RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SPECC1Q5M775 1068 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 STAG1Q8WVM7 1258 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 FOXP1Q9H334 677 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 BCL9O00512 1426 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 NID2Q14112 1375 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 CHD4Q14839 1912 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 CCDC196A0A1B0GTZ2 297 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 GUCY1A2P33402 732 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 ETF1P62495 437 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 FBXO38Q6PIJ6 1188 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 ZNF34Q8IZ26 560 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 STK11IPQ8N1F8 1099 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 TMX1Q9H3N1 280 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 TOB1P50616 345 aaPredicted RBP18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 TMTC2Q8N394 836 aa18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 ZKSCAN3Q9BRR0 538 aa18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 KCNJ14Q9UNX9 436 aa18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 TACC3Q9Y6A5 838 aa18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 SLC4A4Q9Y6R1 1079 aa18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 DEXIO95424 95 aa18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 PTPREP23469 700 aa18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 MDM2Q00987 491 aaPredicted RBP18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 POSTNQ15063 836 aa18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 CCDC93Q567U6 631 aa18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 UTP14AQ9BVJ6 771 aaKnown RBP18.93■□□□□ 0.62
SEMA3B-207ENST00000441915 SNAP23O00161 211 aa18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 PRKAB2O43741 272 aa18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 BMP6P22004 513 aa18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 CCDC82Q8N4S0 544 aa18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 PHLPP2Q6ZVD8 1323 aa18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 FOXN1O15353 648 aa18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 MTA3Q9BTC8 594 aa18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 BTG4Q9NY30 223 aa18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 DACH1Q9UI36 760 aa18.92■□□□□ 0.62
SEMA3B-207ENST00000441915 PNPLA7Q6ZV29 1317 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 NPHP1O15259 732 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 POLR2DO15514 142 aaKnown RBP18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 LCORLQ8N3X6 602 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 RNF41Q9H4P4 317 aaPredicted RBP18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 DNAI1Q9UI46 699 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 FBXO2Q9UK22 296 aaPredicted RBP18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.91■□□□□ 0.625e-7■□□□□ 10.8
SEMA3B-207ENST00000441915 ARAP2Q8WZ64 1704 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 LRP5O75197 1615 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 TMEM232C9JQI7 657 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 PDE4BQ07343 736 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 ERCC6LQ2NKX8 1250 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 FCHSD1Q86WN1 690 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 KRT222Q8N1A0 295 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 CRACR2BQ8N4Y2 399 aaPredicted RBP18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 CEP131Q9UPN4 1083 aa18.91■□□□□ 0.62
SEMA3B-207ENST00000441915 DOCK2Q92608 1830 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 TIAM2Q8IVF5 1701 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 ZSCAN12O43309 604 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 MLKLQ8NB16 471 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 SMARCE1Q969G3 411 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 MAN1B1Q9UKM7 699 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 ARHGAP6O43182 974 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 CDK11BP21127 795 aaKnown RBP18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 RCAN1P53805 252 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 GRIN1Q05586 938 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 NT5DC1Q5TFE4 455 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 ZNF579Q8NAF0 562 aaKnown RBP18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 NUP133Q8WUM0 1156 aa18.9■□□□□ 0.62
SEMA3B-207ENST00000441915 GABPB1Q06547 395 aaPredicted RBP18.89■□□□□ 0.62
SEMA3B-207ENST00000441915 CMTR1Q8N1G2 835 aaKnown RBP18.89■□□□□ 0.62
SEMA3B-207ENST00000441915 FANCBQ8NB91 859 aa18.89■□□□□ 0.62
SEMA3B-207ENST00000441915 NOL10Q9BSC4 688 aaKnown RBP18.89■□□□□ 0.62
SEMA3B-207ENST00000441915 LRP2BPQ9P2M1 347 aa18.89■□□□□ 0.62
SEMA3B-207ENST00000441915 BCAMP50895 628 aa18.89■□□□□ 0.61
SEMA3B-207ENST00000441915 NR5A1Q13285 461 aa18.89■□□□□ 0.61
SEMA3B-207ENST00000441915 KANK3Q6NY19 840 aa18.89■□□□□ 0.61
SEMA3B-207ENST00000441915 UBAC1Q9BSL1 405 aa18.89■□□□□ 0.61
SEMA3B-207ENST00000441915 SEC31BQ9NQW1 1179 aa18.89■□□□□ 0.61
SEMA3B-207ENST00000441915 SERTAD1Q9UHV2 236 aa18.89■□□□□ 0.61
SEMA3B-207ENST00000441915 NFE2L3Q9Y4A8 694 aa18.89■□□□□ 0.61
SEMA3B-207ENST00000441915 PCDHB6Q9Y5E3 794 aa18.89■□□□□ 0.61
SEMA3B-207ENST00000441915 SRPRBQ9Y5M8 271 aaKnown RBP18.89■□□□□ 0.61
SEMA3B-207ENST00000441915 HSP90AA4PQ58FG1 418 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 SUSD4Q5VX71 490 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 ZNF654Q8IZM8 581 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 TRIML1Q8N9V2 468 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 MIGA1Q8NAN2 632 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 INTS13Q9NVM9 706 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 SARSP49591 514 aaKnown RBP18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 GOLGA8FQ08AF8 430 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 GOLGA8DPQ0D2H9 430 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 PTPN21Q16825 1174 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 TRIM65Q6PJ69 517 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 REXO1L1PQ8IX06 675 aa18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 ENOX1Q8TC92 643 aaKnown RBP18.88■□□□□ 0.61
SEMA3B-207ENST00000441915 IGHMBP2P38935 993 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 TAF3Q5VWG9 929 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 SRRTQ9BXP5 876 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 ATP2B1P20020 1258 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 PPARAQ07869 468 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 MORC3Q14149 939 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 PDILTQ8N807 584 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 BAG1Q99933 345 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms