RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 CCDC84Q86UT8 332 aaPredicted RBP14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 ITPRIPQ8IWB1 547 aa14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 PROCA1Q8NCQ7 364 aaPredicted RBP14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 SH3RF3Q8TEJ3 882 aaPredicted RBP14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 SMCR8Q8TEV9 937 aaPredicted RBP14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 ZNF512BQ96KM6 892 aaPredicted RBP14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 BIN2Q9UBW5 565 aaPredicted RBP14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 AGTPBP1Q9UPW5 1226 aa14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 NOP58Q9Y2X3 529 aaKnown RBP14.26□□□□□ -0.13
UBE2D4-204ENST00000440899 ZBTB7BO15156 539 aaPredicted RBP14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 CYP2E1P05181 493 aaPredicted RBP14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 PRKCZQ05513 592 aa14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 SPP2Q13103 211 aa14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 ZNF280CQ8ND82 737 aa14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 SLAIN1Q8ND83 568 aa14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 NKX2-3Q8TAU0 364 aa14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 DHX36Q9H2U1 1008 aaKnown RBP14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 C1orf115Q9H7X2 142 aa14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 PI4KBQ9UBF8 816 aa14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 PNMA3Q9UL41 463 aa14.25□□□□□ -0.13
UBE2D4-204ENST00000440899 USP17L5A8MUK1 530 aa14.24□□□□□ -0.13
UBE2D4-204ENST00000440899 GJB1P08034 283 aa14.24□□□□□ -0.13
UBE2D4-204ENST00000440899 RLBP1P12271 317 aa14.24□□□□□ -0.13
UBE2D4-204ENST00000440899 UBXN2AP68543 259 aa14.24□□□□□ -0.13
UBE2D4-204ENST00000440899 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBE2D4-204ENST00000440899 MIER1Q8N108 512 aa14.24□□□□□ -0.13
UBE2D4-204ENST00000440899 AATFQ9NY61 560 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBE2D4-204ENST00000440899 GABRQQ9UN88 632 aa14.24□□□□□ -0.13
UBE2D4-204ENST00000440899 DOCK1Q14185 1865 aa14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 ADCY3O60266 1144 aa14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 CCL5P13501 91 aa14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 ZAP70P43403 619 aa14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 HABP4Q5JVS0 413 aaKnown RBP14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 TREML2Q5T2D2 321 aa14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 RNF208Q9H0X6 261 aa14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 DBNLQ9UJU6 430 aaKnown RBP14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 CEP290O15078 2479 aa14.23□□□□□ -0.13
UBE2D4-204ENST00000440899 TNPO2O14787 897 aaKnown RBP14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 GJA8P48165 433 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 GCLCP48506 637 aaPredicted RBP14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 FLT3LGP49771 235 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 HMGCS2P54868 508 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 IRF5Q13568 498 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 RRP1BQ14684 758 aaKnown RBP14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 FAM110CQ1W6H9 321 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 SH3D19Q5HYK7 790 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 METTL16Q86W50 562 aaKnown RBP14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 MAPKAPK5Q8IW41 473 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 ANKRD13CQ8N6S4 541 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 TGFBRAP1Q8WUH2 860 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 COA7Q96BR5 231 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 SHISA4Q96DD7 197 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 WDR18Q9BV38 432 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 CCDC8Q9H0W5 538 aaPredicted RBP14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 AS3MTQ9HBK9 375 aa14.22□□□□□ -0.13
UBE2D4-204ENST00000440899 PHIPQ8WWQ0 1821 aa14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 ASNSP08243 561 aa14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 CYP7A1P22680 504 aa14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 ADGRA1Q86SQ6 560 aa14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 CRACR2BQ8N4Y2 399 aaPredicted RBP14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 PXYLP1Q8TE99 480 aa14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 EAF2Q96CJ1 260 aaPredicted RBP14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 TRIM34Q9BYJ4 488 aa14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 PIH1D3Q9NQM4 214 aaKnown RBP14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 GINM1Q9NU53 330 aa14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 TLR7Q9NYK1 1049 aaKnown RBP14.21□□□□□ -0.13
UBE2D4-204ENST00000440899 FLT1P17948 1338 aa14.2□□□□□ -0.14
UBE2D4-204ENST00000440899 PTPRFP10586 1907 aa14.2□□□□□ -0.14
UBE2D4-204ENST00000440899 CAPN2P17655 700 aa14.2□□□□□ -0.14
UBE2D4-204ENST00000440899 DIEXFQ68CQ4 756 aaKnown RBP14.2□□□□□ -0.14
UBE2D4-204ENST00000440899 CEP85Q6P2H3 762 aa14.2□□□□□ -0.14
UBE2D4-204ENST00000440899 CERS3Q8IU89 383 aa14.2□□□□□ -0.14
UBE2D4-204ENST00000440899 ERC1Q8IUD2 1116 aa14.2□□□□□ -0.14
UBE2D4-204ENST00000440899 ASCC2Q9H1I8 757 aaPredicted RBP14.2□□□□□ -0.14
UBE2D4-204ENST00000440899 PALD1Q9ULE6 856 aa14.2□□□□□ -0.14
UBE2D4-204ENST00000440899 IDH1O75874 414 aaKnown RBP14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 HLA-DOAP06340 250 aa14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 ELNP15502 786 aa14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 BACE1P56817 501 aa14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 TMED8Q6PL24 325 aaPredicted RBP14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 UBE2Q1Q7Z7E8 422 aa14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 U2AF1L4Q8WU68 220 aaKnown RBP14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 UNC93B1Q9H1C4 597 aa14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 DNAJC18Q9H819 358 aa14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 TMOD4Q9NZQ9 345 aa14.19□□□□□ -0.14
UBE2D4-204ENST00000440899 ZBED9Q6R2W3 1325 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 C19orf81C9J6K1 198 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 USP17L10C9JJH3 530 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 H0YGN5 161 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 SGPL1O95470 568 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 INHAP05111 366 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 MS4A1P11836 297 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 HOXA7P31268 230 aaPredicted RBP14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 DYNLL1P63167 89 aaKnown RBP14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 JAG1P78504 1218 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 MAP3K12Q12852 859 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 MTMR2Q13614 643 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 HSP90AB4PQ58FF6 505 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms