RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 CCDC144CPQ8IYA2 1237 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 ZSCAN10Q96SZ4 725 aaPredicted RBP17.1■□□□□ 0.33
LINC00299-202ENST00000442956 MTFR1LQ9H019 292 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 SAP30BPQ9UHR5 308 aaKnown RBP17.1■□□□□ 0.33
LINC00299-202ENST00000442956 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 FDPSP14324 419 aaKnown RBP17.09■□□□□ 0.33
LINC00299-202ENST00000442956 POLD1P28340 1107 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 SCNN1DP51172 638 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 GSE1Q14687 1217 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 SEC23AQ15436 765 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 GRIPAP1Q4V328 841 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 IQCA1Q86XH1 822 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 GZF1Q9H116 711 aaPredicted RBP17.09■□□□□ 0.33
LINC00299-202ENST00000442956 DDX49Q9Y6V7 483 aaKnown RBP17.09■□□□□ 0.33
LINC00299-202ENST00000442956 PPIP5K2O43314 1243 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 CDC27P30260 824 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 R3HDM1Q15032 1099 aaKnown RBP17.09■□□□□ 0.33
LINC00299-202ENST00000442956 DACT2Q5SW24 774 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 RTKN2Q8IZC4 609 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 ENAHQ8N8S7 591 aaPredicted RBP17.09■□□□□ 0.33
LINC00299-202ENST00000442956 GDPD2Q9HCC8 539 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 FLT1P17948 1338 aa17.09■□□□□ 0.33
LINC00299-202ENST00000442956 POLR3DP05423 398 aaPredicted RBP17.08■□□□□ 0.33
LINC00299-202ENST00000442956 FOSBP53539 338 aa17.08■□□□□ 0.33
LINC00299-202ENST00000442956 DYNLL2Q96FJ2 89 aa17.08■□□□□ 0.33
LINC00299-202ENST00000442956 ORC3Q9UBD5 711 aaPredicted RBP17.08■□□□□ 0.33
LINC00299-202ENST00000442956 USP17L3A6NCW0 530 aa17.08■□□□□ 0.32
LINC00299-202ENST00000442956 USP17L4A6NCW7 530 aa17.08■□□□□ 0.32
LINC00299-202ENST00000442956 PLCD1P51178 756 aa17.08■□□□□ 0.32
LINC00299-202ENST00000442956 FAM47AQ5JRC9 791 aa17.08■□□□□ 0.32
LINC00299-202ENST00000442956 CPLX2Q6PUV4 134 aaKnown RBP17.08■□□□□ 0.32
LINC00299-202ENST00000442956 USP17L1Q7RTZ2 530 aa17.08■□□□□ 0.32
LINC00299-202ENST00000442956 TEKT1Q969V4 418 aa17.08■□□□□ 0.32
LINC00299-202ENST00000442956 FAM217BQ9NTX9 383 aaPredicted RBP17.08■□□□□ 0.32
LINC00299-202ENST00000442956 CNPY2Q9Y2B0 182 aa17.08■□□□□ 0.32
LINC00299-202ENST00000442956 ROBO3Q96MS0 1386 aa17.08■□□□□ 0.32
LINC00299-202ENST00000442956 CDKL5O76039 1030 aa17.07■□□□□ 0.32
LINC00299-202ENST00000442956 NCLP19338 710 aaKnown RBP17.07■□□□□ 0.32
LINC00299-202ENST00000442956 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
LINC00299-202ENST00000442956 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
LINC00299-202ENST00000442956 KLHL40Q2TBA0 621 aa17.07■□□□□ 0.32
LINC00299-202ENST00000442956 HHIPL2Q6UWX4 724 aa17.07■□□□□ 0.32
LINC00299-202ENST00000442956 TGFB2P61812 414 aa17.07■□□□□ 0.32
LINC00299-202ENST00000442956 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
LINC00299-202ENST00000442956 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
LINC00299-202ENST00000442956 TSPY2A6NKD2 308 aa17.06■□□□□ 0.32
LINC00299-202ENST00000442956 IFIT1BQ5T764 474 aaKnown RBP17.06■□□□□ 0.32
LINC00299-202ENST00000442956 PSMD1Q99460 953 aa17.06■□□□□ 0.32
LINC00299-202ENST00000442956 MKNK2Q9HBH9 465 aa17.06■□□□□ 0.32
LINC00299-202ENST00000442956 DLEC1Q9Y238 1755 aa17.06■□□□□ 0.32
LINC00299-202ENST00000442956 NID2Q14112 1375 aa17.06■□□□□ 0.32
LINC00299-202ENST00000442956 CRKP46108 304 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 RCAN1P53805 252 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 FAM173BQ6P4H8 233 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 USP40Q9NVE5 1235 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 PIM2Q9P1W9 311 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 LAMB1P07942 1786 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 NMT2O60551 498 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 RESTQ13127 1097 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 NTRK3Q16288 839 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 RTN1Q16799 776 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 APOBEC3HQ6NTF7 200 aaKnown RBP17.05■□□□□ 0.32
LINC00299-202ENST00000442956 SLC44A5Q8NCS7 719 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 PHKBQ93100 1093 aa17.05■□□□□ 0.32
LINC00299-202ENST00000442956 YDJCA8MPS7 323 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 FIBPO43427 364 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 NT5C2P49902 561 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 TFAP4Q01664 338 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 PICALMQ13492 652 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 TMEM87AQ8NBN3 555 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 ZNF277Q9NRM2 450 aaPredicted RBP17.04■□□□□ 0.32
LINC00299-202ENST00000442956 PPP1R1BQ9UD71 204 aaPredicted RBP17.04■□□□□ 0.32
LINC00299-202ENST00000442956 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
LINC00299-202ENST00000442956 CDC42EP5Q6NZY7 148 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 CATIPQ7Z7H3 387 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 FANCBQ8NB91 859 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 GPT2Q8TD30 523 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
LINC00299-202ENST00000442956 C8orf76Q96K31 380 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 ZDHHC15Q96MV8 337 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 MRIQ9BWK5 157 aa17.04■□□□□ 0.32
LINC00299-202ENST00000442956 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
LINC00299-202ENST00000442956 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
LINC00299-202ENST00000442956 LARGE2Q8N3Y3 721 aa17.03■□□□□ 0.32
LINC00299-202ENST00000442956 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
LINC00299-202ENST00000442956 CCDC196A0A1B0GTZ2 297 aa17.03■□□□□ 0.32
LINC00299-202ENST00000442956 IFNAR1P17181 557 aa17.03■□□□□ 0.32
LINC00299-202ENST00000442956 KRT85P78386 507 aa17.03■□□□□ 0.32
LINC00299-202ENST00000442956 SOGA3Q5TF21 947 aa17.03■□□□□ 0.32
LINC00299-202ENST00000442956 DDX4Q9NQI0 724 aaKnown RBP17.03■□□□□ 0.32
LINC00299-202ENST00000442956 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
LINC00299-202ENST00000442956 SCN9AQ15858 1988 aa17.02■□□□□ 0.32
LINC00299-202ENST00000442956 KIF13BQ9NQT8 1826 aa17.02■□□□□ 0.32
LINC00299-202ENST00000442956 GADD45BO75293 160 aaPredicted RBP17.02■□□□□ 0.32
LINC00299-202ENST00000442956 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.32
LINC00299-202ENST00000442956 OTUD7BQ6GQQ9 843 aa17.02■□□□□ 0.32
LINC00299-202ENST00000442956 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms