RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 EHD4Q9H223 541 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 PI4KBQ9UBF8 816 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 ROBO3Q96MS0 1386 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 CPA1P15085 419 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 TNNI2P48788 182 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 CDK8P49336 464 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 MAP3K10Q02779 954 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 TNFAIP1Q13829 316 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 KRT32Q14532 448 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 EAPPQ56P03 285 aaPredicted RBP8.88□□□□□ -0.99
UBR3-205ENST00000439681 PRAMEF18Q5VWM3 479 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 FOXP4Q8IVH2 680 aaPredicted RBP8.88□□□□□ -0.99
UBR3-205ENST00000439681 ZSCAN29Q8IWY8 852 aaPredicted RBP8.88□□□□□ -0.99
UBR3-205ENST00000439681 AMOTL1Q8IY63 956 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 SLC44A5Q8NCS7 719 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 ZNF526Q8TF50 670 aaPredicted RBP8.88□□□□□ -0.99
UBR3-205ENST00000439681 JAKMIP1Q96N16 626 aaKnown RBP8.88□□□□□ -0.99
UBR3-205ENST00000439681 DNAJC18Q9H819 358 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 WDR90Q96KV7 1748 aa8.87□□□□□ -0.99
UBR3-205ENST00000439681 NEDD4P46934 1319 aa8.87□□□□□ -0.99
UBR3-205ENST00000439681 COL2A1P02458 1487 aaPredicted RBP8.87□□□□□ -0.99
UBR3-205ENST00000439681 ORC4O43929 436 aa8.87□□□□□ -0.99
UBR3-205ENST00000439681 PRDM1O75626 825 aa8.87□□□□□ -0.99
UBR3-205ENST00000439681 HLA-DOAP06340 250 aa8.87□□□□□ -0.99
UBR3-205ENST00000439681 MFSD6Q6ZSS7 791 aa8.87□□□□□ -0.99
UBR3-205ENST00000439681 DCPSQ96C86 337 aaKnown RBP8.87□□□□□ -0.99
UBR3-205ENST00000439681 NEK1Q96PY6 1258 aa8.87□□□□□ -0.99
UBR3-205ENST00000439681 CSRNP1Q96S65 589 aa8.87□□□□□ -0.99
UBR3-205ENST00000439681 SERPINB13Q9UIV8 391 aa8.87□□□□□ -0.99
UBR3-205ENST00000439681 ADM5C9JUS6 153 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 TBC1D12O60347 775 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 SLC3A2P08195 630 aaKnown RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 PCP11498 1178 aaKnown RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 PRKCSHP14314 528 aaPredicted RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 SHMT1P34896 483 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 EXOSC10Q01780 885 aaKnown RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 NBPF12Q5TAG4 269 aaPredicted RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 USP48Q86UV5 1035 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 MB21D2Q8IYB1 491 aaPredicted RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 RNF41Q9H4P4 317 aaPredicted RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 PPP2R3BQ9Y5P8 575 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 B4E1Z4 1266 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 CASTP20810 708 aaKnown RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 RASA1P20936 1047 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 PSMA5P28066 241 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 ANTXR2P58335 489 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 PDE4BQ07343 736 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 RRP1BQ14684 758 aaKnown RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 TATDN1Q6P1N9 297 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 CYB5R4Q7L1T6 521 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 KRT26Q7Z3Y9 468 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 NCOA7Q8NI08 942 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 UPF3BQ9BZI7 483 aaKnown RBP8.86□□□□□ -0.99
UBR3-205ENST00000439681 ZSWIM5Q9P217 1185 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 SWAP70Q9UH65 585 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 TAOK2Q9UL54 1235 aa8.86□□□□□ -0.99
UBR3-205ENST00000439681 KDM4AO75164 1064 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 RPS6KB1P23443 525 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 RABEP1Q15276 862 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 RRP12Q5JTH9 1297 aaKnown RBP8.85□□□□□ -0.99
UBR3-205ENST00000439681 RUFY3Q7L099 469 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 MIGA2Q7L4E1 593 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 DHX32Q7L7V1 743 aaKnown RBP8.85□□□□□ -0.99
UBR3-205ENST00000439681 SULF1Q8IWU6 871 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 GLIS2Q9BZE0 524 aaPredicted RBP8.85□□□□□ -0.99
UBR3-205ENST00000439681 KRT23Q9C075 422 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 CNNM2Q9H8M5 875 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 MKNK2Q9HBH9 465 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 HERC5Q9UII4 1024 aaKnown RBP8.85□□□□□ -0.99
UBR3-205ENST00000439681 CLEC11AQ9Y240 323 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 PHF20L1A8MW92 1017 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 HMGB1P09429 215 aaKnown RBP8.85□□□□□ -0.99
UBR3-205ENST00000439681 JAG1P78504 1218 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 TRDNQ13061 729 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 FAM47AQ5JRC9 791 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 MAP1SQ66K74 1059 aaPredicted RBP8.85□□□□□ -0.99
UBR3-205ENST00000439681 BLOC1S2Q6QNY1 142 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 CDC37L1Q7L3B6 337 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 CHST3Q7LGC8 479 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 LDHDQ86WU2 507 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 CRACR2BQ8N4Y2 399 aaPredicted RBP8.85□□□□□ -0.99
UBR3-205ENST00000439681 TCEANC2Q96MN5 208 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 TTC14Q96N46 770 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.85□□□□□ -0.99
UBR3-205ENST00000439681 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.85□□□□□ -0.99
UBR3-205ENST00000439681 RBM19Q9Y4C8 960 aaKnown RBP8.85□□□□□ -0.99
UBR3-205ENST00000439681 CYP46A1Q9Y6A2 500 aa8.85□□□□□ -0.99
UBR3-205ENST00000439681 DDX60LQ5H9U9 1706 aaKnown RBP8.84□□□□□ -0.99
UBR3-205ENST00000439681 PRC1O43663 620 aa8.84□□□□□ -0.99
UBR3-205ENST00000439681 RANBP6O60518 1105 aaKnown RBP8.84□□□□□ -0.99
UBR3-205ENST00000439681 NEK4P51957 841 aa8.84□□□□□ -0.99
UBR3-205ENST00000439681 TFAP4Q01664 338 aa8.84□□□□□ -0.99
UBR3-205ENST00000439681 RALYLQ86SE5 291 aaKnown RBP8.84□□□□□ -0.99
UBR3-205ENST00000439681 ZNF444Q8N0Y2 327 aaPredicted RBP8.84□□□□□ -0.99
UBR3-205ENST00000439681 ESR2Q92731 530 aa8.84□□□□□ -0.99
UBR3-205ENST00000439681 ALDH8A1Q9H2A2 487 aaPredicted RBP8.84□□□□□ -0.99
UBR3-205ENST00000439681 ZNF287Q9HBT7 754 aa8.84□□□□□ -0.99
UBR3-205ENST00000439681 GPHNQ9NQX3 736 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms