RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 DENND2AQ9ULE3 1009 aa9.16□□□□□ -0.94
COPS3-203ENST00000439936 DDX11L8A8MPP1 907 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 SMARCA5O60264 1052 aaPredicted RBP9.15□□□□□ -0.94
COPS3-203ENST00000439936 IGHDP01880 384 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 CD46P15529 392 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 CCDC158Q5M9N0 1113 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 AACSQ86V21 672 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 SCUBE3Q8IX30 993 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 SMC1BQ8NDV3 1235 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 TBC1D22AQ8WUA7 517 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 LRRCC1Q9C099 1032 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 MYOZ2Q9NPC6 264 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 TLR7Q9NYK1 1049 aaKnown RBP9.15□□□□□ -0.94
COPS3-203ENST00000439936 HMG20BQ9P0W2 317 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 HDAC9Q9UKV0 1011 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 ZNF609O15014 1411 aa9.15□□□□□ -0.94
COPS3-203ENST00000439936 AKAP11Q9UKA4 1901 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 UQCRFS1P1P0C7P4 283 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 ARID4AP29374 1257 aaPredicted RBP9.14□□□□□ -0.95
COPS3-203ENST00000439936 MCAMP43121 646 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 FSTL1Q12841 308 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 HDAC1Q13547 482 aaPredicted RBP9.14□□□□□ -0.95
COPS3-203ENST00000439936 RASGRF1Q13972 1273 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 SCARF1Q14162 830 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 KIF4BQ2VIQ3 1234 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 NBPF9Q3BBW0 867 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 TTC39AQ5SRH9 613 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 MAP1SQ66K74 1059 aaPredicted RBP9.14□□□□□ -0.95
COPS3-203ENST00000439936 PI16Q6UXB8 463 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 SULF1Q8IWU6 871 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 CNTROBQ8N137 903 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 ARAP2Q8WZ64 1704 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 ZBED3Q96IU2 234 aaPredicted RBP9.14□□□□□ -0.95
COPS3-203ENST00000439936 MRIQ9BWK5 157 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 RWDD1Q9H446 243 aaPredicted RBP9.14□□□□□ -0.95
COPS3-203ENST00000439936 SNRKQ9NRH2 765 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 TTF2Q9UNY4 1162 aaKnown RBP9.14□□□□□ -0.95
COPS3-203ENST00000439936 PCDHAC2Q9Y5I4 1007 aa9.14□□□□□ -0.95
COPS3-203ENST00000439936 ASTN2O75129 1339 aaPredicted RBP9.14□□□□□ -0.95
COPS3-203ENST00000439936 WNT10BO00744 389 aa9.13□□□□□ -0.95
COPS3-203ENST00000439936 ADH1BP00325 375 aa9.13□□□□□ -0.95
COPS3-203ENST00000439936 IFIT2P09913 472 aaKnown RBP9.13□□□□□ -0.95
COPS3-203ENST00000439936 FMR1Q06787 632 aaKnown RBP eCLIP9.13□□□□□ -0.95
COPS3-203ENST00000439936 DLGAP5Q15398 846 aa9.13□□□□□ -0.95
COPS3-203ENST00000439936 TBC1D9Q6ZT07 1266 aa9.13□□□□□ -0.95
COPS3-203ENST00000439936 SPATA5Q8NB90 893 aa9.13□□□□□ -0.95
COPS3-203ENST00000439936 ZNF512BQ96KM6 892 aaPredicted RBP9.13□□□□□ -0.95
COPS3-203ENST00000439936 PRMT6Q96LA8 375 aaPredicted RBP9.13□□□□□ -0.95
COPS3-203ENST00000439936 BEGAINQ9BUH8 593 aa9.13□□□□□ -0.95
COPS3-203ENST00000439936 SUGT1Q9Y2Z0 365 aa9.13□□□□□ -0.95
COPS3-203ENST00000439936 ADAMTSL1Q8N6G6 1762 aa9.13□□□□□ -0.95
COPS3-203ENST00000439936 MYO5AQ9Y4I1 1855 aaKnown RBP9.13□□□□□ -0.95
COPS3-203ENST00000439936 SALL1Q9NSC2 1324 aa9.13□□□□□ -0.95
COPS3-203ENST00000439936 LDHBP07195 334 aaKnown RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 PRDX5P30044 214 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 ZAP70P43403 619 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 RBM5P52756 815 aaKnown RBP eCLIP9.12□□□□□ -0.95
COPS3-203ENST00000439936 HDLBPQ00341 1268 aaKnown RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 FUT2Q10981 343 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 CFAP100Q494V2 611 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 PLA2G2CQ5R387 149 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 ZNF697Q5TEC3 545 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 ANKRD45Q5TZF3 282 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 DLK2Q6UY11 383 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 USP48Q86UV5 1035 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 MTMR14Q8NCE2 650 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 DCPSQ96C86 337 aaKnown RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 DDRGK1Q96HY6 314 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 ABCF2Q9UG63 623 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 COL1A1P02452 1464 aaPredicted RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 PDS5AQ29RF7 1337 aaKnown RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 NR1I2O75469 434 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 CYP2E1P05181 493 aaPredicted RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 CRKP46108 304 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 TMEM132AQ24JP5 1023 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 MORN1Q5T089 497 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 ANGEL2Q5VTE6 544 aaKnown RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 SPTY2D1Q68D10 685 aaPredicted RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 HHIPL2Q6UWX4 724 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 LIAT1Q6ZQX7 453 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 CDC37L1Q7L3B6 337 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 GCC1Q96CN9 775 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 GLIS2Q9BZE0 524 aaPredicted RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 TDRD3Q9H7E2 651 aaKnown RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 SERPINA10Q9UK55 444 aa9.12□□□□□ -0.95
COPS3-203ENST00000439936 SCAF8Q9UPN6 1271 aaKnown RBP9.12□□□□□ -0.95
COPS3-203ENST00000439936 MYH2Q9UKX2 1941 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 AOX1Q06278 1338 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 TRAF5O00463 557 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 CENPBP07199 599 aaPredicted RBP9.11□□□□□ -0.95
COPS3-203ENST00000439936 ATP5JP18859 108 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 GCGRP47871 477 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 KRT26Q7Z3Y9 468 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 SMC5Q8IY18 1101 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 ZGPATQ8N5A5 531 aaKnown RBP9.11□□□□□ -0.95
COPS3-203ENST00000439936 TEKT1Q969V4 418 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 GGA3Q9NZ52 723 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 NDUFB9Q9Y6M9 179 aa9.11□□□□□ -0.95
COPS3-203ENST00000439936 PASKQ96RG2 1323 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms