RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 HHIPL2Q6UWX4 724 aa13.06□□□□□ -0.32
HDAC8-215ENST00000444609 TBC1D22AQ8WUA7 517 aa13.06□□□□□ -0.32
HDAC8-215ENST00000444609 PHOX2BQ99453 314 aa13.06□□□□□ -0.32
HDAC8-215ENST00000444609 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC8-215ENST00000444609 COG5Q9UP83 839 aa13.06□□□□□ -0.32
HDAC8-215ENST00000444609 MAP3K2Q9Y2U5 619 aa13.06□□□□□ -0.32
HDAC8-215ENST00000444609 DDX58O95786 925 aaKnown RBP13.05□□□□□ -0.32
HDAC8-215ENST00000444609 CLTBP09497 229 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 CNGA1P29973 690 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 MAPK4P31152 587 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 NFIAQ12857 509 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 GPRC5AQ8NFJ5 357 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 APBA2Q99767 749 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 MSRAQ9UJ68 235 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 UTYO14607 1347 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 MYBBP1AQ9BQG0 1328 aaKnown RBP13.05□□□□□ -0.32
HDAC8-215ENST00000444609 ATRNL1Q5VV63 1379 aa13.05□□□□□ -0.32
HDAC8-215ENST00000444609 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 KBTBD13C9JR72 458 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 PLIN1O60240 522 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 CTNND1O60716 968 aaKnown RBP13.04□□□□□ -0.32
HDAC8-215ENST00000444609 ADCYAP1R1P41586 468 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 MAP3K10Q02779 954 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 LMOD3Q0VAK6 560 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 RAB30Q15771 203 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 CCDC84Q86UT8 332 aaPredicted RBP13.04□□□□□ -0.32
HDAC8-215ENST00000444609 ZFPM1Q8IX07 1006 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 FLRT1Q9NZU1 646 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 FAM198AQ9UFP1 575 aa13.04□□□□□ -0.32
HDAC8-215ENST00000444609 LAS1LQ9Y4W2 734 aaKnown RBP13.04□□□□□ -0.32
HDAC8-215ENST00000444609 LRRFIP2Q9Y608 721 aaKnown RBP13.04□□□□□ -0.32
HDAC8-215ENST00000444609 NEURL1BA8MQ27 555 aa13.03□□□□□ -0.32
HDAC8-215ENST00000444609 PEX10O60683 326 aa13.03□□□□□ -0.32
HDAC8-215ENST00000444609 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
HDAC8-215ENST00000444609 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
HDAC8-215ENST00000444609 CWF19L2Q2TBE0 894 aaKnown RBP13.03□□□□□ -0.32
HDAC8-215ENST00000444609 CDC42EP5Q6NZY7 148 aa13.03□□□□□ -0.32
HDAC8-215ENST00000444609 GPR142Q7Z601 462 aa13.03□□□□□ -0.32
HDAC8-215ENST00000444609 EDC3Q96F86 508 aaKnown RBP13.03□□□□□ -0.32
HDAC8-215ENST00000444609 SLC28A3Q9HAS3 691 aa13.03□□□□□ -0.32
HDAC8-215ENST00000444609 TXNRD2Q9NNW7 524 aa13.03□□□□□ -0.32
HDAC8-215ENST00000444609 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.03□□□□□ -0.32
HDAC8-215ENST00000444609 POU3F3P20264 500 aaPredicted RBP13.02□□□□□ -0.33
HDAC8-215ENST00000444609 SPP2Q13103 211 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 UBE4AQ14139 1066 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 KSR2Q6VAB6 950 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 C16orf59Q7L2K0 433 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 TRPV1Q8NER1 839 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 FERMT2Q96AC1 680 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 NKX2-4Q9H2Z4 354 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 SUGT1Q9Y2Z0 365 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 MAST3O60307 1309 aa13.02□□□□□ -0.33
HDAC8-215ENST00000444609 WDFY4Q6ZS81 3184 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 PI4KAP2A4QPH2 592 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 ALADP13716 330 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
HDAC8-215ENST00000444609 CASP7P55210 303 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 IFIT5Q13325 482 aaKnown RBP13.01□□□□□ -0.33
HDAC8-215ENST00000444609 Q3C1V9 767 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 TMEM240Q5SV17 173 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 FBXO33Q7Z6M2 555 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 PI4KAP1Q8N8J0 262 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 PORCNQ9H237 461 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 TMEM39AQ9NV64 488 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 RBPJLQ9UBG7 517 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
HDAC8-215ENST00000444609 USP34Q70CQ2 3546 aa13.01□□□□□ -0.33
HDAC8-215ENST00000444609 REV3LO60673 3130 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 RLFQ13129 1914 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 HMGCS2P54868 508 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 NEXNQ0ZGT2 675 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 GCKRQ14397 625 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 CCDC174Q6PII3 467 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 CCAR1Q8IX12 1150 aaKnown RBP13□□□□□ -0.33
HDAC8-215ENST00000444609 ZNF280CQ8ND82 737 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 HLA-CQ95604 372 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 YBX2Q9Y2T7 364 aaKnown RBP13□□□□□ -0.33
HDAC8-215ENST00000444609 MTCH2Q9Y6C9 303 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 ZDBF2Q9HCK1 2354 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 MYO9BQ13459 2157 aa13□□□□□ -0.33
HDAC8-215ENST00000444609 CFAP54Q96N23 3096 aa12.99□□□□□ -0.33
HDAC8-215ENST00000444609 SLURP2P0DP57 97 aa12.99□□□□□ -0.33
HDAC8-215ENST00000444609 CYP2C19P33261 490 aa12.99□□□□□ -0.33
HDAC8-215ENST00000444609 ATP2B2Q01814 1243 aa12.99□□□□□ -0.33
HDAC8-215ENST00000444609 SH3D19Q5HYK7 790 aa12.99□□□□□ -0.33
HDAC8-215ENST00000444609 LDHAL6AQ6ZMR3 332 aa12.99□□□□□ -0.33
HDAC8-215ENST00000444609 GJD3Q8N144 294 aa12.99□□□□□ -0.33
HDAC8-215ENST00000444609 SLC44A5Q8NCS7 719 aa12.99□□□□□ -0.33
HDAC8-215ENST00000444609 AK9Q5TCS8 1911 aa12.99□□□□□ -0.33
HDAC8-215ENST00000444609 TIMP1P01033 207 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 IGHA2P01877 340 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-215ENST00000444609 CYBAP13498 195 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 HOXA7P31268 230 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-215ENST00000444609 HERVK_113P62684 666 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 ERVK-9P63128 1117 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 ERVK-24P63145 666 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms