RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 MIGA1Q8NAN2 632 aa13.29□□□□□ -0.28
SF3A1-203ENST00000444440 TGFBRAP1Q8WUH2 860 aa13.29□□□□□ -0.28
SF3A1-203ENST00000444440 BCL11AQ9H165 835 aa13.29□□□□□ -0.28
SF3A1-203ENST00000444440 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
SF3A1-203ENST00000444440 AFG3L2Q9Y4W6 797 aa13.29□□□□□ -0.28
SF3A1-203ENST00000444440 SMARCA5O60264 1052 aaPredicted RBP13.28□□□□□ -0.28
SF3A1-203ENST00000444440 TBC1D12O60347 775 aa13.28□□□□□ -0.28
SF3A1-203ENST00000444440 TLR2O60603 784 aa13.28□□□□□ -0.28
SF3A1-203ENST00000444440 MAP4K4O95819 1239 aaPredicted RBP13.28□□□□□ -0.28
SF3A1-203ENST00000444440 PKN2Q16513 984 aaKnown RBP13.28□□□□□ -0.28
SF3A1-203ENST00000444440 SLFNL1Q499Z3 407 aa13.28□□□□□ -0.28
SF3A1-203ENST00000444440 HSP90AB4PQ58FF6 505 aa13.28□□□□□ -0.28
SF3A1-203ENST00000444440 MAGEB6Q8N7X4 407 aa13.28□□□□□ -0.28
SF3A1-203ENST00000444440 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
SF3A1-203ENST00000444440 ERO1AQ96HE7 468 aa13.28□□□□□ -0.28
SF3A1-203ENST00000444440 ZHX2Q9Y6X8 837 aa13.28□□□□□ -0.28
SF3A1-203ENST00000444440 KIAA0100Q14667 2235 aaKnown RBP13.28□□□□□ -0.28
SF3A1-203ENST00000444440 PARP14Q460N5 1801 aa13.27□□□□□ -0.28
SF3A1-203ENST00000444440 A0A0G2JLL6 359 aaPredicted RBP13.27□□□□□ -0.29
SF3A1-203ENST00000444440 PDHXO00330 501 aa13.27□□□□□ -0.29
SF3A1-203ENST00000444440 CTNND1O60716 968 aaKnown RBP13.27□□□□□ -0.29
SF3A1-203ENST00000444440 HMMRO75330 724 aa13.27□□□□□ -0.29
SF3A1-203ENST00000444440 ECM2O94769 699 aaPredicted RBP13.27□□□□□ -0.29
SF3A1-203ENST00000444440 CHGBP05060 677 aa13.27□□□□□ -0.29
SF3A1-203ENST00000444440 PRRT2Q7Z6L0 340 aaPredicted RBP13.27□□□□□ -0.29
SF3A1-203ENST00000444440 ANKRD23Q86SG2 305 aa13.27□□□□□ -0.29
SF3A1-203ENST00000444440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.27□□□□□ -0.29
SF3A1-203ENST00000444440 ZCCHC17Q9NP64 241 aaKnown RBP13.27□□□□□ -0.29
SF3A1-203ENST00000444440 SAP30BPQ9UHR5 308 aaKnown RBP13.27□□□□□ -0.29
SF3A1-203ENST00000444440 CPA4Q9UI42 421 aa13.27□□□□□ -0.29
SF3A1-203ENST00000444440 PALD1Q9ULE6 856 aa13.27□□□□□ -0.29
SF3A1-203ENST00000444440 PTPN22Q9Y2R2 807 aa13.27□□□□□ -0.29
SF3A1-203ENST00000444440 CXCL11O14625 94 aa13.26□□□□□ -0.29
SF3A1-203ENST00000444440 EVX2Q03828 476 aa13.26□□□□□ -0.29
SF3A1-203ENST00000444440 C17orf99Q6UX52 265 aa13.26□□□□□ -0.29
SF3A1-203ENST00000444440 CLASRPQ8N2M8 674 aaKnown RBP13.26□□□□□ -0.29
SF3A1-203ENST00000444440 RIOK1Q9BRS2 568 aaKnown RBP13.26□□□□□ -0.29
SF3A1-203ENST00000444440 NOL10Q9BSC4 688 aaKnown RBP13.26□□□□□ -0.29
SF3A1-203ENST00000444440 EFCC1Q9HA90 598 aa13.26□□□□□ -0.29
SF3A1-203ENST00000444440 PICK1Q9NRD5 415 aa13.26□□□□□ -0.29
SF3A1-203ENST00000444440 TCRBV5S4A2TA0A5A2 114 aa13.25□□□□□ -0.29
SF3A1-203ENST00000444440 TRIM75PA6NK02 468 aa13.25□□□□□ -0.29
SF3A1-203ENST00000444440 GOLIM4O00461 696 aa13.25□□□□□ -0.29
SF3A1-203ENST00000444440 RAB11FIP3O75154 756 aa13.25□□□□□ -0.29
SF3A1-203ENST00000444440 BAG3O95817 575 aa13.25□□□□□ -0.29
SF3A1-203ENST00000444440 CYP2C8P10632 490 aa13.25□□□□□ -0.29
SF3A1-203ENST00000444440 CAP2P40123 477 aa13.25□□□□□ -0.29
SF3A1-203ENST00000444440 LACTBP83111 547 aaPredicted RBP13.25□□□□□ -0.29
SF3A1-203ENST00000444440 METTL16Q86W50 562 aaKnown RBP13.25□□□□□ -0.29
SF3A1-203ENST00000444440 DNAJC2Q99543 621 aaKnown RBP13.25□□□□□ -0.29
SF3A1-203ENST00000444440 PDE4DIPQ5VU43 2346 aa13.25□□□□□ -0.29
SF3A1-203ENST00000444440 RLFQ13129 1914 aa13.25□□□□□ -0.29
SF3A1-203ENST00000444440 IFIT2P09913 472 aaKnown RBP13.24□□□□□ -0.29
SF3A1-203ENST00000444440 PDE6AP16499 860 aa13.24□□□□□ -0.29
SF3A1-203ENST00000444440 PLCG2P16885 1265 aa13.24□□□□□ -0.29
SF3A1-203ENST00000444440 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
SF3A1-203ENST00000444440 TREML2Q5T2D2 321 aa13.24□□□□□ -0.29
SF3A1-203ENST00000444440 GADL1Q6ZQY3 521 aa13.24□□□□□ -0.29
SF3A1-203ENST00000444440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
SF3A1-203ENST00000444440 BOLA2Q9H3K6 86 aa13.24□□□□□ -0.29
SF3A1-203ENST00000444440 PI4KBQ9UBF8 816 aa13.24□□□□□ -0.29
SF3A1-203ENST00000444440 PTCH2Q9Y6C5 1203 aa13.24□□□□□ -0.29
SF3A1-203ENST00000444440 COL11A1P12107 1806 aaPredicted RBP13.23□□□□□ -0.29
SF3A1-203ENST00000444440 ZNF532Q9HCE3 1301 aa13.23□□□□□ -0.29
SF3A1-203ENST00000444440 GDF11O95390 407 aa13.23□□□□□ -0.29
SF3A1-203ENST00000444440 BCRP11274 1271 aa13.23□□□□□ -0.29
SF3A1-203ENST00000444440 MAP3K12Q12852 859 aa13.23□□□□□ -0.29
SF3A1-203ENST00000444440 YTHDC1Q96MU7 727 aaKnown RBP13.23□□□□□ -0.29
SF3A1-203ENST00000444440 DHX36Q9H2U1 1008 aaKnown RBP13.23□□□□□ -0.29
SF3A1-203ENST00000444440 HERC5Q9UII4 1024 aaKnown RBP13.23□□□□□ -0.29
SF3A1-203ENST00000444440 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
SF3A1-203ENST00000444440 GREB1LQ9C091 1923 aaPredicted RBP13.23□□□□□ -0.29
SF3A1-203ENST00000444440 POTEFA5A3E0 1075 aa13.22□□□□□ -0.29
SF3A1-203ENST00000444440 IGSF3O75054 1194 aa13.22□□□□□ -0.29
SF3A1-203ENST00000444440 ATP5JP18859 108 aa13.22□□□□□ -0.29
SF3A1-203ENST00000444440 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
SF3A1-203ENST00000444440 SPP2Q13103 211 aa13.22□□□□□ -0.29
SF3A1-203ENST00000444440 SLC9C2Q5TAH2 1124 aa13.22□□□□□ -0.29
SF3A1-203ENST00000444440 LCORLQ8N3X6 602 aa13.22□□□□□ -0.29
SF3A1-203ENST00000444440 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
SF3A1-203ENST00000444440 LRRCC1Q9C099 1032 aa13.22□□□□□ -0.29
SF3A1-203ENST00000444440 CHMP4BQ9H444 224 aaKnown RBP13.22□□□□□ -0.29
SF3A1-203ENST00000444440 MYH4Q9Y623 1939 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 MAGEB6P1A0A0J9YX57 407 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 SMIM22K7EJ46 135 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 USP5P45974 858 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 PLCD1P51178 756 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 HMGCS2P54868 508 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.29
SF3A1-203ENST00000444440 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
SF3A1-203ENST00000444440 ZNF280CQ8ND82 737 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 ARMC5Q96C12 935 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 HAUS7Q99871 368 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 DCTPP1Q9H773 170 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 PAG1Q9NWQ8 432 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 AGTPBP1Q9UPW5 1226 aa13.21□□□□□ -0.29
SF3A1-203ENST00000444440 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
SF3A1-203ENST00000444440 OSBPP22059 807 aa13.2□□□□□ -0.3
SF3A1-203ENST00000444440 ADD2P35612 726 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms