RNA–Protein interactions for RNA: ENST00000441219.5

GABRE-203, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-203ENST00000441219 MROH5Q6ZUA9 1318 aa11.15□□□□□ -0.62
GABRE-203ENST00000441219 MRPS5P82675 430 aaKnown RBP11.14□□□□□ -0.63
GABRE-203ENST00000441219 METTL24Q5JXM2 366 aa11.14□□□□□ -0.63
GABRE-203ENST00000441219 NECAB3Q96P71 396 aaPredicted RBP11.14□□□□□ -0.63
GABRE-203ENST00000441219 CACNA1AO00555 2505 aa11.14□□□□□ -0.63
GABRE-203ENST00000441219 DOCK3Q8IZD9 2030 aa11.14□□□□□ -0.63
GABRE-203ENST00000441219 DDTLA6NHG4 134 aaPredicted RBP11.13□□□□□ -0.63
GABRE-203ENST00000441219 DNAJB2P25686 324 aa11.13□□□□□ -0.63
GABRE-203ENST00000441219 PRDX5P30044 214 aa11.13□□□□□ -0.63
GABRE-203ENST00000441219 RGS2P41220 211 aa11.13□□□□□ -0.63
GABRE-203ENST00000441219 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
GABRE-203ENST00000441219 LRRC24Q50LG9 513 aa11.13□□□□□ -0.63
GABRE-203ENST00000441219 POTEEQ6S8J3 1075 aa11.13□□□□□ -0.63
GABRE-203ENST00000441219 TXNRD2Q9NNW7 524 aa11.13□□□□□ -0.63
GABRE-203ENST00000441219 FAM196BA6NMK8 535 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 F6X3S4 739 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 DNM1LO00429 736 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 APAF1O14727 1248 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 CNGA1P29973 690 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 TWISTNBQ3B726 338 aaPredicted RBP11.12□□□□□ -0.63
GABRE-203ENST00000441219 TRIM60Q495X7 471 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 BEND3Q5T5X7 828 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 SH3RF1Q7Z6J0 888 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
GABRE-203ENST00000441219 ZNF280CQ8ND82 737 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 GPRC5AQ8NFJ5 357 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 WDR66Q8TBY9 1149 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 USP6NLQ92738 828 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 GAS2L1Q99501 681 aaPredicted RBP11.12□□□□□ -0.63
GABRE-203ENST00000441219 P2RX7Q99572 595 aaKnown RBP11.12□□□□□ -0.63
GABRE-203ENST00000441219 APBA2Q99767 749 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 ZNF576Q9H609 170 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 PDLIM7Q9NR12 457 aa11.12□□□□□ -0.63
GABRE-203ENST00000441219 DDX20Q9UHI6 824 aaKnown RBP11.12□□□□□ -0.63
GABRE-203ENST00000441219 TRIM43BA6NCK2 446 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 GRM8O00222 908 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 ENTPD3O75355 529 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 MYCNP04198 464 aaPredicted RBP11.11□□□□□ -0.63
GABRE-203ENST00000441219 MAPK4P31152 587 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 EPHB4P54760 987 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 MAP3K10Q02779 954 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 PICALMQ13492 652 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 RALBP1Q15311 655 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 CCDC85BQ15834 202 aaPredicted RBP11.11□□□□□ -0.63
GABRE-203ENST00000441219 GJC2Q5T442 439 aaPredicted RBP11.11□□□□□ -0.63
GABRE-203ENST00000441219 MFSD14CQ5VZR4 134 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 ALYREFQ86V81 257 aaKnown RBP11.11□□□□□ -0.63
GABRE-203ENST00000441219 LPAR1Q92633 364 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 TRIM43Q96BQ3 446 aaPredicted RBP11.11□□□□□ -0.63
GABRE-203ENST00000441219 TIFAQ96CG3 184 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 PORCNQ9H237 461 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 CWC22Q9HCG8 908 aaKnown RBP11.11□□□□□ -0.63
GABRE-203ENST00000441219 A0A1B0GUL6 1792 aa11.11□□□□□ -0.63
GABRE-203ENST00000441219 PDE8BO95263 885 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
GABRE-203ENST00000441219 IFIT1P09914 478 aaKnown RBP11.1□□□□□ -0.63
GABRE-203ENST00000441219 MORN1Q5T089 497 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 SLC39A5Q6ZMH5 540 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 GPR142Q7Z601 462 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 PLEKHH3Q7Z736 793 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 VGLL2Q8N8G2 317 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 PAGR1Q9BTK6 254 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 LRFN3Q9BTN0 628 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 IDI2Q9BXS1 227 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 PRDM12Q9H4Q4 367 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 DDX4Q9NQI0 724 aaKnown RBP11.1□□□□□ -0.63
GABRE-203ENST00000441219 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
GABRE-203ENST00000441219 FLRT1Q9NZU1 646 aa11.1□□□□□ -0.63
GABRE-203ENST00000441219 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
GABRE-203ENST00000441219 HERVK_113P62684 666 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 MAP2K5Q13163 448 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 Q3C1V9 767 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 SUCLG2Q96I99 432 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 SNX27Q96L92 541 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.09□□□□□ -0.634e-10■■■■■ 31.4
GABRE-203ENST00000441219 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.09□□□□□ -0.63
GABRE-203ENST00000441219 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.09□□□□□ -0.63
GABRE-203ENST00000441219 KBTBD13C9JR72 458 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 MSCO60682 206 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 IGFBP4P22692 258 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 ITGB8P26012 769 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 ERVK-9P63128 1117 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 ERVK-24P63145 666 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 MTMR2Q13614 643 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 PUM3Q15397 648 aaKnown RBP11.09□□□□□ -0.63
GABRE-203ENST00000441219 SH3D19Q5HYK7 790 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 ANO1Q5XXA6 986 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 FERMT2Q96AC1 680 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 EPHX3Q9H6B9 360 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 RBPJLQ9UBG7 517 aa11.09□□□□□ -0.63
GABRE-203ENST00000441219 RFX7Q2KHR2 1363 aa11.08□□□□□ -0.64
GABRE-203ENST00000441219 USP17L5A8MUK1 530 aa11.08□□□□□ -0.64
GABRE-203ENST00000441219 FGFR2P21802 821 aa11.08□□□□□ -0.64
GABRE-203ENST00000441219 CYP2C19P33261 490 aa11.08□□□□□ -0.64
GABRE-203ENST00000441219 TLE2Q04725 743 aa11.08□□□□□ -0.64
GABRE-203ENST00000441219 ADGRE1Q14246 886 aa11.08□□□□□ -0.64
GABRE-203ENST00000441219 NCBP3Q53F19 620 aaKnown RBP11.08□□□□□ -0.64
GABRE-203ENST00000441219 WDR78Q5VTH9 848 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms