RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
PLOD3-205ENST00000440925 COL2A1P02458 1487 aaPredicted RBP17.75■□□□□ 0.43
PLOD3-205ENST00000440925 PHF20L1A8MW92 1017 aa17.75■□□□□ 0.43
PLOD3-205ENST00000440925 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
PLOD3-205ENST00000440925 TDO2P48775 406 aa17.75■□□□□ 0.43
PLOD3-205ENST00000440925 SHROOM1Q2M3G4 852 aaPredicted RBP17.75■□□□□ 0.43
PLOD3-205ENST00000440925 CST9Q5W186 159 aa17.75■□□□□ 0.43
PLOD3-205ENST00000440925 FOXP4Q8IVH2 680 aaPredicted RBP17.75■□□□□ 0.43
PLOD3-205ENST00000440925 STK11IPQ8N1F8 1099 aa17.75■□□□□ 0.43
PLOD3-205ENST00000440925 NACAP1Q9BZK3 213 aa17.75■□□□□ 0.43
PLOD3-205ENST00000440925 DHX36Q9H2U1 1008 aaKnown RBP17.75■□□□□ 0.43
PLOD3-205ENST00000440925 PI4KBQ9UBF8 816 aa17.75■□□□□ 0.43
PLOD3-205ENST00000440925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.75■□□□□ 0.43
PLOD3-205ENST00000440925 TBC1D12O60347 775 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 USP2O75604 605 aaPredicted RBP17.74■□□□□ 0.43
PLOD3-205ENST00000440925 REC8O95072 547 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 SHMT1P34896 483 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 TNNI2P48788 182 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 TNFAIP1Q13829 316 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 TSGA10IPQ3SY00 556 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 SULF1Q8IWU6 871 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 CSRNP1Q96S65 589 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 KIF2CQ99661 725 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 PPP2R3BQ9Y5P8 575 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 MYH1P12882 1939 aa17.74■□□□□ 0.43
PLOD3-205ENST00000440925 EPB41L2O43491 1005 aaKnown RBP17.73■□□□□ 0.43
PLOD3-205ENST00000440925 CDK8P49336 464 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 ADCK5Q3MIX3 580 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 TATDN1Q6P1N9 297 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 C16orf86Q6ZW13 317 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 MOB2Q70IA6 237 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 TTC6Q86TZ1 520 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 ZSCAN29Q8IWY8 852 aaPredicted RBP17.73■□□□□ 0.43
PLOD3-205ENST00000440925 EHD4Q9H223 541 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 ARPP21Q9UBL0 812 aaPredicted RBP17.73■□□□□ 0.43
PLOD3-205ENST00000440925 CTNNA3Q9UI47 895 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 ZNF112Q9UJU3 913 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 SNX14Q9Y5W7 946 aa17.73■□□□□ 0.43
PLOD3-205ENST00000440925 PASKQ96RG2 1323 aa17.72■□□□□ 0.43
PLOD3-205ENST00000440925 ZNF213O14771 459 aa17.72■□□□□ 0.43
PLOD3-205ENST00000440925 PRDM1O75626 825 aa17.72■□□□□ 0.43
PLOD3-205ENST00000440925 IL17RAQ96F46 866 aa17.72■□□□□ 0.43
PLOD3-205ENST00000440925 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.72■□□□□ 0.43
PLOD3-205ENST00000440925 ROBO3Q96MS0 1386 aa17.71■□□□□ 0.43
PLOD3-205ENST00000440925 E7EWF7 191 aa17.71■□□□□ 0.43
PLOD3-205ENST00000440925 RASA1P20936 1047 aa17.71■□□□□ 0.43
PLOD3-205ENST00000440925 SERPINB13Q9UIV8 391 aa17.71■□□□□ 0.43
PLOD3-205ENST00000440925 NAV1Q8NEY1 1877 aa17.71■□□□□ 0.43
PLOD3-205ENST00000440925 TOMM70O94826 608 aa17.7■□□□□ 0.42
PLOD3-205ENST00000440925 GUCY1A2P33402 732 aa17.7■□□□□ 0.42
PLOD3-205ENST00000440925 AKNAD1Q5T1N1 836 aa17.7■□□□□ 0.42
PLOD3-205ENST00000440925 RBM46Q8TBY0 533 aaKnown RBP17.7■□□□□ 0.42
PLOD3-205ENST00000440925 STAG1Q8WVM7 1258 aa17.7■□□□□ 0.42
PLOD3-205ENST00000440925 NEDD4P46934 1319 aa17.7■□□□□ 0.42
PLOD3-205ENST00000440925 PRKG1Q13976 671 aa17.69■□□□□ 0.42
PLOD3-205ENST00000440925 IMMTQ16891 758 aaKnown RBP17.69■□□□□ 0.42
PLOD3-205ENST00000440925 SIAH1Q8IUQ4 282 aa17.69■□□□□ 0.42
PLOD3-205ENST00000440925 KLRG1Q96E93 195 aa17.69■□□□□ 0.42
PLOD3-205ENST00000440925 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.69■□□□□ 0.42
PLOD3-205ENST00000440925 ORC4O43929 436 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 HLA-DOAP06340 250 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 CPA1P15085 419 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 AKR1B1P15121 316 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 INPP5BP32019 993 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
PLOD3-205ENST00000440925 MAP3K11Q16584 847 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 SUPT20HL1Q3ZLR7 823 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 FAM47AQ5JRC9 791 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.68■□□□□ 0.42
PLOD3-205ENST00000440925 CYB5R4Q7L1T6 521 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 DDRGK1Q96HY6 314 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 C22orf23Q9BZE7 217 aa17.68■□□□□ 0.42
PLOD3-205ENST00000440925 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.68■□□□□ 0.42
PLOD3-205ENST00000440925 ANTXR2P58335 489 aa17.67■□□□□ 0.42
PLOD3-205ENST00000440925 EXOSC10Q01780 885 aaKnown RBP17.67■□□□□ 0.42
PLOD3-205ENST00000440925 LDLRAD1Q5T700 205 aa17.67■□□□□ 0.42
PLOD3-205ENST00000440925 MB21D2Q8IYB1 491 aaPredicted RBP17.67■□□□□ 0.42
PLOD3-205ENST00000440925 ZKSCAN4Q969J2 545 aaPredicted RBP17.67■□□□□ 0.42
PLOD3-205ENST00000440925 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
PLOD3-205ENST00000440925 ZSWIM5Q9P217 1185 aa17.67■□□□□ 0.42
PLOD3-205ENST00000440925 HERC5Q9UII4 1024 aaKnown RBP17.67■□□□□ 0.42
PLOD3-205ENST00000440925 IGKV6D-41A0A0C4DH26 115 aa17.66■□□□□ 0.42
PLOD3-205ENST00000440925 UBE2Q2LH0YL09 131 aa17.66■□□□□ 0.42
PLOD3-205ENST00000440925 MFSD6Q6ZSS7 791 aa17.66■□□□□ 0.42
PLOD3-205ENST00000440925 SMC1BQ8NDV3 1235 aa17.66■□□□□ 0.42
PLOD3-205ENST00000440925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.66■□□□□ 0.42
PLOD3-205ENST00000440925 TBC1D32Q96NH3 1257 aa17.66■□□□□ 0.42
PLOD3-205ENST00000440925 B4E1Z4 1266 aa17.65■□□□□ 0.42
PLOD3-205ENST00000440925 NMT2O60551 498 aa17.65■□□□□ 0.42
PLOD3-205ENST00000440925 CELF2O95319 508 aaKnown RBP17.65■□□□□ 0.42
PLOD3-205ENST00000440925 GDF11O95390 407 aa17.65■□□□□ 0.42
PLOD3-205ENST00000440925 CAP2P40123 477 aa17.65■□□□□ 0.42
PLOD3-205ENST00000440925 CHST3Q7LGC8 479 aa17.65■□□□□ 0.42
PLOD3-205ENST00000440925 ZNF341Q9BYN7 854 aa17.65■□□□□ 0.42
PLOD3-205ENST00000440925 GPHNQ9NQX3 736 aaPredicted RBP17.65■□□□□ 0.42
PLOD3-205ENST00000440925 SWAP70Q9UH65 585 aa17.65■□□□□ 0.42
PLOD3-205ENST00000440925 NOVP48745 357 aa17.64■□□□□ 0.41
PLOD3-205ENST00000440925 TFAP4Q01664 338 aa17.64■□□□□ 0.41
PLOD3-205ENST00000440925 CERKLQ49MI3 558 aaPredicted RBP17.64■□□□□ 0.41
PLOD3-205ENST00000440925 CCDC84Q86UT8 332 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms