RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 SH2B2O14492 632 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-218ENST00000442625 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.17
MCF2L-218ENST00000442625 GUCY1A2P33402 732 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 LMAN1P49257 510 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 MCM6Q14566 821 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 CCDC102BQ68D86 513 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 LDHAL6AQ6ZMR3 332 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 USP49Q70CQ1 688 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 UBXN6Q9BZV1 441 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 ARFGAP3Q9NP61 516 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 MAN1B1Q9UKM7 699 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 KCNJ14Q9UNX9 436 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 TEX33O43247 280 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 GREM2Q9H772 168 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 FEZ2Q9UHY8 353 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-218ENST00000442625 PCDH11XQ9BZA7 1347 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 PCDH11YQ9BZA8 1340 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 TMEM94Q12767 1356 aa16.14■□□□□ 0.17
MCF2L-218ENST00000442625 POLR2DO15514 142 aaKnown RBP16.13■□□□□ 0.17
MCF2L-218ENST00000442625 ABL1P00519 1130 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 ADD2P35612 726 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 STX17P56962 302 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 TBX2Q13207 712 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-218ENST00000442625 RSRC2Q7L4I2 434 aaKnown RBP16.13■□□□□ 0.17
MCF2L-218ENST00000442625 SRRTQ9BXP5 876 aaKnown RBP16.13■□□□□ 0.17
MCF2L-218ENST00000442625 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-218ENST00000442625 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.13■□□□□ 0.17
MCF2L-218ENST00000442625 SERTAD1Q9UHV2 236 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 WWC3Q9ULE0 1092 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 BTBD18B2RXH4 712 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 N4BP1O75113 896 aaKnown RBP16.13■□□□□ 0.17
MCF2L-218ENST00000442625 KLHL10Q6JEL2 608 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 MPHOSPH8Q99549 860 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 SLC26A6Q9BXS9 759 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 GEMIN8Q9NWZ8 242 aaKnown RBP16.13■□□□□ 0.17
MCF2L-218ENST00000442625 ZNF532Q9HCE3 1301 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 COL18A1P39060 1754 aa16.13■□□□□ 0.17
MCF2L-218ENST00000442625 ITGA6P23229 1130 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 LONRF2Q1L5Z9 754 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 GPR161Q8N6U8 529 aaKnown RBP16.12■□□□□ 0.17
MCF2L-218ENST00000442625 CNNM1Q9NRU3 951 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 SH3BP1Q9Y3L3 701 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 NUP188Q5SRE5 1749 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 LAMB4A4D0S4 1761 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 GOLGA8AA7E2F4 631 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 ZBTB43O43298 467 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 IARSP41252 1262 aaKnown RBP16.12■□□□□ 0.17
MCF2L-218ENST00000442625 CTDSPL2Q05D32 466 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 SPECC1LQ69YQ0 1117 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 CEP120Q8N960 986 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 HELBQ8NG08 1087 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-218ENST00000442625 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.12■□□□□ 0.17
MCF2L-218ENST00000442625 YY1AP1Q9H869 796 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 ADAM21Q9UKJ8 722 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
MCF2L-218ENST00000442625 TUBB4AP04350 444 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 PHKA1P46020 1223 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 ZSCAN26Q16670 478 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 NBPF20Q3BBV1 942 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 TMEM67Q5HYA8 995 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 PRDM11Q9NQV5 511 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-218ENST00000442625 RIC1Q4ADV7 1423 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 ERVV-2B6SEH9 535 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 SNAP23O00161 211 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 PPP6R2O75170 966 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 MDM2Q00987 491 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-218ENST00000442625 TRIM29Q14134 588 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 NTRK3Q16288 839 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 HLFQ16534 295 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 RAD9BQ6WBX8 426 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 C10orf67Q8IYJ2 551 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 JMYQ8N9B5 988 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 ZKSCAN3Q9BRR0 538 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 PDE11AQ9HCR9 933 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 RIPOR2Q9Y4F9 1068 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 MST1RQ04912 1400 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 KCPQ6ZWJ8 1503 aa16.11■□□□□ 0.17
MCF2L-218ENST00000442625 CDKL5O76039 1030 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 TOB1P50616 345 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-218ENST00000442625 SMYD4Q8IYR2 804 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-218ENST00000442625 IGDCC4Q8TDY8 1250 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 PNKPQ96T60 521 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 LY9Q9HBG7 655 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 PCCAP05165 728 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-218ENST00000442625 RHOXF2BP0C7M4 288 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 NR5A1Q13285 461 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 POSTNQ15063 836 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 CPLX2Q6PUV4 134 aaKnown RBP16.1■□□□□ 0.17
MCF2L-218ENST00000442625 ZBTB38Q8NAP3 1195 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-218ENST00000442625 GOLGA1Q92805 767 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 RHOXF2Q9BQY4 288 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 STRN4Q9NRL3 753 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 TACC3Q9Y6A5 838 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 SPEF2Q9C093 1822 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 STX10O60499 249 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 PHACTR2O75167 634 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 CSF1RP07333 972 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 PDE6AP16499 860 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms