RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 GALNT17Q6IS24 598 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 UIMC1Q96RL1 719 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 CARD11Q9BXL7 1154 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 ETAA1Q9NY74 926 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 NPHP4O75161 1426 aaPredicted RBP12.13□□□□□ -0.47
SYNE2-206ENST00000441438 MASP1P48740 699 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 PAK2Q13177 524 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 MORC3Q14149 939 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 NCAPG2Q86XI2 1143 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 MYLK4Q86YV6 388 aaPredicted RBP12.13□□□□□ -0.47
SYNE2-206ENST00000441438 AP1M1Q9BXS5 423 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
SYNE2-206ENST00000441438 ITSN1Q15811 1721 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 RASA4BC9J798 803 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 NOP2P46087 812 aaKnown RBP12.12□□□□□ -0.47
SYNE2-206ENST00000441438 ROR1Q01973 937 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
SYNE2-206ENST00000441438 FAM135BQ49AJ0 1406 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 PACS1Q6VY07 963 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 KIAA0825Q8IV33 1275 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 ANKRD49Q8WVL7 239 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 ZNF75CPQ92670 426 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-206ENST00000441438 TOPAZ1Q8N9V7 1692 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 NBNO60934 754 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 MTRF1O75570 445 aaKnown RBP12.12□□□□□ -0.47
SYNE2-206ENST00000441438 AGR2O95994 175 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 MAPK1P28482 360 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
SYNE2-206ENST00000441438 PNMA8AQ86V59 439 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-206ENST00000441438 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 DCLK2Q8N568 766 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 C1orf74Q96LT6 269 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 CNTN3Q9P232 1028 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 B3GALNT1O75752 331 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 FGRP09769 529 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 DNAJB2P25686 324 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 DALRD3Q5D0E6 543 aaKnown RBP12.12□□□□□ -0.47
SYNE2-206ENST00000441438 C10orf76Q5T2E6 689 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 ASB16Q96NS5 453 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 SLC26A8Q96RN1 970 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 PDRG1Q9NUG6 133 aa12.12□□□□□ -0.47
SYNE2-206ENST00000441438 PIK3C2GO75747 1445 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 RASA4O43374 803 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 PRPHP41219 470 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 HALP42357 657 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 MRPL28Q13084 256 aaKnown RBP12.11□□□□□ -0.47
SYNE2-206ENST00000441438 KIF4BQ2VIQ3 1234 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 KCT2Q8NC54 265 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 CHMP5Q9NZZ3 219 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 KRT72Q14CN4 511 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 NEK10Q6ZWH5 1172 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-206ENST00000441438 RSAD2Q8WXG1 361 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
SYNE2-206ENST00000441438 NHSL1Q5SYE7 1610 aa12.11□□□□□ -0.47
SYNE2-206ENST00000441438 ADGRB1O14514 1584 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 USP47Q96K76 1375 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 ST20-MTHFSA0A0A6YYL1 179 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 COL22A1Q8NFW1 1626 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-206ENST00000441438 CDC45O75419 566 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 ZNF24P17028 368 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 IL31Q6EBC2 164 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 HAUS7Q99871 368 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 ZNF304Q9HCX3 659 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 INPP5FQ9Y2H2 1132 aa12.1□□□□□ -0.47
SYNE2-206ENST00000441438 AHDC1Q5TGY3 1603 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-206ENST00000441438 MAP3K7O43318 606 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 PRMT3O60678 531 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 MYBL2P10244 700 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 POU3F3P20264 500 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-206ENST00000441438 NLRP12P59046 1061 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 CATSPER4Q7RTX7 472 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 DGKHQ86XP1 1220 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 TEX9Q8N6V9 391 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 ZBTB10Q96DT7 871 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 TCHPQ9BT92 498 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 C2orf49Q9BVC5 232 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-206ENST00000441438 SAGE1Q9NXZ1 904 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 BARX2Q9UMQ3 279 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-206ENST00000441438 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
SYNE2-206ENST00000441438 FMN2Q9NZ56 1722 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-206ENST00000441438 CCNCP24863 283 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 FBXO10Q9UK96 956 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 TMEM98Q9Y2Y6 226 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 TOR1BO14657 336 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 IMPDH2P12268 514 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 NEK3P51956 506 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 VAC14Q08AM6 782 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 TMEM151BQ8IW70 566 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 VPS52Q8N1B4 723 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 TATDN2Q93075 761 aa12.09□□□□□ -0.47
SYNE2-206ENST00000441438 PIH1D1Q9NWS0 290 aaKnown RBP12.09□□□□□ -0.47
SYNE2-206ENST00000441438 ARHGEF28Q8N1W1 1705 aaKnown RBP12.08□□□□□ -0.47
SYNE2-206ENST00000441438 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms