6 582 aaPredicted RBP17.82■□□□□ 0.44
USE1-202ENST00000445667 MCM9Q9NXL9 1143 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 SERPINB13Q9UIV8 391 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 MYH1P12882 1939 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 PHIPQ8WWQ0 1821 aa17.82■□□□□ 0.44
USE1-202ENST00000445667 ASNSP08243 561 aa17.81■□□□□ 0.44
USE1-202ENST00000445667 ZSCAN25Q6NSZ9 544 aa17.81■□□□□ 0.44
USE1-202ENST00000445667 ARHGAP39Q9C0H5 1083 aa17.81■□□□□ 0.44
USE1-202ENST00000445667 PUS7LQ9H0K6 701 aaKnown RBP17.81■□□□□ 0.44
USE1-202ENST00000445667 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
USE1-202ENST00000445667 TTC41PQ6P2S7 1318 aa17.8■□□□□ 0.44
USE1-202ENST00000445667 HMGCS2P54868 508 aa17.8■□□□□ 0.44
USE1-202ENST00000445667 TATDN1Q6P1N9 297 aa17.8■□□□□ 0.44
USE1-202ENST00000445667 KBTBD3Q8NAB2 608 aa17.8■□□□□ 0.44
USE1-202ENST00000445667 PI4K2BQ8TCG2 481 aa17.8■□□□□ 0.44
USE1-202ENST00000445667 GCC1Q96CN9 775 aa17.8■□□□□ 0.44
USE1-202ENST00000445667 EHD4Q9H223 541 aa17.8■□□□□ 0.44
USE1-202ENST00000445667 AS3MTQ9HBK9 375 aa17.8■□□□□ 0.44
USE1-202ENST00000445667 ATAD5Q96QE3 1844 aa17.79■□□□□ 0.44
USE1-202ENST00000445667 ADGRA2Q96PE1 1338 aa17.79■□□□□ 0.44
USE1-202ENST00000445667 GH2P01242 217 aa17.79■□□□□ 0.44
USE1-202ENST00000445667 CYP2D6P10635 497 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms