RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 TNKSO95271 1327 aa21.96■■□□□ 1.11
SEMA3D-202ENST00000444867 FAM205AQ6ZU69 1335 aa21.96■■□□□ 1.11
SEMA3D-202ENST00000444867 FMNL1O95466 1100 aaPredicted RBP21.96■■□□□ 1.11
SEMA3D-202ENST00000444867 RXRAP19793 462 aa21.96■■□□□ 1.11
SEMA3D-202ENST00000444867 SSRP1Q08945 709 aaKnown RBP21.96■■□□□ 1.11
SEMA3D-202ENST00000444867 EZH2Q15910 746 aaKnown RBP21.96■■□□□ 1.11
SEMA3D-202ENST00000444867 SLF2Q8IX21 1173 aa21.96■■□□□ 1.11
SEMA3D-202ENST00000444867 ZNF654Q8IZM8 581 aa21.96■■□□□ 1.11
SEMA3D-202ENST00000444867 ZKSCAN3Q9BRR0 538 aa21.96■■□□□ 1.11
SEMA3D-202ENST00000444867 C6orf229H3BNL8 230 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 PPFIA3O75145 1194 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 MMP10P09238 476 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 PDE4BQ07343 736 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 STK11IPQ8N1F8 1099 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 MYH6P13533 1939 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 CYP2D7A0A087X1C5 515 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 MASTLQ96GX5 879 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 MYL10Q9BUA6 226 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 COA1Q9GZY4 146 aa21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 DDX19AQ9NUU7 478 aaKnown RBP21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 MKRN1Q9UHC7 482 aaKnown RBP21.95■■□□□ 1.1
SEMA3D-202ENST00000444867 RANBP6O60518 1105 aaKnown RBP21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 CALM1P0DP23 149 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 CALM2P0DP24 149 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 CALM3P0DP25 149 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 USP5P45974 858 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 KIF23Q02241 960 aaPredicted RBP21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 AMOTL1Q8IY63 956 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 CCDC144CPQ8IYA2 1237 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 TRIM22Q8IYM9 498 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 FAM163AQ96GL9 167 aaPredicted RBP21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 PGBD1Q96JS3 809 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 CAMKK2Q96RR4 588 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 USP28Q96RU2 1077 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 RTEL1Q9NZ71 1219 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 ROBO3Q96MS0 1386 aa21.94■■□□□ 1.1
SEMA3D-202ENST00000444867 PLCG2P16885 1265 aa21.93■■□□□ 1.1
SEMA3D-202ENST00000444867 CCDC173Q0VFZ6 552 aa21.93■■□□□ 1.1
SEMA3D-202ENST00000444867 TRIM29Q14134 588 aa21.93■■□□□ 1.1
SEMA3D-202ENST00000444867 ENAHQ8N8S7 591 aaPredicted RBP21.93■■□□□ 1.1
SEMA3D-202ENST00000444867 FANCBQ8NB91 859 aa21.93■■□□□ 1.1
SEMA3D-202ENST00000444867 RTFDC1Q9BY42 306 aaPredicted RBP21.93■■□□□ 1.1
SEMA3D-202ENST00000444867 TMX4Q9H1E5 349 aaPredicted RBP21.93■■□□□ 1.1
SEMA3D-202ENST00000444867 MCM9Q9NXL9 1143 aa21.93■■□□□ 1.1
SEMA3D-202ENST00000444867 SUGT1Q9Y2Z0 365 aa21.93■■□□□ 1.1
SEMA3D-202ENST00000444867 LIG1P18858 919 aa21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 GRIK5Q16478 980 aa21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 IFIT1BQ5T764 474 aaKnown RBP21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 OTUD7BQ6GQQ9 843 aa21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 MPNDQ8N594 471 aa21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 SH3RF3Q8TEJ3 882 aaPredicted RBP21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 PHKBQ93100 1093 aa21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 SLC26A6Q9BXS9 759 aa21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 DDX60LQ5H9U9 1706 aaKnown RBP21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 FOCADQ5VW36 1801 aa21.92■■□□□ 1.1
SEMA3D-202ENST00000444867 GPR75-ASB3A0A0A6YYF3 556 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 DDAH1O94760 285 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 DIXDC1Q155Q3 683 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 C12orf60Q5U649 245 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 KRT40Q6A162 431 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 CATIPQ7Z7H3 387 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 BICD2Q8TD16 824 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 NUP62CLQ9H1M0 184 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 POLR3EQ9NVU0 708 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 RBM28Q9NW13 759 aaKnown RBP21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 SMIM22K7EJ46 135 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 DEXIO95424 95 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 YEATS4O95619 227 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 TPRNQ4KMQ1 711 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 MFSD14BQ5SR56 506 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 MYSM1Q5VVJ2 828 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 CRACR2BQ8N4Y2 399 aaPredicted RBP21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 PPP1R9BQ96SB3 815 aa21.91■■□□□ 1.1
SEMA3D-202ENST00000444867 GAKO14976 1311 aa21.9■■□□□ 1.1
SEMA3D-202ENST00000444867 NBPF11Q86T75 865 aa21.9■■□□□ 1.1
SEMA3D-202ENST00000444867 PRDM1O75626 825 aa21.89■■□□□ 1.09
SEMA3D-202ENST00000444867 CYP2D6P10635 497 aa21.89■■□□□ 1.09
SEMA3D-202ENST00000444867 CCDC178Q5BJE1 867 aa21.89■■□□□ 1.09
SEMA3D-202ENST00000444867 STYK1Q6J9G0 422 aa21.89■■□□□ 1.09
SEMA3D-202ENST00000444867 KCNG4Q8TDN1 519 aa21.89■■□□□ 1.09
SEMA3D-202ENST00000444867 NUP133Q8WUM0 1156 aa21.89■■□□□ 1.09
SEMA3D-202ENST00000444867 RNF26Q9BY78 433 aaPredicted RBP21.89■■□□□ 1.09
SEMA3D-202ENST00000444867 ZC3H12CQ9C0D7 883 aaKnown RBP21.89■■□□□ 1.09
SEMA3D-202ENST00000444867 USP17L8P0C7I0 530 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 BTDP43251 543 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 CEBPZQ03701 1054 aaKnown RBP21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 MAP3K11Q16584 847 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 UVSSAQ2YD98 709 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 DPP8Q6V1X1 898 aaPredicted RBP21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 AIFM3Q96NN9 605 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 FUCA2Q9BTY2 467 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 CLSTN2Q9H4D0 955 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 DACT1Q9NYF0 836 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 MYH1P12882 1939 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 KIF28PB7ZC32 967 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 U2AF2P26368 475 aaKnown RBP eCLIP21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 SLC15A2Q16348 729 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 LINC00301Q8NCQ3 95 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 EYA3Q99504 573 aa21.88■■□□□ 1.09
SEMA3D-202ENST00000444867 GJB4Q9NTQ9 266 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms