RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 PHIPQ8WWQ0 1821 aa27.08■■□□□ 1.93
LMBR1-211ENST00000444719 PDE6AP16499 860 aa27.07■■□□□ 1.92
LMBR1-211ENST00000444719 SLC4A8Q2Y0W8 1093 aa27.07■■□□□ 1.92
LMBR1-211ENST00000444719 CCDC84Q86UT8 332 aaPredicted RBP27.07■■□□□ 1.92
LMBR1-211ENST00000444719 ZFYVE28Q9HCC9 887 aa27.07■■□□□ 1.92
LMBR1-211ENST00000444719 PAG1Q9NWQ8 432 aa27.07■■□□□ 1.92
LMBR1-211ENST00000444719 PI4KBQ9UBF8 816 aa27.07■■□□□ 1.92
LMBR1-211ENST00000444719 USP5P45974 858 aa27.06■■□□□ 1.92
LMBR1-211ENST00000444719 DHX36Q9H2U1 1008 aaKnown RBP27.06■■□□□ 1.92
LMBR1-211ENST00000444719 HAUS7Q99871 368 aa27.05■■□□□ 1.92
LMBR1-211ENST00000444719 PTPRFP10586 1907 aa27.04■■□□□ 1.92
LMBR1-211ENST00000444719 MYH7P12883 1935 aa27.04■■□□□ 1.92
LMBR1-211ENST00000444719 MAGEB6P1A0A0J9YX57 407 aa27.04■■□□□ 1.92
LMBR1-211ENST00000444719 CXCL11O14625 94 aa27.04■■□□□ 1.92
LMBR1-211ENST00000444719 RRP1BQ14684 758 aaKnown RBP27.04■■□□□ 1.92
LMBR1-211ENST00000444719 CD99L2Q8TCZ2 262 aa27.04■■□□□ 1.92
LMBR1-211ENST00000444719 HERC5Q9UII4 1024 aaKnown RBP27.04■■□□□ 1.92
LMBR1-211ENST00000444719 AFG3L2Q9Y4W6 797 aa27.04■■□□□ 1.92
LMBR1-211ENST00000444719 ZNF532Q9HCE3 1301 aa27.04■■□□□ 1.92
LMBR1-211ENST00000444719 SP3Q02447 781 aa27.03■■□□□ 1.92
LMBR1-211ENST00000444719 SLFNL1Q499Z3 407 aa27.03■■□□□ 1.92
LMBR1-211ENST00000444719 TMED8Q6PL24 325 aaPredicted RBP27.03■■□□□ 1.92
LMBR1-211ENST00000444719 CERS3Q8IU89 383 aa27.03■■□□□ 1.92
LMBR1-211ENST00000444719 CRACR2BQ8N4Y2 399 aaPredicted RBP27.03■■□□□ 1.92
LMBR1-211ENST00000444719 TRIM34Q9BYJ4 488 aa27.03■■□□□ 1.92
LMBR1-211ENST00000444719 MOGSQ13724 837 aa27.02■■□□□ 1.92
LMBR1-211ENST00000444719 RIOK1Q9BRS2 568 aaKnown RBP27.02■■□□□ 1.92
LMBR1-211ENST00000444719 TCRBV5S4A2TA0A5A2 114 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 TRIM75PA6NK02 468 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 PDHXO00330 501 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 HLA-DOAP06340 250 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 CAP2P40123 477 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 PKN2Q16513 984 aaKnown RBP27.01■■□□□ 1.91
LMBR1-211ENST00000444719 TSHZ3Q63HK5 1081 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 ANKRD23Q86SG2 305 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 FOXP4Q8IVH2 680 aaPredicted RBP27.01■■□□□ 1.91
LMBR1-211ENST00000444719 ERO1AQ96HE7 468 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 ZCCHC17Q9NP64 241 aaKnown RBP27.01■■□□□ 1.91
LMBR1-211ENST00000444719 ECHDC1Q9NTX5 307 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 TRIM17Q9Y577 477 aa27.01■■□□□ 1.91
LMBR1-211ENST00000444719 GADL1Q6ZQY3 521 aa27■■□□□ 1.91
LMBR1-211ENST00000444719 DNAJC18Q9H819 358 aa27■■□□□ 1.91
LMBR1-211ENST00000444719 A0A0G2JLL6 359 aaPredicted RBP26.99■■□□□ 1.91
LMBR1-211ENST00000444719 TLR2O60603 784 aa26.99■■□□□ 1.91
LMBR1-211ENST00000444719 CHGBP05060 677 aa26.99■■□□□ 1.91
LMBR1-211ENST00000444719 CAP1Q01518 475 aa26.99■■□□□ 1.91
LMBR1-211ENST00000444719 GPAT2Q6NUI2 795 aa26.99■■□□□ 1.91
LMBR1-211ENST00000444719 OTOP1Q7RTM1 612 aa26.99■■□□□ 1.91
LMBR1-211ENST00000444719 PRRT2Q7Z6L0 340 aaPredicted RBP26.99■■□□□ 1.91
LMBR1-211ENST00000444719 NAV1Q8NEY1 1877 aa26.98■■□□□ 1.91
LMBR1-211ENST00000444719 ADD2P35612 726 aa26.98■■□□□ 1.91
LMBR1-211ENST00000444719 HPS5Q9UPZ3 1129 aa26.98■■□□□ 1.91
LMBR1-211ENST00000444719 JAG1P78504 1218 aa26.97■■□□□ 1.91
LMBR1-211ENST00000444719 SPP2Q13103 211 aa26.97■■□□□ 1.91
LMBR1-211ENST00000444719 SHROOM1Q2M3G4 852 aaPredicted RBP26.97■■□□□ 1.91
LMBR1-211ENST00000444719 FBXO46Q6PJ61 603 aaPredicted RBP26.97■■□□□ 1.91
LMBR1-211ENST00000444719 FASTKD5Q7L8L6 764 aaKnown RBP26.97■■□□□ 1.91
LMBR1-211ENST00000444719 METTL16Q86W50 562 aaKnown RBP26.97■■□□□ 1.91
LMBR1-211ENST00000444719 LCORLQ8N3X6 602 aa26.97■■□□□ 1.91
LMBR1-211ENST00000444719 GPATCH3Q96I76 525 aa26.97■■□□□ 1.91
LMBR1-211ENST00000444719 CRNKL1Q9BZJ0 848 aaKnown RBP26.97■■□□□ 1.91
LMBR1-211ENST00000444719 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.97■■□□□ 1.912e-6■■■□□ 16.9
LMBR1-211ENST00000444719 ZSWIM8A7E2V4 1837 aa26.97■■□□□ 1.91
LMBR1-211ENST00000444719 ECM2O94769 699 aaPredicted RBP26.96■■□□□ 1.91
LMBR1-211ENST00000444719 GDF11O95390 407 aa26.96■■□□□ 1.91
LMBR1-211ENST00000444719 ARMT1Q9H993 441 aa26.96■■□□□ 1.91
LMBR1-211ENST00000444719 EFCC1Q9HA90 598 aa26.96■■□□□ 1.91
LMBR1-211ENST00000444719 CPA4Q9UI42 421 aa26.96■■□□□ 1.91
LMBR1-211ENST00000444719 USP17L5A8MUK1 530 aa26.95■■□□□ 1.9
LMBR1-211ENST00000444719 SDR42E1Q8WUS8 393 aa26.95■■□□□ 1.9
LMBR1-211ENST00000444719 BAZ2AQ9UIF9 1905 aaKnown RBP26.94■■□□□ 1.9
LMBR1-211ENST00000444719 POLR3DP05423 398 aaPredicted RBP26.94■■□□□ 1.9
LMBR1-211ENST00000444719 CYP2C8P10632 490 aa26.94■■□□□ 1.9
LMBR1-211ENST00000444719 PLCD1P51178 756 aa26.94■■□□□ 1.9
LMBR1-211ENST00000444719 TTC6Q86TZ1 520 aa26.94■■□□□ 1.9
LMBR1-211ENST00000444719 ZNF280CQ8ND82 737 aa26.94■■□□□ 1.9
LMBR1-211ENST00000444719 OTUD7AQ8TE49 926 aaPredicted RBP26.94■■□□□ 1.9
LMBR1-211ENST00000444719 MBD4O95243 580 aa26.93■■□□□ 1.9
LMBR1-211ENST00000444719 C17orf99Q6UX52 265 aa26.93■■□□□ 1.9
LMBR1-211ENST00000444719 MCM9Q9NXL9 1143 aa26.93■■□□□ 1.9
LMBR1-211ENST00000444719 SERPINB13Q9UIV8 391 aa26.93■■□□□ 1.9
LMBR1-211ENST00000444719 DDX60LQ5H9U9 1706 aaKnown RBP26.93■■□□□ 1.9
LMBR1-211ENST00000444719 PRKAB2O43741 272 aa26.92■■□□□ 1.9
LMBR1-211ENST00000444719 ASNSP08243 561 aa26.92■■□□□ 1.9
LMBR1-211ENST00000444719 ANKRD45Q5TZF3 282 aa26.92■■□□□ 1.9
LMBR1-211ENST00000444719 PARK7Q99497 189 aaKnown RBP26.92■■□□□ 1.9
LMBR1-211ENST00000444719 ARHGAP39Q9C0H5 1083 aa26.92■■□□□ 1.9
LMBR1-211ENST00000444719 HMGCS2P54868 508 aa26.91■■□□□ 1.9
LMBR1-211ENST00000444719 EVX2Q03828 476 aa26.91■■□□□ 1.9
LMBR1-211ENST00000444719 UBE3CQ15386 1083 aa26.91■■□□□ 1.9
LMBR1-211ENST00000444719 ZSCAN25Q6NSZ9 544 aa26.91■■□□□ 1.9
LMBR1-211ENST00000444719 AS3MTQ9HBK9 375 aa26.91■■□□□ 1.9
LMBR1-211ENST00000444719 DCP1AQ9NPI6 582 aaPredicted RBP26.91■■□□□ 1.9
LMBR1-211ENST00000444719 SUPT16HQ9Y5B9 1047 aaKnown RBP26.91■■□□□ 1.9
LMBR1-211ENST00000444719 LACTBP83111 547 aaPredicted RBP26.9■■□□□ 1.9
LMBR1-211ENST00000444719 TREML2Q5T2D2 321 aa26.9■■□□□ 1.9
LMBR1-211ENST00000444719 TBC1D2Q9BYX2 928 aa26.9■■□□□ 1.9
LMBR1-211ENST00000444719 EHD4Q9H223 541 aa26.9■■□□□ 1.9
LMBR1-211ENST00000444719 ZBTB47Q9UFB7 747 aaPredicted RBP26.9■■□□□ 1.9
LMBR1-211ENST00000444719 ZBTB21Q9ULJ3 1066 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms